Plasmid CP050281.1

Sequence

Nucleotide Information

Accession CP050281.1
Description Klebsiella pneumoniae strain 9949 plasmid unnamed1, complete sequence
Source insd
Topology circular
Length 237416 bp
GC Content 0.50 %
Created at NCBI March 29, 2020



Assembly

Genome Data Information

Accession GCA_011765405.1
Assembly Coverage 150


Biosample

Curated Collection Information
Accession 13702289

PLASMID INFORMATION

GEOGRAPHICAL INFORMATION
Original Query 28.41N;115.54E
Original Query Type coordinates
Coordinates (Lat/Lon) 28.41/115.54
Address 东头岗, Lanfang, Gao'an, Yichun, Jiangxi, China

ECOSYSTEM
Original Query Homo sapiens,blood
Classification blood,circulatory_system,host_associated
Host-associated Taxon
  • Homo sapiens (9606)

DISEASE
Original Query Sepsis
DOID/SYMP
  • Disease infectious agent (DOID:0050117 )
    • A disease that is the consequence of the presence of pathogenic microbial agents, including pathogenic viruses, pathogenic bacteria, fungi, protozoa, multicellular parasites, and aberrant proteins known as prions.

Visualization

PNG JSON

Plasmids from same Biosample



Similar Plasmids

based on Mash distance

NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP088996.1 See Comparison
NZ_CP077778.1 See Comparison
NZ_MT269847.1 See Comparison
NZ_CP152440.1 See Comparison
CP139238.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP125350.1 See Comparison
NZ_CP154274.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP154419.1 See Comparison
NZ_CP152449.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_MH643786.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP066255.1 See Comparison
NZ_CP064218.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP063834.1 See Comparison
NZ_CP034416.1 See Comparison
NZ_CP064236.1 See Comparison
NZ_CP064242.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP099414.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP106913.1 See Comparison
NZ_CP106908.1 See Comparison
NZ_CP102193.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_CP066905.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP088996.1 See Comparison
NZ_CP077778.1 See Comparison
NZ_MT269847.1 See Comparison
NZ_CP152440.1 See Comparison
CP139238.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP125350.1 See Comparison
NZ_CP152449.1 See Comparison
NZ_CP154274.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP064236.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP154419.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP034416.1 See Comparison
NZ_CP066255.1 See Comparison
NZ_CP064218.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP064242.1 See Comparison
NZ_CP063834.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_MH643786.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP106913.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP106908.1 See Comparison
NZ_CP102193.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_CP066905.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP077778.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP099414.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP088996.1 See Comparison
NZ_CP034416.1 See Comparison
NZ_MT269847.1 See Comparison
CP139238.1 See Comparison
NZ_CP152440.1 See Comparison
NZ_CP152449.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP125350.1 See Comparison
NZ_CP154274.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP154419.1 See Comparison
NZ_CP064236.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP066255.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP063834.1 See Comparison
NZ_CP064242.1 See Comparison
NZ_CP064218.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_MH643786.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP106913.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP106908.1 See Comparison
NZ_CP102193.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_CP066905.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP099414.1 See Comparison
NZ_CP077778.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP088996.1 See Comparison
CP139238.1 See Comparison
NZ_MT269847.1 See Comparison
NZ_CP034416.1 See Comparison
NZ_CP152440.1 See Comparison
NZ_CP152449.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP125350.1 See Comparison
NZ_CP154274.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP154419.1 See Comparison
NZ_CP066255.1 See Comparison
NZ_CP064236.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP063834.1 See Comparison
NZ_CP064242.1 See Comparison
NZ_CP064218.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_MH643786.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP106913.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP106908.1 See Comparison
NZ_CP102193.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_CP066905.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP099414.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
CP139238.1 See Comparison
NZ_CP077778.1 See Comparison
NZ_CP088996.1 See Comparison
NZ_MT269847.1 See Comparison
NZ_CP154274.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP125350.1 See Comparison
NZ_CP152440.1 See Comparison
NZ_CP152449.1 See Comparison
NZ_CP154394.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP154419.1 See Comparison
CP050281.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP066255.1 See Comparison
NZ_CP034416.1 See Comparison
NZ_CP064236.1 See Comparison
NZ_CP064242.1 See Comparison
NZ_CP064218.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_MH643786.1 See Comparison
NZ_CP063834.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP106913.1 See Comparison
NZ_CP106908.1 See Comparison
NZ_CP102193.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_MZ546617.1 See Comparison
NZ_CP066905.1 See Comparison
NZ_MT269847.1 See Comparison
NZ_CP099414.1 See Comparison
NZ_CP087652.1 See Comparison
NZ_CP077778.1 See Comparison
NZ_CP087664.1 See Comparison
NZ_CP087658.1 See Comparison
NZ_CP090206.1 See Comparison
NZ_CP088996.1 See Comparison
NZ_CP154394.1 See Comparison
CP139238.1 See Comparison
NZ_CP125344.1 See Comparison
NZ_CP125350.1 See Comparison
NZ_CP154419.1 See Comparison
NZ_CP152440.1 See Comparison
NZ_CP154274.1 See Comparison
NZ_CP152449.1 See Comparison
NZ_CP152444.1 See Comparison
NZ_CP064236.1 See Comparison
NZ_CP047193.1 See Comparison
NZ_CP032241.1 See Comparison
NZ_CP066255.1 See Comparison
NZ_CP064224.1 See Comparison
NZ_CP034416.1 See Comparison
NZ_CP064242.1 See Comparison
NZ_CP064218.1 See Comparison
NZ_CP107292.1 See Comparison
NZ_CP063834.1 See Comparison
NZ_MH643786.1 See Comparison
NZ_CP116492.1 See Comparison
NZ_CP107298.1 See Comparison
NZ_CP102193.1 See Comparison
NZ_CP106913.1 See Comparison
NZ_CP106908.1 See Comparison
NZ_CP102187.1 See Comparison
NZ_CP066905.1 See Comparison
NZ_CP099414.1 See Comparison
NZ_MZ546617.1 See Comparison


Plasmid Visualization

JSON GENBANK

NUCCORE ACC Source Element Name Display Sequence Favorite
NUCCORE ACC Source Element Name Display Sequence Favorite



Annotations

based on the NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process
NUCCORE ACC Gene Locus Tag Product Protein id Codon Start Translation Table GO process



Antimicrobial Resistance

based on NCBIAMRFinder and CARD
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)
NUCCORE ACC Analysis Software Name Reference Database Version Gene Symbol Gene Name Drug Class Antimicrobial Agent Gene Start Gene Stop Gene Length Strand Orientation Sequence Identity (%) Coverage (%)



Biosynthetic Gene Clusters

based on ANTISMASH

Typing

based on MOB-Typer and Plasmid Multilocus Sequencing Typing (PMLST)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)
NUCCORE ACC Contigs md5 hash Replicon Type Relaxase Type MPF Type OriT Type Predicted Mobility Primary Cluster ID Secondary Cluster ID Observed Host Range Ncbi Rank Observed Host Range Ncbi Name Mash Nearest Neighbor Mash Neighbor Distance Mash Neighbor Identification Reported Host Range Lit Rank Reported Host Range Lit Name Replicon Type Accession Relaxase Type Accession MPF Type Accession OriT Type Accession Associated PMID(s)




BLAST results of detected typing markers by MOB-type
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore
NUCCORE ACC biomarker MOB-suite ID Element Start End Strand Identity Coverage Evalue Bitscore