Plasmid NZ_CP061657.1

Sequence

Nucleotide Information

Accession NZ_CP061657.1
Description Acinetobacter seifertii strain AS33 plasmid pAS33-2, complete sequence
Source refseq
Topology circular
Length 106890 bp
GC Content 0.39 %
Created at NCBI Sept. 28, 2020



Assembly

Genome Data Information

Accession GCF_014722535.1
Assembly Coverage 80


Biosample

Curated Collection Information

Accession 16092221

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Taiwan
Original Query Type name
Coordinates (Lat/Lon) 23.60/120.84
Address Taiwan

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query bloodstream infection
DOID/SYMP
  • Disease infectious agent (DOID:0050117 )
  • A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.

Visualization


Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP061830.1 See Comparison
NZ_CP061830.1 See Comparison
NZ_CP061569.1 See Comparison
NZ_CP061558.1 See Comparison
NZ_CP061651.1 See Comparison
NZ_CP061600.1 See Comparison
NZ_CP061670.1 See Comparison
NZ_CP061682.1 See Comparison
NZ_CP061667.1 See Comparison
NZ_CP061642.1 See Comparison
NZ_CP061631.1 See Comparison
NZ_CP061584.1 See Comparison
NZ_CP061679.1 See Comparison
NZ_CP061661.1 See Comparison
NZ_CP061636.1 See Comparison
NZ_CP061622.1 See Comparison
NZ_CP061593.1 See Comparison
NZ_CP061605.1 See Comparison
NZ_CP061685.1 See Comparison
NZ_CP061676.1 See Comparison
NZ_CP061615.1 See Comparison
NZ_CP061579.1 See Comparison
NZ_CP061569.1 See Comparison
NZ_CP061558.1 See Comparison
NZ_CP061651.1 See Comparison
NZ_CP061600.1 See Comparison
NZ_CP061670.1 See Comparison
NZ_CP061682.1 See Comparison
NZ_CP061667.1 See Comparison
NZ_CP061642.1 See Comparison
NZ_CP061631.1 See Comparison
NZ_CP061584.1 See Comparison
NZ_CP061679.1 See Comparison
NZ_CP061661.1 See Comparison
NZ_CP061636.1 See Comparison
NZ_CP061622.1 See Comparison
NZ_CP061593.1 See Comparison
NZ_CP061605.1 See Comparison
NZ_CP061685.1 See Comparison
NZ_CP061676.1 See Comparison
NZ_CP061615.1 See Comparison
NZ_CP061579.1 See Comparison
NZ_CP061569.1 See Comparison
NZ_CP061558.1 See Comparison
NZ_CP061651.1 See Comparison
NZ_CP061600.1 See Comparison
NZ_CP061670.1 See Comparison
NZ_CP061682.1 See Comparison
NZ_CP061667.1 See Comparison
NZ_CP061642.1 See Comparison
NZ_CP061631.1 See Comparison
NZ_CP061584.1 See Comparison
NZ_CP061679.1 See Comparison
NZ_CP061661.1 See Comparison
NZ_CP061636.1 See Comparison
NZ_CP061622.1 See Comparison
NZ_CP061593.1 See Comparison
NZ_CP061605.1 See Comparison
NZ_CP061685.1 See Comparison
NZ_CP061676.1 See Comparison
NZ_CP061615.1 See Comparison
NZ_CP061579.1 See Comparison
NZ_CP061569.1 See Comparison
NZ_CP061830.1 See Comparison
NZ_CP061558.1 See Comparison
NZ_CP061651.1 See Comparison
NZ_CP061600.1 See Comparison
NZ_CP061670.1 See Comparison
NZ_CP061682.1 See Comparison
NZ_CP061667.1 See Comparison
NZ_CP061642.1 See Comparison
NZ_CP061631.1 See Comparison
NZ_CP061584.1 See Comparison
NZ_CP061679.1 See Comparison
NZ_CP061661.1 See Comparison
NZ_CP061636.1 See Comparison
NZ_CP061622.1 See Comparison
NZ_CP061593.1 See Comparison
NZ_CP061605.1 See Comparison
NZ_CP061685.1 See Comparison
NZ_CP061676.1 See Comparison
NZ_CP061615.1 See Comparison
NZ_CP061579.1 See Comparison
NZ_CP061667.1 See Comparison
NZ_CP061830.1 See Comparison
NZ_CP061642.1 See Comparison
NZ_CP061631.1 See Comparison
NZ_CP061584.1 See Comparison
NZ_CP061679.1 See Comparison
NZ_CP061661.1 See Comparison
NZ_CP061636.1 See Comparison
NZ_CP061622.1 See Comparison
NZ_CP061593.1 See Comparison
NZ_CP061605.1 See Comparison
NZ_CP061685.1 See Comparison
NZ_CP061676.1 See Comparison
NZ_CP061615.1 See Comparison
NZ_CP061579.1 See Comparison
NZ_CP061830.1 See Comparison
NZ_CP061569.1 See Comparison
NZ_CP061558.1 See Comparison
NZ_CP061651.1 See Comparison
NZ_CP061600.1 See Comparison
NZ_CP061670.1 See Comparison
NZ_CP061682.1 See Comparison
NZ_CP061667.1 See Comparison
NZ_CP061642.1 See Comparison
NZ_CP061631.1 See Comparison
NZ_CP061584.1 See Comparison
NZ_CP061679.1 See Comparison
NZ_CP061661.1 See Comparison
NZ_CP061636.1 See Comparison
NZ_CP061622.1 See Comparison
NZ_CP061593.1 See Comparison
NZ_CP061605.1 See Comparison
NZ_CP061685.1 See Comparison
NZ_CP061676.1 See Comparison
NZ_CP061615.1 See Comparison
NZ_CP061579.1 See Comparison
NZ_CP061830.1 See Comparison
NZ_CP061569.1 See Comparison
NZ_CP061558.1 See Comparison
NZ_CP061651.1 See Comparison
NZ_CP061600.1 See Comparison
NZ_CP061670.1 See Comparison
NZ_CP061682.1 See Comparison
NZ_CP061830.1 See Comparison
NZ_CP061569.1 See Comparison
NZ_CP061558.1 See Comparison
NZ_CP061651.1 See Comparison
NZ_CP061600.1 See Comparison
NZ_CP061670.1 See Comparison
NZ_CP061657.1 See Comparison
NZ_CP061682.1 See Comparison
NZ_CP061667.1 See Comparison
NZ_CP061642.1 See Comparison
NZ_CP061631.1 See Comparison
NZ_CP061584.1 See Comparison
NZ_CP061679.1 See Comparison
NZ_CP061661.1 See Comparison
NZ_CP061636.1 See Comparison
NZ_CP061622.1 See Comparison
NZ_CP061593.1 See Comparison
NZ_CP061605.1 See Comparison
NZ_CP061685.1 See Comparison
NZ_CP061676.1 See Comparison
NZ_CP061615.1 See Comparison
NZ_CP061579.1 See Comparison


Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2