PLSDB
v. 2024_05_31_v2
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Typing
Plasmid NC_016840.1
Sequence
Nucleotide Information
Accession
NC_016840.1
Description
Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS4, complete sequence
Source
refseq
Topology
circular
Length
3751 bp
GC Content
0.52 %
Created at NCBI
March 1, 2012
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae subsp. pneumoniae HS11286 (1125630)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 (1125630)
Assembly
Genome Data Information
Accession
GCF_000240185.1
Assembly Coverage
None
Similar Plasmids
based on Mash distance
NZ_CP126787.1
See Comparison
NZ_CP126782.1
See Comparison
CP133392.1
See Comparison
NZ_CP128985.1
See Comparison
CP056981.1
See Comparison
NZ_OX359178.1
See Comparison
NZ_OX359186.1
See Comparison
NZ_CP103776.1
See Comparison
NZ_CP039601.1
See Comparison
AP026453.1
See Comparison
CP003226.1
See Comparison
NZ_CP126787.1
See Comparison
NZ_CP126782.1
See Comparison
CP133392.1
See Comparison
NZ_CP128985.1
See Comparison
CP056981.1
See Comparison
AP026453.1
See Comparison
NZ_OX359178.1
See Comparison
NZ_OX359186.1
See Comparison
NZ_CP103776.1
See Comparison
CP133392.1
See Comparison
CP003226.1
See Comparison
NZ_CP039601.1
See Comparison
NZ_CP126787.1
See Comparison
NZ_CP126782.1
See Comparison
CP003226.1
See Comparison
NZ_CP128985.1
See Comparison
CP056981.1
See Comparison
NZ_OX359178.1
See Comparison
NZ_OX359186.1
See Comparison
NZ_CP103776.1
See Comparison
AP026453.1
See Comparison
CP133392.1
See Comparison
NZ_CP039601.1
See Comparison
NZ_CP126787.1
See Comparison
NZ_CP126782.1
See Comparison
NZ_OX359178.1
See Comparison
AP026453.1
See Comparison
NZ_CP128985.1
See Comparison
CP056981.1
See Comparison
NZ_CP103776.1
See Comparison
NZ_OX359186.1
See Comparison
CP003226.1
See Comparison
NZ_CP039601.1
See Comparison
NZ_CP126782.1
See Comparison
NZ_CP126787.1
See Comparison
NZ_CP128985.1
See Comparison
CP133392.1
See Comparison
CP056981.1
See Comparison
NZ_OX359178.1
See Comparison
NZ_OX359186.1
See Comparison
NZ_CP103776.1
See Comparison
AP026453.1
See Comparison
CP003226.1
See Comparison
NZ_CP039601.1
See Comparison
CP133392.1
See Comparison
NZ_CP126787.1
See Comparison
NZ_CP126782.1
See Comparison
NZ_CP128985.1
See Comparison
NZ_OX359178.1
See Comparison
CP056981.1
See Comparison
NZ_OX359186.1
See Comparison
AP026453.1
See Comparison
NZ_CP103776.1
See Comparison
NC_016840.1
See Comparison
CP003226.1
See Comparison
NZ_CP039601.1
See Comparison
Identical Plasmids
100% Sequence Identity
CP133392.1
Sequence
Accession
:
CP133392.1
Description
: Klebsiella pneumoniae strain KLB_MDR_391377 plasmid p377C3, complete sequence
Source
: insd
Created at NCBI
: Sept. 3, 2023
Host Taxonomy
Assigned Host
:
Klebsiella pneumoniae (573)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Klebsiella (570)
Species
:
Klebsiella_pneumoniae (573)
Strain
:
CP003226.1
Sequence
Accession
:
CP003226.1
Description
: Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS4, complete sequence
Source
: insd
Created at NCBI
: Dec. 27, 2011
Host Taxonomy
Assigned Host
:
Klebsiella pneumoniae subsp. pneumoniae HS11286 (1125630)
Superkingdom
:
Bacteria (2)
Phylum
:
Pseudomonadota (1224)
Class
:
Gammaproteobacteria (1236)
Order
:
Enterobacterales (91347)
Family
:
Enterobacteriaceae (543)
Genus
:
Klebsiella (570)
Species
:
Klebsiella_pneumoniae (573)
Strain
:
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 (1125630)
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
Display
Sequence
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NUCCORE ACC
Source
Element Name
Display
Sequence
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Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore