Plasmid CP146578.1

Sequence

Nucleotide Information

Accession CP146578.1
Description Klebsiella pneumoniae strain B1.S1.5 plasmid pB1.S1.5.c5, complete sequence
Source insd
Topology circular
Length 16563 bp
GC Content 0.57 %
Created at NCBI March 9, 2024



Assembly

Genome Data Information

Accession GCA_037082035.1
Assembly Coverage 91




Similar Plasmids

based on Mash distance

NZ_CP110910.1 See Comparison
NZ_CP110901.1 See Comparison
NZ_CP110897.1 See Comparison
NZ_CP104458.1 See Comparison
OW968083.1 See Comparison
OW967903.1 See Comparison
NZ_CP095148.1 See Comparison
NZ_CP073312.1 See Comparison
OW968083.1 See Comparison
NZ_CP110910.1 See Comparison
NZ_CP110901.1 See Comparison
NZ_CP110897.1 See Comparison
NZ_CP104458.1 See Comparison
NZ_CP095148.1 See Comparison
NZ_CP095148.1 See Comparison
NZ_CP110910.1 See Comparison
NZ_CP110901.1 See Comparison
NZ_CP110897.1 See Comparison
OW968083.1 See Comparison
OW967903.1 See Comparison
NZ_CP073312.1 See Comparison
NZ_CP104458.1 See Comparison
OW967903.1 See Comparison
NZ_CP095148.1 See Comparison
OW968083.1 See Comparison
NZ_CP073312.1 See Comparison
CP146578.1 See Comparison
NZ_CP110910.1 See Comparison
NZ_CP110901.1 See Comparison
NZ_CP110897.1 See Comparison
NZ_CP104458.1 See Comparison
OW967903.1 See Comparison
NZ_CP110910.1 See Comparison
NZ_CP073312.1 See Comparison
NZ_CP110901.1 See Comparison
NZ_CP110897.1 See Comparison
OW967903.1 See Comparison
NZ_CP104458.1 See Comparison
OW968083.1 See Comparison
NZ_CP104458.1 See Comparison
NZ_CP073312.1 See Comparison
NZ_CP110910.1 See Comparison
NZ_CP110901.1 See Comparison
NZ_CP110897.1 See Comparison
NZ_CP095148.1 See Comparison
OW967903.1 See Comparison
OW968083.1 See Comparison
NZ_CP095148.1 See Comparison
NZ_CP110910.1 See Comparison
NZ_CP110901.1 See Comparison
NZ_CP110897.1 See Comparison
NZ_CP104458.1 See Comparison
OW968083.1 See Comparison
OW967903.1 See Comparison
NZ_CP073312.1 See Comparison
NZ_CP073312.1 See Comparison
NZ_CP095148.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore


Detected typing markers by plasmidfinder
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2
NUCCORE ACC Typing Identity Coverage Start End Strand HSP length Template length Position in ref Positions in Contig Note Accession Hit id Organism L1 Organism L2