Plasmid NZ_CP024837.1

Sequence

Nucleotide Information

Accession NZ_CP024837.1
Description Klebsiella pneumoniae strain CRKP-2297 plasmid pCRKP-2297_3, complete sequence
Source refseq
Topology circular
Length 69628 bp
GC Content 0.52 %
Created at NCBI Nov. 22, 2017



Assembly

Genome Data Information

Accession GCF_002787755.1
Assembly Coverage 507


Biosample

Curated Collection Information
Accession 7944238

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query South Korea,Seoul
Original Query Type name
Coordinates (Lat/Lon) 37.57/126.98
Address South Korea,Seoul

ECOSYSTEM
Original Query Homo sapiens,Peritoneal fluid
Classification host_associated,peritoneum
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_OW970557.1 See Comparison
NZ_OW970361.1 See Comparison
NZ_OW970564.1 See Comparison
NZ_OW970417.1 See Comparison
NZ_OW970440.1 See Comparison
NZ_OW970533.1 See Comparison
NZ_OW970480.1 See Comparison
NZ_OW970516.1 See Comparison
NZ_OW970489.1 See Comparison
NZ_OW970456.1 See Comparison
NZ_OW970544.1 See Comparison
NZ_OW970496.1 See Comparison
NZ_OW970425.1 See Comparison
OW969776.1 See Comparison
OW967818.1 See Comparison
NZ_CP069205.1 See Comparison
NZ_CP021760.1 See Comparison
NZ_OW970417.1 See Comparison
NZ_CP024841.1 See Comparison
NZ_OW970557.1 See Comparison
NZ_OW970361.1 See Comparison
NZ_OW970440.1 See Comparison
NZ_OW970564.1 See Comparison
NZ_OW970544.1 See Comparison
NZ_OW970533.1 See Comparison
NZ_OW970480.1 See Comparison
NZ_OW970496.1 See Comparison
NZ_OW970425.1 See Comparison
NZ_OW970516.1 See Comparison
NZ_OW970489.1 See Comparison
NZ_OW970456.1 See Comparison
NZ_OW970440.1 See Comparison
OW969776.1 See Comparison
NZ_CP024841.1 See Comparison
OW967818.1 See Comparison
NZ_CP069205.1 See Comparison
NZ_CP021760.1 See Comparison
NZ_OW970361.1 See Comparison
NZ_OW970564.1 See Comparison
NZ_OW970533.1 See Comparison
NZ_OW970417.1 See Comparison
NZ_OW970480.1 See Comparison
NZ_OW970557.1 See Comparison
NZ_OW970516.1 See Comparison
NZ_OW970489.1 See Comparison
NZ_OW970456.1 See Comparison
NZ_OW970544.1 See Comparison
NZ_OW970496.1 See Comparison
NZ_OW970425.1 See Comparison
NZ_CP069205.1 See Comparison
OW969776.1 See Comparison
OW967818.1 See Comparison
NZ_OW970533.1 See Comparison
NZ_OW970361.1 See Comparison
NZ_OW970564.1 See Comparison
NZ_CP021760.1 See Comparison
NZ_CP024837.1 See Comparison
NZ_CP024841.1 See Comparison
NZ_OW970557.1 See Comparison
NZ_OW970480.1 See Comparison
NZ_OW970417.1 See Comparison
NZ_OW970516.1 See Comparison
NZ_OW970489.1 See Comparison
NZ_OW970496.1 See Comparison
NZ_OW970456.1 See Comparison
NZ_OW970544.1 See Comparison
NZ_OW970425.1 See Comparison
NZ_OW970440.1 See Comparison
NZ_CP069205.1 See Comparison
OW969776.1 See Comparison
OW967818.1 See Comparison
NZ_OW970557.1 See Comparison
NZ_CP021760.1 See Comparison
NZ_CP024841.1 See Comparison
NZ_OW970361.1 See Comparison
NZ_OW970564.1 See Comparison
NZ_OW970417.1 See Comparison
NZ_OW970533.1 See Comparison
NZ_OW970496.1 See Comparison
NZ_OW970480.1 See Comparison
NZ_OW970516.1 See Comparison
NZ_OW970489.1 See Comparison
NZ_OW970456.1 See Comparison
NZ_OW970425.1 See Comparison
NZ_OW970440.1 See Comparison
OW969776.1 See Comparison
NZ_OW970544.1 See Comparison
OW967818.1 See Comparison
NZ_OW970361.1 See Comparison
NZ_CP021760.1 See Comparison
NZ_CP069205.1 See Comparison
NZ_CP024841.1 See Comparison
NZ_OW970564.1 See Comparison
NZ_OW970480.1 See Comparison
NZ_OW970516.1 See Comparison
NZ_OW970489.1 See Comparison
NZ_OW970417.1 See Comparison
NZ_OW970456.1 See Comparison
NZ_OW970557.1 See Comparison
NZ_OW970440.1 See Comparison
NZ_OW970544.1 See Comparison
NZ_OW970533.1 See Comparison
NZ_OW970425.1 See Comparison
NZ_CP069205.1 See Comparison
OW969776.1 See Comparison
OW967818.1 See Comparison
NZ_OW970496.1 See Comparison
NZ_OW970480.1 See Comparison
NZ_CP021760.1 See Comparison
NZ_CP024841.1 See Comparison
NZ_OW970557.1 See Comparison
NZ_OW970361.1 See Comparison
NZ_OW970564.1 See Comparison
NZ_OW970417.1 See Comparison
NZ_OW970440.1 See Comparison
NZ_OW970516.1 See Comparison
NZ_OW970489.1 See Comparison
NZ_OW970533.1 See Comparison
NZ_OW970456.1 See Comparison
NZ_OW970425.1 See Comparison
NZ_OW970544.1 See Comparison
NZ_OW970496.1 See Comparison
NZ_CP021760.1 See Comparison
NZ_CP069205.1 See Comparison
OW969776.1 See Comparison
OW967818.1 See Comparison
NZ_CP024841.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2