Plasmid CP082499.1

Sequence

Nucleotide Information

Accession CP082499.1
Description Salmonella enterica subsp. enterica serovar 4,[5],12:i:- strain FSIS1607481 plasmid pF18S014-3, complete sequence
Source insd
Topology circular
Length 3373 bp
GC Content 0.55 %
Created at NCBI Sept. 2, 2021



Assembly

Genome Data Information

Accession GCA_010503935.2
Assembly Coverage 158


Biosample

Curated Collection Information
Accession 5720502

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,WI
Original Query Type name
Coordinates (Lat/Lon) 44.43/-89.69
Address USA,WI

ECOSYSTEM
Original Query animal-cattle-steer
Classification host_associated
Host-associated Taxon

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

CP082499.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore