Plasmid NZ_CP035206.1

Sequence

Nucleotide Information

Accession NZ_CP035206.1
Description Klebsiella pneumoniae strain LH94 plasmid pLH94-2, complete sequence
Source refseq
Topology circular
Length 6364 bp
GC Content 0.50 %
Created at NCBI Oct. 31, 2019



Assembly

Genome Data Information

Accession GCF_009387775.1
Assembly Coverage 21


Biosample

Curated Collection Information
Accession 10740431

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 19.52N;102.10E
Original Query Type coordinates
Coordinates (Lat/Lon) 19.52/102.10
Address Xiengngeun District, Luang Prabang, 06000, Laos

ECOSYSTEM
Original Query Homo sapiens,stool
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query asymptomatic
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP041735.1 See Comparison
NZ_CP039273.1 See Comparison
NZ_CP038603.1 See Comparison
NZ_CP032843.1 See Comparison
NZ_CP039273.1 See Comparison
AP020334.1 See Comparison
NZ_CP047746.1 See Comparison
NZ_CP047761.1 See Comparison
NZ_CP117755.1 See Comparison
NZ_CP115692.1 See Comparison
NZ_CP041735.1 See Comparison
NZ_CP038603.1 See Comparison
AP020334.1 See Comparison
NZ_CP032843.1 See Comparison
NZ_CP047746.1 See Comparison
NZ_CP047761.1 See Comparison
NZ_CP115692.1 See Comparison
NZ_CP117755.1 See Comparison
NZ_CP115692.1 See Comparison
NZ_CP039273.1 See Comparison
NZ_CP038603.1 See Comparison
NZ_CP032843.1 See Comparison
NZ_CP047746.1 See Comparison
NZ_CP047761.1 See Comparison
NZ_CP117755.1 See Comparison
NZ_CP041735.1 See Comparison
NZ_CP047746.1 See Comparison
NZ_CP041735.1 See Comparison
AP020334.1 See Comparison
NZ_CP115692.1 See Comparison
NZ_CP039273.1 See Comparison
NZ_CP038603.1 See Comparison
NZ_CP032843.1 See Comparison
AP020334.1 See Comparison
NZ_CP047761.1 See Comparison
NZ_CP117755.1 See Comparison
NZ_CP039273.1 See Comparison
NZ_CP041735.1 See Comparison
NZ_CP038603.1 See Comparison
NZ_CP032843.1 See Comparison
NZ_CP115692.1 See Comparison
AP020334.1 See Comparison
NZ_CP117755.1 See Comparison
NZ_CP047746.1 See Comparison
NZ_CP047761.1 See Comparison
NZ_CP115692.1 See Comparison
NZ_CP039273.1 See Comparison
NZ_CP038603.1 See Comparison
NZ_CP032843.1 See Comparison
AP020334.1 See Comparison
NZ_CP047746.1 See Comparison
NZ_CP047761.1 See Comparison
NZ_CP117755.1 See Comparison
NZ_CP041735.1 See Comparison
NZ_CP035206.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore