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v. 2024_05_31_v2
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Typing
Plasmid NZ_CP062991.1
Sequence
Nucleotide Information
Accession
NZ_CP062991.1
Description
Klebsiella pneumoniae strain CriePir26 plasmid unnamed5, complete sequence
Source
refseq
Topology
linear
Length
4897 bp
GC Content
0.57 %
Created at NCBI
Oct. 13, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_009661485.2
Assembly Coverage
87
Biosample
Curated Collection Information
Accession
13153735
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
55.76N;37.62E
Original Query Type
coordinates
Coordinates (Lat/Lon)
55.76/37.62
Address
Maly Theatre, 1, Teatralniy Driveway, 2, 62, Tverskoy District, Moscow, Central Federal District, 109012, Russia
ECOSYSTEM
Original Query
Homo sapiens,traumatic discharge
Classification
host_associated
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
NZ_CP062989.1
NZ_CP062987.1
NZ_CP062990.1
NZ_CP062988.1
Similar Plasmids
based on Mash distance
NZ_AP024947.1
See Comparison
NZ_AP024409.1
See Comparison
AP022279.1
See Comparison
NZ_AP022286.1
See Comparison
NZ_AP023406.1
See Comparison
NZ_AP024947.1
See Comparison
OW849449.1
See Comparison
NZ_AP022286.1
See Comparison
AP022279.1
See Comparison
NZ_AP024409.1
See Comparison
NZ_CP062991.1
See Comparison
NZ_AP023406.1
See Comparison
NZ_AP024947.1
See Comparison
OW849449.1
See Comparison
NZ_AP023406.1
See Comparison
AP022279.1
See Comparison
NZ_AP024409.1
See Comparison
NZ_AP022286.1
See Comparison
AP022279.1
See Comparison
OW849449.1
See Comparison
NZ_AP024947.1
See Comparison
NZ_AP022286.1
See Comparison
NZ_AP024409.1
See Comparison
NZ_AP023406.1
See Comparison
NZ_AP024947.1
See Comparison
OW849449.1
See Comparison
AP022279.1
See Comparison
NZ_AP024947.1
See Comparison
NZ_AP024409.1
See Comparison
NZ_AP023406.1
See Comparison
OW849449.1
See Comparison
NZ_AP022286.1
See Comparison
AP022279.1
See Comparison
OW849449.1
See Comparison
NZ_AP023406.1
See Comparison
NZ_AP022286.1
See Comparison
NZ_AP024409.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
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Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
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Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore