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v. 2024_05_31_v2
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Plasmid NZ_CP058206.1
Sequence
Nucleotide Information
Accession
NZ_CP058206.1
Description
Enterobacter roggenkampii strain RHBSTW-00002 plasmid pRHBSTW-00002_11, complete sequence
Source
refseq
Topology
circular
Length
2345 bp
GC Content
0.50 %
Created at NCBI
July 30, 2020
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Enterobacter roggenkampii (1812935)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Enterobacter (547)
Species
Enterobacter_roggenkampii (1812935)
Strain
Assembly
Genome Data Information
Accession
GCF_013635755.1
Assembly Coverage
95.5375
Biosample
Curated Collection Information
Accession
15148444
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
United Kingdom
Original Query Type
name
Coordinates (Lat/Lon)
54.70/-3.28
Address
United Kingdom
ECOSYSTEM
Original Query
culture,Wastewater influent sample
Classification
cell_culture,wastewater
Host-associated Taxon
DISEASE
Original Query
None
DOID/SYMP
Visualization
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Plasmids from same Biosample
NZ_CP058205.1
NZ_CP058204.1
NZ_CP058203.1
NZ_CP058202.1
NZ_CP058201.1
NZ_CP058200.1
NZ_CP058199.1
NZ_CP058198.1
NZ_CP058197.1
Similar Plasmids
based on Mash distance
NZ_CP058206.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
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Element Name
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NUCCORE ACC
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Sequence
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Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore