Plasmid NC_002108.1

Sequence

Nucleotide Information

Accession NC_002108.1
Description Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB2062, complete sequence
Source refseq
Topology circular
Length 2062 bp
GC Content 0.35 %
Created at NCBI March 12, 1998



Biosample

Curated Collection Information
Accession 14224624

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query None
Original Query Type None
Coordinates (Lat/Lon)
Address None

ECOSYSTEM
Original Query None
Classification None
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON



Similar Plasmids

based on Mash distance

NZ_DQ185141.1 See Comparison
NZ_HM991869.1 See Comparison
NZ_DQ185138.1 See Comparison
NZ_CP116316.1 See Comparison
NZ_CP004859.1 See Comparison
NZ_CP083115.1 See Comparison
NZ_CP083128.1 See Comparison
NZ_CP004878.1 See Comparison
NC_018885.1 See Comparison
NC_019228.1 See Comparison
NC_019227.1 See Comparison
NC_017197.1 See Comparison
NC_017213.1 See Comparison
NZ_CP116316.1 See Comparison
NZ_CP004859.1 See Comparison
NC_018885.1 See Comparison
NC_017197.1 See Comparison
NC_017213.1 See Comparison
NZ_DQ185141.1 See Comparison
NZ_HM991869.1 See Comparison
NZ_DQ185138.1 See Comparison
NZ_DQ185141.1 See Comparison
NZ_HM991869.1 See Comparison
NZ_DQ185138.1 See Comparison
NZ_CP116316.1 See Comparison
NZ_CP083115.1 See Comparison
NZ_CP083128.1 See Comparison
NZ_CP004878.1 See Comparison
NC_019228.1 See Comparison
NC_019227.1 See Comparison
NZ_CP083115.1 See Comparison
NZ_CP083128.1 See Comparison
NZ_CP004878.1 See Comparison
NC_019228.1 See Comparison
NZ_CP004859.1 See Comparison
NC_019227.1 See Comparison
NZ_DQ185141.1 See Comparison
NC_018885.1 See Comparison
NC_017197.1 See Comparison
NC_017213.1 See Comparison
NZ_HM991869.1 See Comparison
NZ_DQ185138.1 See Comparison
NZ_DQ185141.1 See Comparison
NZ_CP083115.1 See Comparison
NZ_CP083128.1 See Comparison
NZ_CP004859.1 See Comparison
NC_018885.1 See Comparison
NC_017197.1 See Comparison
NC_017213.1 See Comparison
NZ_CP116316.1 See Comparison
NZ_CP004878.1 See Comparison
NC_019228.1 See Comparison
NC_019227.1 See Comparison
NZ_HM991869.1 See Comparison
NZ_DQ185138.1 See Comparison
NZ_CP083115.1 See Comparison
NZ_CP116316.1 See Comparison
NZ_CP083128.1 See Comparison
NZ_CP004859.1 See Comparison
NZ_CP004878.1 See Comparison
NC_018885.1 See Comparison
NC_019228.1 See Comparison
NC_019227.1 See Comparison
NC_017197.1 See Comparison
NC_017213.1 See Comparison
NZ_DQ185141.1 See Comparison
NC_002108.1 See Comparison
NZ_HM991869.1 See Comparison
NZ_DQ185138.1 See Comparison
NZ_CP116316.1 See Comparison
NZ_CP083115.1 See Comparison
NZ_CP083128.1 See Comparison
NZ_CP004859.1 See Comparison
NZ_CP004878.1 See Comparison
NC_018885.1 See Comparison
NC_019228.1 See Comparison
NC_019227.1 See Comparison
NC_017197.1 See Comparison
NC_017213.1 See Comparison
NZ_DQ185141.1 See Comparison
NZ_HM991869.1 See Comparison
NZ_DQ185138.1 See Comparison
NZ_CP116316.1 See Comparison
NZ_CP083115.1 See Comparison
NZ_CP083128.1 See Comparison
NZ_CP004859.1 See Comparison
NZ_CP004878.1 See Comparison
NC_018885.1 See Comparison
NC_019228.1 See Comparison
NC_019227.1 See Comparison
NC_017197.1 See Comparison
NC_017213.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2