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v. 2024_05_31_v2
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Typing
Plasmid CP067444.1
Sequence
Nucleotide Information
Accession
CP067444.1
Description
Klebsiella pneumoniae strain ARLG-4624 plasmid pC962_2, complete sequence
Source
insd
Topology
circular
Length
54244 bp
GC Content
0.52 %
Created at NCBI
March 1, 2022
Host Taxonomy
According to NCBI Taxonomy
Assigned Host
Klebsiella pneumoniae (573)
Lineage
Superkingdom
Bacteria (2)
Phylum
Pseudomonadota (1224)
Class
Gammaproteobacteria (1236)
Order
Enterobacterales (91347)
Family
Enterobacteriaceae (543)
Genus
Klebsiella (570)
Species
Klebsiella_pneumoniae (573)
Strain
Assembly
Genome Data Information
Accession
GCF_022433365.1
Assembly Coverage
472
Biosample
Curated Collection Information
Accession
15868682
PLASMID INFORMATION
GEOGRAPHICAL INFORMATION
Original Query
USA,Midwest
Original Query Type
name
Coordinates (Lat/Lon)
43.41/-106.28
Address
USA,Midwest
ECOSYSTEM
Original Query
Homo sapiens,urine
Classification
host_associated,urinary_system
Host-associated Taxon
Homo sapiens (
9606
)
DISEASE
Original Query
None
DOID/SYMP
Visualization
PNG
JSON
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Plasmids from same Biosample
CP067447.1
CP067446.1
CP067445.1
CP067443.1
Similar Plasmids
based on Mash distance
NZ_OP378665.1
See Comparison
NZ_OP378605.1
See Comparison
NZ_CP091053.1
See Comparison
NZ_OP378665.1
See Comparison
CP027617.1
See Comparison
NZ_OP378665.1
See Comparison
NZ_OP378605.1
See Comparison
CP027617.1
See Comparison
NZ_CP091053.1
See Comparison
NZ_OP378605.1
See Comparison
NZ_CP091053.1
See Comparison
CP067444.1
See Comparison
CP027617.1
See Comparison
CP027617.1
See Comparison
NZ_OP378665.1
See Comparison
NZ_OP378605.1
See Comparison
NZ_CP091053.1
See Comparison
CP027617.1
See Comparison
NZ_CP091053.1
See Comparison
NZ_OP378665.1
See Comparison
NZ_OP378605.1
See Comparison
NZ_OP378665.1
See Comparison
NZ_OP378605.1
See Comparison
NZ_CP091053.1
See Comparison
CP027617.1
See Comparison
Plasmid Visualization
JSON
GENBANK
NUCCORE ACC
Source
Element Name
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NUCCORE ACC
Source
Element Name
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Sequence
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Annotations
based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
NUCCORE ACC
Gene
Locus Tag
Product
Protein id
Codon Start
Translation Table
GO process
Typing
based on MOB-Typer and Plasmid Multilocus Sequencing Typing (
PMLST
)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
NUCCORE ACC
Contigs
md5 hash
Replicon Type
Relaxase Type
MPF Type
OriT Type
Predicted Mobility
Primary Cluster ID
Secondary Cluster ID
Observed Host Range Ncbi Rank
Observed Host Range Ncbi Name
Mash Nearest Neighbor
Mash Neighbor Distance
Mash Neighbor Identification
Reported Host Range Lit Rank
Reported Host Range Lit Name
Replicon Type Accession
Relaxase Type Accession
MPF Type Accession
OriT Type Accession
Associated PMID(s)
BLAST results of detected typing markers by MOB-type
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore
NUCCORE ACC
biomarker
MOB-suite ID
Element
Start
End
Strand
Identity
Coverage
Evalue
Bitscore