Plasmid CP067666.1

Sequence

Nucleotide Information

Accession CP067666.1
Description Klebsiella pneumoniae strain ARLG-4403 plasmid pC4697_2, complete sequence
Source insd
Topology circular
Length 203864 bp
GC Content 0.53 %
Created at NCBI March 1, 2022



Assembly

Genome Data Information

Accession GCF_022435585.1
Assembly Coverage 168


Biosample

Curated Collection Information
Accession 15868500

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query USA,South
Original Query Type name
Coordinates (Lat/Lon) 33.31/-118.34
Address USA,South

ECOSYSTEM
Original Query Homo sapiens,urine
Classification host_associated,urinary_system
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query None
DOID/SYMP

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP109734.1 See Comparison
NZ_CP115616.1 See Comparison
NZ_CP114566.1 See Comparison
NZ_CP114566.1 See Comparison
NZ_CP104842.1 See Comparison
CP067958.1 See Comparison
CP067666.1 See Comparison
NZ_CP109734.1 See Comparison
NZ_CP021835.1 See Comparison
NZ_CP018956.1 See Comparison
NZ_CP025147.1 See Comparison
NZ_CP025144.1 See Comparison
NZ_CP025141.1 See Comparison
NZ_CP115616.1 See Comparison
NZ_CP104842.1 See Comparison
CP067958.1 See Comparison
NZ_CP021835.1 See Comparison
NZ_CP018956.1 See Comparison
NZ_CP109734.1 See Comparison
NZ_CP025147.1 See Comparison
NZ_CP025144.1 See Comparison
NZ_CP025141.1 See Comparison
NZ_CP114566.1 See Comparison
NZ_CP115616.1 See Comparison
NZ_CP104842.1 See Comparison
NZ_CP018956.1 See Comparison
NZ_CP021835.1 See Comparison
CP067958.1 See Comparison
NZ_CP109734.1 See Comparison
NZ_CP025147.1 See Comparison
NZ_CP025144.1 See Comparison
NZ_CP025141.1 See Comparison
NZ_CP114566.1 See Comparison
NZ_CP115616.1 See Comparison
NZ_CP104842.1 See Comparison
NZ_CP021835.1 See Comparison
CP067958.1 See Comparison
NZ_CP018956.1 See Comparison
NZ_CP025147.1 See Comparison
NZ_CP025144.1 See Comparison
NZ_CP025141.1 See Comparison
NZ_CP115616.1 See Comparison
NZ_CP114566.1 See Comparison
NZ_CP104842.1 See Comparison
NZ_CP018956.1 See Comparison
NZ_CP109734.1 See Comparison
CP067958.1 See Comparison
NZ_CP021835.1 See Comparison
NZ_CP114566.1 See Comparison
NZ_CP025147.1 See Comparison
NZ_CP025144.1 See Comparison
NZ_CP025141.1 See Comparison
NZ_CP109734.1 See Comparison
NZ_CP115616.1 See Comparison
NZ_CP025147.1 See Comparison
NZ_CP104842.1 See Comparison
CP067958.1 See Comparison
NZ_CP021835.1 See Comparison
NZ_CP018956.1 See Comparison
NZ_CP025144.1 See Comparison
NZ_CP025141.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore