Plasmid CP149528.1

Sequence

Nucleotide Information

Accession CP149528.1
Description Salmonella enterica subsp. enterica serovar Cerro str. 818 plasmid pCFSAN001330_06, complete sequence
Source insd
Topology circular
Length 2647 bp
GC Content 0.54 %
Created at NCBI March 21, 2024



Assembly

Genome Data Information

Accession GCA_000487275.2
Assembly Coverage 600


Biosample

Curated Collection Information
Accession 1805334

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,PA
Original Query Type name
Coordinates (Lat/Lon) 40.97/-77.73
Address USA,PA

ECOSYSTEM
Original Query animal,fecal (Bos taurus)
Classification fecal,host_associated
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP149528.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore