Plasmid NZ_CP033956.1

Sequence

Nucleotide Information

Accession NZ_CP033956.1
Description Klebsiella pneumoniae strain L39_2 plasmid p3_L39, complete sequence
Source refseq
Topology circular
Length 133772 bp
GC Content 0.53 %
Created at NCBI June 29, 2019



Assembly

Genome Data Information

Accession GCF_006494895.1
Assembly Coverage 20


Biosample

Curated Collection Information

Accession 10433884

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 29.8N;118.2E
Original Query Type coordinates
Coordinates (Lat/Lon) 29.80/118.20
Address 北一路, Wan'an, Xiuning County, Huangshan, Anhui, China

ECOSYSTEM
Original Query Homo sapiens,stool
Classification fecal,gastrointestinal_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diarrhoea
DOID/SYMP
  • Diarrhea (DOID:13250 )
  • A gastrointestinal system disease described as the condition of having frequent loose or liquid bowel movements. Acute diarrhea is a common cause of death in developing countries and the second most common cause of infant deaths worldwide. The loss of fluids through diarrhea can cause severe dehydration which is one cause of death in diarrhea sufferers. Along with water, sufferers also lose dangerous amounts of important salts, electrolytes, and other nutrients. There are at least four types of diarrhea: secretory diarrhea, osmotic diarrhea, motility-related diarrhea, and inflammatory diarrhea.

Visualization




Similar Plasmids

based on Mash distance

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NZ_CP133403.1 See Comparison
NZ_CP132050.1 See Comparison
NZ_CP132044.1 See Comparison
NZ_CP130265.1 See Comparison
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NZ_CP054764.1 See Comparison
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NZ_CP054746.1 See Comparison
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NZ_CP054722.1 See Comparison
NZ_CP054776.1 See Comparison
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NZ_CP107347.1 See Comparison
NZ_CP116905.1 See Comparison
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NZ_CP031936.1 See Comparison
NZ_MN182746.1 See Comparison
NZ_CP107385.1 See Comparison
NZ_CP107329.1 See Comparison
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NZ_CP107322.1 See Comparison
NZ_CP107336.1 See Comparison
NZ_CP109950.1 See Comparison
NZ_CP106762.1 See Comparison
NZ_CP102838.1 See Comparison
NZ_CP104315.1 See Comparison
NZ_CP102639.1 See Comparison
NZ_CP101775.1 See Comparison
NZ_CP102392.1 See Comparison
NZ_CP087640.1 See Comparison
NZ_CP101785.1 See Comparison
NZ_CP090345.1 See Comparison
NZ_CP087625.1 See Comparison
NZ_CP095265.1 See Comparison
NZ_CP095242.1 See Comparison
CP076673.1 See Comparison
NZ_CP087144.1 See Comparison
NZ_CP087148.1 See Comparison
NZ_CP087153.1 See Comparison
NZ_CP092795.1 See Comparison
NZ_CP092788.1 See Comparison
NZ_CP090434.1 See Comparison
NZ_CP066153.1 See Comparison
NZ_CP084707.1 See Comparison
NZ_CP090464.1 See Comparison
NZ_CP055296.1 See Comparison
NZ_CP082755.1 See Comparison
NZ_CP082761.1 See Comparison
NZ_CP082767.1 See Comparison
NZ_CP080299.1 See Comparison
NZ_CP080311.1 See Comparison
NZ_CP080305.1 See Comparison
NZ_CP136269.1 See Comparison
NZ_CP041375.1 See Comparison
NZ_CP136845.1 See Comparison
NZ_CP154492.1 See Comparison
NZ_CP133403.1 See Comparison
NZ_CP132044.1 See Comparison
NZ_CP132050.1 See Comparison
NZ_CP130265.1 See Comparison
NZ_CP130259.1 See Comparison
NZ_CP154425.1 See Comparison
NZ_CP146851.1 See Comparison
NZ_CP146192.1 See Comparison
CP071162.1 See Comparison
NZ_CP142693.1 See Comparison
NZ_CP144305.1 See Comparison
NZ_CP141668.1 See Comparison
NZ_CP069172.1 See Comparison
NZ_CP054770.1 See Comparison
NZ_CP054722.1 See Comparison
NZ_CP054776.1 See Comparison
NZ_CP054782.1 See Comparison
NZ_CP054752.1 See Comparison
NZ_CP054764.1 See Comparison
NZ_CP054728.1 See Comparison
NZ_CP054746.1 See Comparison
NZ_MN182746.1 See Comparison
NZ_CP031936.1 See Comparison
NZ_CP107347.1 See Comparison
NZ_CP116905.1 See Comparison
NZ_CP107385.1 See Comparison
NZ_CP107374.1 See Comparison
CP107227.1 See Comparison
NZ_CP107329.1 See Comparison
NZ_CP107322.1 See Comparison
NZ_CP107336.1 See Comparison
NZ_CP109950.1 See Comparison
NZ_CP106762.1 See Comparison
NZ_CP102838.1 See Comparison
NZ_CP104315.1 See Comparison
NZ_CP102639.1 See Comparison
NZ_CP102392.1 See Comparison
NZ_CP090464.1 See Comparison
NZ_CP087640.1 See Comparison
NZ_CP087625.1 See Comparison
NZ_CP095265.1 See Comparison
NZ_CP095242.1 See Comparison
NZ_CP087144.1 See Comparison
NZ_CP087148.1 See Comparison
NZ_CP087153.1 See Comparison
NZ_CP092788.1 See Comparison
NZ_CP101785.1 See Comparison
NZ_CP090345.1 See Comparison
NZ_CP101775.1 See Comparison
CP076673.1 See Comparison
NZ_CP092795.1 See Comparison
NZ_CP090434.1 See Comparison
NZ_CP066153.1 See Comparison
NZ_CP082755.1 See Comparison
NZ_CP084707.1 See Comparison
NZ_CP082761.1 See Comparison
NZ_CP082767.1 See Comparison
NZ_CP080311.1 See Comparison
NZ_CP136269.1 See Comparison
NZ_CP055296.1 See Comparison
NZ_CP041375.1 See Comparison
NZ_CP136845.1 See Comparison
NZ_CP080305.1 See Comparison
NZ_CP080299.1 See Comparison
NZ_CP133403.1 See Comparison
NZ_CP154492.1 See Comparison
NZ_CP130265.1 See Comparison
NZ_CP132050.1 See Comparison
NZ_CP132044.1 See Comparison
NZ_CP130259.1 See Comparison
NZ_CP154425.1 See Comparison
NZ_CP142693.1 See Comparison
NZ_CP146851.1 See Comparison
NZ_CP146192.1 See Comparison
NZ_CP144305.1 See Comparison
NZ_CP141668.1 See Comparison
CP071162.1 See Comparison
NZ_CP054746.1 See Comparison
NZ_CP054782.1 See Comparison
NZ_CP054752.1 See Comparison
NZ_CP054770.1 See Comparison
NZ_CP054764.1 See Comparison
NZ_CP054722.1 See Comparison
NZ_CP054728.1 See Comparison
NZ_CP054776.1 See Comparison
NZ_CP107347.1 See Comparison
NZ_CP069172.1 See Comparison
NZ_MN182746.1 See Comparison
NZ_CP116905.1 See Comparison
NZ_CP107374.1 See Comparison
NZ_CP107329.1 See Comparison
NZ_CP031936.1 See Comparison
NZ_CP107385.1 See Comparison
NZ_CP107336.1 See Comparison
NZ_CP107322.1 See Comparison
NZ_CP109950.1 See Comparison
CP107227.1 See Comparison
NZ_CP101785.1 See Comparison
NZ_CP104315.1 See Comparison
NZ_CP102838.1 See Comparison
NZ_CP106762.1 See Comparison
NZ_CP102639.1 See Comparison
NZ_CP102392.1 See Comparison
NZ_CP090345.1 See Comparison
NZ_CP101775.1 See Comparison
NZ_CP087640.1 See Comparison
NZ_CP087625.1 See Comparison
NZ_CP095265.1 See Comparison
NZ_CP087144.1 See Comparison
NZ_CP095242.1 See Comparison
CP076673.1 See Comparison
NZ_CP087148.1 See Comparison
NZ_CP087153.1 See Comparison
NZ_CP092795.1 See Comparison
NZ_CP092788.1 See Comparison
NZ_CP090464.1 See Comparison
NZ_CP066153.1 See Comparison
NZ_CP090434.1 See Comparison
NZ_CP082755.1 See Comparison
NZ_CP084707.1 See Comparison
NZ_CP082761.1 See Comparison
NZ_CP082767.1 See Comparison
NZ_CP080305.1 See Comparison
NZ_CP080299.1 See Comparison
NZ_CP080311.1 See Comparison
NZ_CP041375.1 See Comparison
NZ_CP055296.1 See Comparison
NZ_CP136845.1 See Comparison
NZ_CP033956.1 See Comparison
NZ_CP136269.1 See Comparison
NZ_CP133403.1 See Comparison
NZ_CP154492.1 See Comparison
NZ_CP132050.1 See Comparison
NZ_CP132044.1 See Comparison
NZ_CP130265.1 See Comparison
NZ_CP130259.1 See Comparison
NZ_CP154425.1 See Comparison
NZ_CP146851.1 See Comparison
NZ_CP146192.1 See Comparison
CP071162.1 See Comparison
NZ_CP141668.1 See Comparison
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NZ_CP144305.1 See Comparison
NZ_CP054776.1 See Comparison
NZ_CP054782.1 See Comparison
NZ_CP054752.1 See Comparison
NZ_CP054764.1 See Comparison
NZ_CP054728.1 See Comparison
NZ_CP031936.1 See Comparison
NZ_CP054746.1 See Comparison
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NZ_CP054722.1 See Comparison
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NZ_CP116905.1 See Comparison
NZ_MN182746.1 See Comparison
NZ_CP107374.1 See Comparison
NZ_CP107385.1 See Comparison
NZ_CP107322.1 See Comparison
NZ_CP107347.1 See Comparison
NZ_CP107329.1 See Comparison
NZ_CP107336.1 See Comparison
NZ_CP106762.1 See Comparison
CP107227.1 See Comparison
NZ_CP109950.1 See Comparison
NZ_CP101785.1 See Comparison
NZ_CP102392.1 See Comparison
NZ_CP104315.1 See Comparison
NZ_CP102838.1 See Comparison
NZ_CP102639.1 See Comparison
NZ_CP090345.1 See Comparison
NZ_CP101775.1 See Comparison
NZ_CP087625.1 See Comparison
CP076673.1 See Comparison
NZ_CP095265.1 See Comparison
NZ_CP095242.1 See Comparison
NZ_CP132050.1 See Comparison
NZ_CP087640.1 See Comparison
NZ_CP087144.1 See Comparison
NZ_CP087148.1 See Comparison
NZ_CP087153.1 See Comparison
NZ_CP092795.1 See Comparison
NZ_CP092788.1 See Comparison
NZ_CP090464.1 See Comparison
NZ_CP090434.1 See Comparison
NZ_CP084707.1 See Comparison
NZ_CP041375.1 See Comparison
NZ_CP066153.1 See Comparison
NZ_CP082755.1 See Comparison
NZ_CP082761.1 See Comparison
NZ_CP082767.1 See Comparison
NZ_CP080305.1 See Comparison
NZ_CP080299.1 See Comparison
NZ_CP080311.1 See Comparison
NZ_CP055296.1 See Comparison
NZ_CP136845.1 See Comparison
NZ_CP136269.1 See Comparison
NZ_CP133403.1 See Comparison
NZ_CP132044.1 See Comparison
NZ_CP142693.1 See Comparison
NZ_CP154492.1 See Comparison
NZ_CP154425.1 See Comparison
NZ_CP146851.1 See Comparison
NZ_CP130265.1 See Comparison
NZ_CP130259.1 See Comparison
NZ_CP146192.1 See Comparison
NZ_CP144305.1 See Comparison
NZ_CP054764.1 See Comparison
NZ_CP141668.1 See Comparison
CP071162.1 See Comparison
NZ_CP054728.1 See Comparison
NZ_CP054776.1 See Comparison
NZ_CP054746.1 See Comparison
NZ_CP054770.1 See Comparison
NZ_CP054722.1 See Comparison
NZ_CP054782.1 See Comparison
NZ_CP031936.1 See Comparison
NZ_CP054752.1 See Comparison
NZ_CP069172.1 See Comparison
NZ_CP116905.1 See Comparison
NZ_MN182746.1 See Comparison
NZ_CP107374.1 See Comparison
NZ_CP107385.1 See Comparison
NZ_CP107329.1 See Comparison
NZ_CP107322.1 See Comparison
NZ_CP107347.1 See Comparison
NZ_CP107336.1 See Comparison
NZ_CP101785.1 See Comparison
CP107227.1 See Comparison
NZ_CP104315.1 See Comparison
NZ_CP102838.1 See Comparison
NZ_CP102639.1 See Comparison
NZ_CP109950.1 See Comparison
NZ_CP106762.1 See Comparison
NZ_CP102392.1 See Comparison
NZ_CP090345.1 See Comparison
NZ_CP101775.1 See Comparison
CP076673.1 See Comparison
NZ_CP087640.1 See Comparison
NZ_CP087625.1 See Comparison
NZ_CP095265.1 See Comparison
NZ_CP095242.1 See Comparison
NZ_CP087144.1 See Comparison
NZ_CP087148.1 See Comparison
NZ_CP087153.1 See Comparison
NZ_CP092795.1 See Comparison
NZ_CP092788.1 See Comparison
NZ_CP090464.1 See Comparison
NZ_CP066153.1 See Comparison
NZ_CP090434.1 See Comparison
NZ_CP055296.1 See Comparison
NZ_CP082755.1 See Comparison
NZ_CP082761.1 See Comparison
NZ_CP082767.1 See Comparison
NZ_CP080305.1 See Comparison
NZ_CP080299.1 See Comparison
NZ_CP080311.1 See Comparison
NZ_CP084707.1 See Comparison
NZ_CP136269.1 See Comparison
NZ_CP041375.1 See Comparison
NZ_CP136845.1 See Comparison
NZ_CP133403.1 See Comparison
NZ_CP154492.1 See Comparison
NZ_CP130265.1 See Comparison
NZ_CP130259.1 See Comparison
NZ_CP132050.1 See Comparison
NZ_CP132044.1 See Comparison
NZ_CP154425.1 See Comparison
NZ_CP146851.1 See Comparison
NZ_CP146192.1 See Comparison
NZ_CP054728.1 See Comparison
NZ_CP142693.1 See Comparison
NZ_CP141668.1 See Comparison
CP071162.1 See Comparison
NZ_CP144305.1 See Comparison
NZ_CP054782.1 See Comparison
NZ_CP054752.1 See Comparison
NZ_CP054764.1 See Comparison
NZ_CP054746.1 See Comparison
NZ_CP054770.1 See Comparison
NZ_CP054722.1 See Comparison
NZ_CP054776.1 See Comparison
NZ_CP069172.1 See Comparison
NZ_CP116905.1 See Comparison
NZ_MN182746.1 See Comparison
NZ_CP031936.1 See Comparison
NZ_CP107374.1 See Comparison
NZ_CP107385.1 See Comparison
NZ_CP107329.1 See Comparison
NZ_CP107347.1 See Comparison
NZ_CP107322.1 See Comparison
NZ_CP101785.1 See Comparison
NZ_CP109950.1 See Comparison
NZ_CP106762.1 See Comparison
NZ_CP102392.1 See Comparison
NZ_CP107336.1 See Comparison
CP107227.1 See Comparison
NZ_CP104315.1 See Comparison
NZ_CP102838.1 See Comparison
NZ_CP102639.1 See Comparison
NZ_CP090345.1 See Comparison
NZ_CP101775.1 See Comparison
CP076673.1 See Comparison
NZ_CP087640.1 See Comparison
NZ_CP095265.1 See Comparison
NZ_CP095242.1 See Comparison
NZ_CP087625.1 See Comparison
NZ_CP087144.1 See Comparison
NZ_CP087148.1 See Comparison
NZ_CP087153.1 See Comparison
NZ_CP092795.1 See Comparison
NZ_CP092788.1 See Comparison
NZ_CP090464.1 See Comparison
NZ_CP066153.1 See Comparison
NZ_CP090434.1 See Comparison
NZ_CP084707.1 See Comparison
NZ_CP082755.1 See Comparison
NZ_CP080305.1 See Comparison
NZ_CP080299.1 See Comparison
NZ_CP080311.1 See Comparison
NZ_CP082761.1 See Comparison
NZ_CP082767.1 See Comparison
NZ_CP055296.1 See Comparison
NZ_CP041375.1 See Comparison


Identical Plasmids

100% Sequence Identity



Plasmid Visualization


NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)

NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD

NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing


based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore