Plasmid CP052588.1

Sequence

Nucleotide Information

Accession CP052588.1
Description Klebsiella pneumoniae strain F16KP0070 plasmid pF16KP0070-2, complete sequence
Source insd
Topology circular
Length 3991 bp
GC Content 0.44 %
Created at NCBI May 4, 2020



Biosample

Curated Collection Information
Accession 14609962

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 35.18N;129.08E
Original Query Type coordinates
Coordinates (Lat/Lon) 35.18/129.08
Address 중앙천로73번길, Yeonsan 2(i)-dong, Yeonje-gu, Busan, 47599, South Korea

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Bloodstream infection
DOID/SYMP
  • Disease infectious agent (DOID:0050117 )
    • A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP036325.1 See Comparison
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CP052149.1 See Comparison
NZ_CP068141.1 See Comparison
CP052508.1 See Comparison
CP052501.1 See Comparison
CP052442.1 See Comparison
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NZ_CP047706.1 See Comparison
NZ_CP109610.1 See Comparison
NZ_CP063746.1 See Comparison
NZ_CP063146.1 See Comparison
NZ_CP097195.1 See Comparison
NZ_CP104201.1 See Comparison
OX030722.1 See Comparison
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NZ_CP103588.1 See Comparison
OX030712.1 See Comparison
NZ_CP097414.1 See Comparison
OX030753.1 See Comparison
NZ_CP097418.1 See Comparison
OW969771.1 See Comparison
OW969921.1 See Comparison
OW968438.1 See Comparison
OW969843.1 See Comparison
OW969685.1 See Comparison
OW969652.1 See Comparison
OW968377.1 See Comparison
OW968368.1 See Comparison
OW968462.1 See Comparison
OW968270.1 See Comparison
OW968037.1 See Comparison
OW968263.1 See Comparison
OW968219.1 See Comparison
OW968123.1 See Comparison
OW967773.1 See Comparison
OW967871.1 See Comparison
OW849424.1 See Comparison
OW967372.1 See Comparison
OW849339.1 See Comparison
OW849398.1 See Comparison
OW849187.1 See Comparison
NZ_CP043593.1 See Comparison
OW849224.1 See Comparison
NZ_CP086469.1 See Comparison
CP067965.1 See Comparison
NZ_CP086457.1 See Comparison
NZ_CP086460.1 See Comparison
NZ_CP086463.1 See Comparison
NZ_CP086466.1 See Comparison
CP067955.1 See Comparison
CP067478.1 See Comparison
CP067708.1 See Comparison
CP067677.1 See Comparison
CP067670.1 See Comparison
CP067662.1 See Comparison
CP067453.1 See Comparison
NZ_CP079689.1 See Comparison
NZ_CP084989.1 See Comparison
NZ_CP073629.1 See Comparison
NZ_CP079614.1 See Comparison
CP052149.1 See Comparison
NZ_CP075289.1 See Comparison
NZ_CP067258.1 See Comparison
NZ_CP036325.1 See Comparison
NZ_CP095564.1 See Comparison
CP052508.1 See Comparison
CP052501.1 See Comparison
CP052442.1 See Comparison
NZ_CP103678.1 See Comparison
NZ_CP068141.1 See Comparison
NZ_AP023458.1 See Comparison
NZ_CP047706.1 See Comparison
NZ_CP063746.1 See Comparison
NZ_CP063146.1 See Comparison
NZ_CP097195.1 See Comparison
NZ_CP109610.1 See Comparison
NZ_CP104201.1 See Comparison
NZ_CP103588.1 See Comparison
OX030753.1 See Comparison
OX030712.1 See Comparison
OX030722.1 See Comparison
NZ_CP097414.1 See Comparison
NZ_CP097418.1 See Comparison
OW969771.1 See Comparison
OW969685.1 See Comparison
OW969921.1 See Comparison
OW969843.1 See Comparison
OW968438.1 See Comparison
OW969652.1 See Comparison
OW968377.1 See Comparison
OW968368.1 See Comparison
OW968462.1 See Comparison
OW968270.1 See Comparison
OW968263.1 See Comparison
OW968037.1 See Comparison
OW968219.1 See Comparison
OW968123.1 See Comparison
OW967773.1 See Comparison
OW967871.1 See Comparison
OW849424.1 See Comparison
OW967372.1 See Comparison
OW849398.1 See Comparison
OW849339.1 See Comparison
OW849187.1 See Comparison
NZ_CP043593.1 See Comparison
OW849224.1 See Comparison
NZ_CP086457.1 See Comparison
NZ_CP086460.1 See Comparison
NZ_CP086469.1 See Comparison
NZ_CP086463.1 See Comparison
CP067708.1 See Comparison
NZ_CP086466.1 See Comparison
CP067965.1 See Comparison
CP067955.1 See Comparison
CP067677.1 See Comparison
CP067670.1 See Comparison
CP067662.1 See Comparison
NZ_CP036325.1 See Comparison
CP067478.1 See Comparison
CP067453.1 See Comparison
NZ_CP084989.1 See Comparison
NZ_CP073629.1 See Comparison
NZ_CP075289.1 See Comparison
NZ_CP067258.1 See Comparison
NZ_CP079689.1 See Comparison
NZ_CP079614.1 See Comparison
NZ_CP095564.1 See Comparison
NZ_CP109610.1 See Comparison
CP052149.1 See Comparison
CP052508.1 See Comparison
CP052501.1 See Comparison
NZ_CP063746.1 See Comparison
NZ_CP063146.1 See Comparison
NZ_CP097195.1 See Comparison
CP052442.1 See Comparison
NZ_CP068141.1 See Comparison
NZ_AP023458.1 See Comparison
NZ_CP047706.1 See Comparison
OX030753.1 See Comparison
NZ_CP104201.1 See Comparison
NZ_CP103678.1 See Comparison
NZ_CP103588.1 See Comparison
OX030722.1 See Comparison
OX030712.1 See Comparison
OW968377.1 See Comparison
NZ_CP097414.1 See Comparison
NZ_CP097418.1 See Comparison
OW969771.1 See Comparison
OW969685.1 See Comparison
OW969921.1 See Comparison
OW969843.1 See Comparison
OW969652.1 See Comparison
OW968462.1 See Comparison
OW968368.1 See Comparison
OW968438.1 See Comparison
OW968263.1 See Comparison
OW968270.1 See Comparison
OW968219.1 See Comparison
OW968037.1 See Comparison
OW967871.1 See Comparison
OW968123.1 See Comparison
OW849398.1 See Comparison
OW967372.1 See Comparison
OW849424.1 See Comparison
OW967773.1 See Comparison
NZ_CP086457.1 See Comparison
OW849339.1 See Comparison
OW849187.1 See Comparison
OW849224.1 See Comparison
NZ_CP086460.1 See Comparison
NZ_CP086463.1 See Comparison
NZ_CP086466.1 See Comparison
NZ_CP043593.1 See Comparison
NZ_CP086469.1 See Comparison
CP067708.1 See Comparison
CP067965.1 See Comparison
CP067955.1 See Comparison
CP067677.1 See Comparison
CP067670.1 See Comparison
CP067662.1 See Comparison
CP067478.1 See Comparison
NZ_CP068141.1 See Comparison
CP067453.1 See Comparison
NZ_CP073629.1 See Comparison
NZ_CP075289.1 See Comparison
NZ_CP095564.1 See Comparison
CP052149.1 See Comparison
CP052508.1 See Comparison
CP052501.1 See Comparison
NZ_CP084989.1 See Comparison
NZ_CP079689.1 See Comparison
NZ_CP079614.1 See Comparison
NZ_CP067258.1 See Comparison
NZ_CP036325.1 See Comparison
CP052442.1 See Comparison
NZ_AP023458.1 See Comparison
NZ_CP047706.1 See Comparison
NZ_CP063746.1 See Comparison
NZ_CP063146.1 See Comparison
NZ_CP097195.1 See Comparison
NZ_CP109610.1 See Comparison
NZ_CP043593.1 See Comparison
NZ_CP103678.1 See Comparison
NZ_CP103588.1 See Comparison
OX030753.1 See Comparison
OX030722.1 See Comparison
OX030712.1 See Comparison
OW969921.1 See Comparison
OW969843.1 See Comparison
OW969652.1 See Comparison
OW968462.1 See Comparison
OW968438.1 See Comparison
OW968219.1 See Comparison
OW968123.1 See Comparison
OW967871.1 See Comparison
OW967372.1 See Comparison
OW849398.1 See Comparison
OW849224.1 See Comparison
NZ_CP104201.1 See Comparison
NZ_CP097414.1 See Comparison
NZ_CP097418.1 See Comparison
OW969771.1 See Comparison
OW969685.1 See Comparison
OW968377.1 See Comparison
OW968368.1 See Comparison
OW968270.1 See Comparison
OW968263.1 See Comparison
OW968037.1 See Comparison
OW967773.1 See Comparison
OW849424.1 See Comparison
OW849339.1 See Comparison
OW849187.1 See Comparison
NZ_CP086457.1 See Comparison
NZ_CP086460.1 See Comparison
NZ_CP079689.1 See Comparison
NZ_CP086463.1 See Comparison
NZ_CP086466.1 See Comparison
NZ_CP086469.1 See Comparison
CP067965.1 See Comparison
CP067955.1 See Comparison
CP067478.1 See Comparison
CP067453.1 See Comparison
NZ_CP084989.1 See Comparison
CP067708.1 See Comparison
CP067677.1 See Comparison
CP067670.1 See Comparison
CP067662.1 See Comparison
NZ_CP073629.1 See Comparison
NZ_CP075289.1 See Comparison
NZ_CP079614.1 See Comparison
NZ_CP067258.1 See Comparison
CP052149.1 See Comparison
NZ_CP036325.1 See Comparison
NZ_CP095564.1 See Comparison
CP052442.1 See Comparison
CP052508.1 See Comparison
CP052501.1 See Comparison
NZ_CP097418.1 See Comparison
NZ_AP023458.1 See Comparison
NZ_CP063746.1 See Comparison
NZ_CP063146.1 See Comparison
NZ_CP068141.1 See Comparison
NZ_CP047706.1 See Comparison
NZ_CP097195.1 See Comparison
NZ_CP109610.1 See Comparison
NZ_CP104201.1 See Comparison
NZ_CP103678.1 See Comparison
NZ_CP103588.1 See Comparison
OX030753.1 See Comparison
OX030722.1 See Comparison
OX030712.1 See Comparison
OW969771.1 See Comparison
NZ_CP097414.1 See Comparison
OW969921.1 See Comparison
OW969843.1 See Comparison
OW969685.1 See Comparison
OW969652.1 See Comparison
OW968462.1 See Comparison
OW968377.1 See Comparison
OW968438.1 See Comparison
OW968368.1 See Comparison
OW968270.1 See Comparison
OW968219.1 See Comparison
OW968263.1 See Comparison
OW968123.1 See Comparison
OW968037.1 See Comparison
OW967871.1 See Comparison
OW967773.1 See Comparison
NZ_CP043593.1 See Comparison
OW967372.1 See Comparison
NZ_CP086457.1 See Comparison
NZ_CP086460.1 See Comparison
OW849424.1 See Comparison
OW849398.1 See Comparison
OW849339.1 See Comparison
OW849224.1 See Comparison
OW849187.1 See Comparison
CP067965.1 See Comparison
CP067708.1 See Comparison
NZ_CP086463.1 See Comparison
NZ_CP086466.1 See Comparison
NZ_CP086469.1 See Comparison
CP067955.1 See Comparison
CP067478.1 See Comparison
CP067677.1 See Comparison
CP067670.1 See Comparison
CP067662.1 See Comparison
CP067453.1 See Comparison
NZ_CP073629.1 See Comparison
NZ_CP084989.1 See Comparison
NZ_CP036325.1 See Comparison
NZ_CP079689.1 See Comparison
NZ_CP079614.1 See Comparison
NZ_CP075289.1 See Comparison
NZ_CP067258.1 See Comparison
CP052442.1 See Comparison
NZ_CP095564.1 See Comparison
NZ_CP063746.1 See Comparison
CP052149.1 See Comparison
CP052588.1 See Comparison
CP052508.1 See Comparison
CP052501.1 See Comparison
NZ_CP068141.1 See Comparison
NZ_AP023458.1 See Comparison
NZ_CP047706.1 See Comparison
NZ_CP063146.1 See Comparison
NZ_CP097195.1 See Comparison
NZ_CP079689.1 See Comparison
NZ_CP109610.1 See Comparison
NZ_CP104201.1 See Comparison
NZ_CP103588.1 See Comparison
NZ_CP097414.1 See Comparison
NZ_CP097418.1 See Comparison
OW969921.1 See Comparison
OW969843.1 See Comparison
OW969771.1 See Comparison
OW968462.1 See Comparison
OW968438.1 See Comparison
OW968377.1 See Comparison
OW968219.1 See Comparison
OW968123.1 See Comparison
OW968037.1 See Comparison
OW967372.1 See Comparison
OW849398.1 See Comparison
OW849224.1 See Comparison
OW849187.1 See Comparison
NZ_CP043593.1 See Comparison
NZ_CP086460.1 See Comparison
NZ_CP086463.1 See Comparison
CP067955.1 See Comparison
CP067708.1 See Comparison
CP067677.1 See Comparison
CP067670.1 See Comparison
CP067662.1 See Comparison
NZ_CP084989.1 See Comparison
NZ_CP073629.1 See Comparison
NZ_CP103678.1 See Comparison
OX030753.1 See Comparison
OX030722.1 See Comparison
OX030712.1 See Comparison
OW969685.1 See Comparison
OW969652.1 See Comparison
OW968368.1 See Comparison
OW968270.1 See Comparison
OW968263.1 See Comparison
OW967871.1 See Comparison
OW967773.1 See Comparison
OW849424.1 See Comparison
OW849339.1 See Comparison
NZ_CP086457.1 See Comparison
NZ_CP086466.1 See Comparison
NZ_CP086469.1 See Comparison
CP067965.1 See Comparison
CP067478.1 See Comparison
CP067453.1 See Comparison
NZ_CP079614.1 See Comparison
NZ_CP075289.1 See Comparison
NZ_CP067258.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore