Plasmid NZ_AP018812.1

Sequence

Nucleotide Information

Accession NZ_AP018812.1
Description Escherichia coli strain E2865 plasmid pE2865-4, complete sequence
Source refseq
Topology circular
Length 62235 bp
GC Content 0.43 %
Created at NCBI Dec. 28, 2018



Assembly

Genome Data Information

Accession GCF_003966465.1
Assembly Coverage 161


Biosample

Curated Collection Information
Accession 9729569

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Japan
Original Query Type name
Coordinates (Lat/Lon) 36.57/139.24
Address Japan

ECOSYSTEM
Original Query Bos taurus
Classification host_associated
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_MT929283.1 See Comparison
NZ_MN746291.1 See Comparison
AP027410.1 See Comparison
NZ_OP434482.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KY471312.1 See Comparison
NZ_KX580716.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_KY471313.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363995.1 See Comparison
AP027410.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_OP434482.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KY471312.1 See Comparison
NZ_KY471313.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_KX580716.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_OP434482.1 See Comparison
AP027410.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KY471312.1 See Comparison
NZ_KY471313.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_KX580716.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_AP027443.1 See Comparison
AP027410.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_OP434482.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_KY471312.1 See Comparison
NZ_KY471313.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KX580716.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_OP434482.1 See Comparison
AP027410.1 See Comparison
NZ_AP027443.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_CP047014.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_KY471312.1 See Comparison
NZ_KY471313.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KX580716.1 See Comparison
NZ_MT929283.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_CP051226.1 See Comparison
NZ_CP047014.1 See Comparison
AP027410.1 See Comparison
LC712384.1 See Comparison
LC712329.1 See Comparison
LC709173.1 See Comparison
NZ_MN746291.1 See Comparison
NZ_OP434482.1 See Comparison
NZ_CP032081.1 See Comparison
NZ_AP027443.1 See Comparison
NZ_AP018812.1 See Comparison
NZ_CP129275.1 See Comparison
NZ_MH522416.1 See Comparison
NZ_AP027636.1 See Comparison
NZ_AP027497.1 See Comparison
NZ_AP018412.1 See Comparison
NZ_CP126510.1 See Comparison
NZ_LC473131.1 See Comparison
NZ_LC469775.1 See Comparison
NZ_MH522415.1 See Comparison
NZ_MG594799.1 See Comparison
NZ_KY471312.1 See Comparison
NZ_KY795977.1 See Comparison
NZ_MG598815.1 See Comparison
NZ_KY471309.1 See Comparison
NZ_KY471313.1 See Comparison
NZ_KY120366.1 See Comparison
NZ_KU934208.1 See Comparison
NZ_KX580716.1 See Comparison
NZ_KY363994.1 See Comparison
NZ_KY363995.1 See Comparison
NZ_CP051226.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore