Plasmid LR890592.1

Sequence

Nucleotide Information

Accession LR890592.1
Description Klebsiella pneumoniae isolate INF154-sc-2279998 genome assembly, plasmid: 6
Source insd
Topology circular
Length 4667 bp
GC Content 0.51 %
Created at NCBI Oct. 30, 2020



Biosample

Curated Collection Information
Accession 4042636

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query Australia
Original Query Type name
Coordinates (Lat/Lon) -24.78/134.76
Address Australia

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query diseased
DOID/SYMP
  • Disease (DOID:4 )
    • A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP085869.1 See Comparison
NZ_CP019843.1 See Comparison
NZ_CP027141.1 See Comparison
NZ_CP056152.1 See Comparison
NZ_CP056763.1 See Comparison
NZ_CP058115.1 See Comparison
CP056479.1 See Comparison
CP052874.1 See Comparison
NZ_CP045315.1 See Comparison
NZ_AP022668.1 See Comparison
NZ_CP056152.1 See Comparison
LR890482.1 See Comparison
NZ_CP085869.1 See Comparison
NZ_CP027141.1 See Comparison
NZ_AP022131.1 See Comparison
NZ_AP021979.1 See Comparison
NZ_CP056204.1 See Comparison
NZ_CP019843.1 See Comparison
NZ_CP056763.1 See Comparison
NZ_CP045315.1 See Comparison
NZ_CP058115.1 See Comparison
CP056479.1 See Comparison
CP052874.1 See Comparison
NZ_AP022668.1 See Comparison
NZ_CP085869.1 See Comparison
LR890592.1 See Comparison
LR890482.1 See Comparison
NZ_AP022131.1 See Comparison
NZ_AP021979.1 See Comparison
NZ_CP056204.1 See Comparison
NZ_CP058115.1 See Comparison
NZ_CP027141.1 See Comparison
NZ_CP056152.1 See Comparison
NZ_CP056763.1 See Comparison
CP056479.1 See Comparison
NZ_CP019843.1 See Comparison
CP052874.1 See Comparison
NZ_CP045315.1 See Comparison
NZ_AP022668.1 See Comparison
LR890482.1 See Comparison
NZ_CP056204.1 See Comparison
NZ_AP022131.1 See Comparison
NZ_AP021979.1 See Comparison
NZ_CP085869.1 See Comparison
NZ_CP058115.1 See Comparison
NZ_CP019843.1 See Comparison
NZ_CP027141.1 See Comparison
NZ_CP056152.1 See Comparison
NZ_CP056763.1 See Comparison
CP056479.1 See Comparison
LR890482.1 See Comparison
CP052874.1 See Comparison
NZ_CP045315.1 See Comparison
NZ_AP022668.1 See Comparison
NZ_CP056204.1 See Comparison
NZ_CP085869.1 See Comparison
NZ_CP056152.1 See Comparison
NZ_CP056763.1 See Comparison
NZ_CP045315.1 See Comparison
NZ_AP022668.1 See Comparison
LR890482.1 See Comparison
NZ_AP022131.1 See Comparison
NZ_AP021979.1 See Comparison
NZ_CP019843.1 See Comparison
NZ_CP027141.1 See Comparison
NZ_CP058115.1 See Comparison
CP056479.1 See Comparison
CP052874.1 See Comparison
NZ_AP022131.1 See Comparison
NZ_AP021979.1 See Comparison
NZ_CP019843.1 See Comparison
NZ_CP085869.1 See Comparison
NZ_CP056204.1 See Comparison
CP052874.1 See Comparison
NZ_CP027141.1 See Comparison
CP056479.1 See Comparison
NZ_CP056152.1 See Comparison
NZ_CP056763.1 See Comparison
NZ_CP058115.1 See Comparison
NZ_CP045315.1 See Comparison
NZ_AP022668.1 See Comparison
NZ_AP022131.1 See Comparison
NZ_AP021979.1 See Comparison
NZ_CP056204.1 See Comparison
LR890482.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore