LOCUS       OY754449                5631 bp    DNA     circular BCT 28-OCT-2023
DEFINITION  Escherichia coli isolate S138 genome assembly, plasmid: pS138-2.
ACCESSION   OY754449
VERSION     OY754449.1
DBLINK      BioProject: PRJEB62104
            BioSample: SAMEA113542891
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Leclercq,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2023) INRAE, ISP, Centre INRAE Val de Loire, Site
            de Tours, Bat 213, 37380 Nouzilly, France
COMMENT     Complete genomic sequence of E. coli strain S138.
FEATURES             Location/Qualifiers
     source          1..5631
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="S138"
                     /db_xref="taxon:562"
                     /plasmid="pS138-2"
     gene            complement(<1..638)
                     /locus_tag="FGAS138_48430"
     CDS             complement(<1..638)
                     /locus_tag="FGAS138_48430"
                     /note="*inference: COORDINATES:ab initio
                     prediction:Prodigal:2.6.3; Prodigal_4846"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="CAK0731313.1"
                     /translation="MNLQQRINKLPQLSSSFSFGKDIDNIHSFIFNETSKDKIEDLLRK
                     WVSGNQPCVFGKLASKKIKGLDFHLSIVNSPQLYNDDGHLFDFLRNERVRFKERARRGE
                     VSAHLIYFIHPQLAFARPSEELVDIQKYICSLHMPECYPIKEDVIYTESVPFQDKDGLK
                     IYKAGVNVFYSSAHRTRNHDRRIPGGILISVNAPGHFMRLAIEKGFYKD"
                     /name="hypothetical protein"
     gene            complement(1119..1352)
                     /locus_tag="FGAS138_48440"
     CDS             complement(1119..1352)
                     /locus_tag="FGAS138_48440"
                     /note="*inference: COORDINATES:ab initio
                     prediction:Prodigal:2.6.3; Prodigal_4847"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="CAK0731319.1"
                     /translation="MTELERHLLNALEQLQQDYMQRLNEWENAFVELQKMFSLTQRDNA
                     MLNGRVMQLSQQVQHLSERTERLSQLYSENRR"
                     /name="hypothetical protein"
     gene            complement(1359..1889)
                     /locus_tag="FGAS138_48450"
     CDS             complement(1359..1889)
                     /locus_tag="FGAS138_48450"
                     /note="*inference: COORDINATES:ab initio
                     prediction:Prodigal:2.6.3; Prodigal_4848"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="CAK0731325.1"
                     /translation="MSNLLQTGAEFEKKLKERAESTEKMLNDEFRKLEESVNRELTSNE
                     SLIRNAINDHTTALKELLERYQKTTVDTMDAHWKTVLKMSVKRWLWLIIVSVLMFATTG
                     SLLWYQGMKINANMNILREQKESLEKLNAKTWGVRYHEDSNGRFLVLPKGMKAETNWTK
                     DNGKLNAVRLVQE"
                     /name="hypothetical protein"
     gene            complement(2567..2923)
                     /locus_tag="FGAS138_48460"
     CDS             complement(2567..2923)
                     /locus_tag="FGAS138_48460"
                     /note="*inference: COORDINATES:ab initio
                     prediction:Prodigal:2.6.3; Prodigal_4849"
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="CAK0731331.1"
                     /translation="MGVMIPMKRERMLTIRVTDDEHARLLERCEGKQLAVWMRRVCLGE
                     PVARSGKLPTLAPPLLRQLAAIGNNLNQTARKVNSGQWSSGDRVQVVAALMAIGDELRR
                     LRLAVREQGARDDS"
                     /name="hypothetical protein"
     gene            2955..3146
                     /locus_tag="FGAS138_48470"
     CDS             2955..3146
                     /locus_tag="FGAS138_48470"
                     /inference="similar to AA sequence:RefSeq:WP_002213433.1"
                     /note="*inference: COORDINATES:ab initio
                     prediction:Prodigal:2.6.3; WP_002213433.1 Rop family
                     plasmid primer RNA-binding protein (Bacteria) [pid:63.9%,
                     q_cov:96.8%, s_cov:95.3%, Eval:3.5e-20]; Prodigal_4850"
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="CAK0731337.1"
                     /translation="MTKQEKTALNMARFIRGQTLTLLEKLNELDADEQADICESLHDHA
                     DELYRSCLARFGDDGENR"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            complement(4349..5215)
                     /locus_tag="FGAS138_48480"
     CDS             complement(4349..5215)
                     /locus_tag="FGAS138_48480"
                     /inference="similar to AA sequence:RefSeq:WP_003021093.1"
                     /note="*inference: COORDINATES:ab initio
                     prediction:Prodigal:2.6.3; WP_003021093.1 DMT family
                     transporter (Francisella tularensis) [pid:30.6%,
                     q_cov:86.1%, s_cov:84.2%, Eval:9.6e-16]; TIGR:TIGR00950;
                     2A78: carboxylate/amino acid/amine transporter
                     [Name:TIGR00950, Eval:2.8e-16, score:57.7, bias:31.2];
                     COG:COG0697:RhaT Permease of the drug/metabolite
                     transporter (DMT) superfamily [Category:GER, Aligned:1-284,
                     Eval:1.3e-17, score:78.0]; Prodigal_4851"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="CAK0731343.1"
                     /translation="MIKGMLFAFLAAFSWGAAIVMSKKGVEELDAGGVFFWQICSAVIL
                     SWIVLFIKRKKLPLNSKAILAYATGVFEPFLAYTFTLYGLYFISAGSASIIFSLESVFI
                     LVLSVLICSVKINSPQYFILFLIGAIVGSILVALPDISNGSNNIVGYCLVVAGVLSAAF
                     YVVISSRLIKSFEPITLLSGQLTFSLILSSLFIFISKSSIYLPLESVIIVFSSGILQYF
                     LAFCFYLNSLRWLPVHLAGIMLYFIPLVALFLSWLFLDEQFTFLQGVGFIVTVLSVYFL
                     NRKYSEE"
                     /name="DMT family transporter"
     gene            complement(5217..>5631)
                     /locus_tag="FGAS138_48490"
     CDS             complement(5217..>5631)
                     /locus_tag="FGAS138_48490"
                     /note="*inference: COORDINATES:ab initio
                     prediction:Prodigal:2.6.3; Prodigal_4852"
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="CAK0731349.1"
                     /translation="EQALADIRNMTIQSVGKGGYSHPEGISTTWHSESNLDRFGCPVHT
                     GNSSYYSGFYHTDVLIPGELTKDERLLHEIENSDPMIFNWNVLFYVSLEEFPIDDPYYG
                     EFIGIPVDDASMFFNSFQPRKFENKPLYEKEDD"
                     /name="hypothetical protein"
     Typing          complement(3241..3322)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="1.3400000000000002e-35"
     Typing          complement(3779..3966)
                     /name="rep_cluster_2401"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="4.63e-94"
     Typing          complement(1016..2577)
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 tgatctttat agaaaccttt ttctatcgcc agcctcataa aatgccccgg ggcatttaca
       61 gaaataagta ttccccctgg tattcttcta tcatgatttc ttgttctatg agcagaagag
      121 taaaaaacat taacaccagc cttatatatt tttagcccat ctttatcctg aaatggtacg
      181 ctttcagtat aaataacatc ctcttttatt ggatagcact ctggcatatg cagcgaacaa
      241 atatattttt gtatgtccac taactcttct gatggacgag caaaggcaag ttgtggatga
      301 ataaaataaa tgagatgcgc actgacctct cctcttcttg cgcgttcttt aaaacgaact
      361 ctttcattac gcaaaaaatc aaacaaatga ccatcatcat tatatagttg ggggctattt
      421 acaatagata aatggaaatc aagcccttta attttcttgc ttgccaattt accaaataca
      481 cagggctgat tgcctgacac ccattttctt agtaaatctt caattttatc tttagaagtt
      541 tcgttaaaga taaatgaatg aatattatca atatcttttc caaatgaaaa actggatgat
      601 aattgtggta gtttatttat acgttgttga agattcatga aagctcccac aagacacctc
      661 atatattttt ttatatactg aaactacatt atatttatta ccggcgtaaa acgaaataat
      721 ttattatcgt taccgatatt ttaaaaaaat cattatttgc acagtgttcg agttgttagt
      781 atcactcctt cctgaaaatc cgctccattt accataacgt cgcattgtac gcaccgccaa
      841 aacgcgttcg gtgcgatcac ggcagcagac aggtaaaaat ggcaacaaac cacccgaaaa
      901 actgccgcga tcgcacctga taaattttaa ccgcatgaat acctatgcaa ccagatgcta
      961 caggccacat tagcccgcct taatccactg aacacgtcat ttttcatggt ttcaccatcc
     1021 cagcgaaggg ccatccagtg tccgctcctg gatttccggc tgacgctccc gctccagaga
     1081 taactcatgt tcgcgttcct gcatcagccg ttcatccctt atctcctgtt ctcgctgtat
     1141 aactggctca agcgttctgt ccgctcgctc aagtgctgca cctgctgact caactgcatg
     1201 actcgcccgt tcagcatcgc gttgtcccgt tgcgtaagcg aaaacatttt ctgcaattcc
     1261 acgaaggcgt tctcccattc gttcagccgc tgcatatagt cctgttgcag ttgctctaat
     1321 gcgttcagca aatgtctttc cagctccgtc atgctctgtc actcctgcac cagtctcact
     1381 gcgttcagtt tgccgttgtc cttcgtccag ttcgtttcgg ctttcatccc cttcggcaac
     1441 accagaaaac gtccgttgct gtcctcgtga taacgcacgc cccatgtctt cgcgttcagc
     1501 ttctccagac tctctttctg ctcgcggaga atattcatat tcgcgtttat cttcatgccc
     1561 tggtaccaca gcagactccc ggtcgtggca aacatcagta ctgagacgat aatcagccac
     1621 agccagcgtt tcacgctcat tttcagtacg gttttccagt gcgcgtccat cgtatcgacg
     1681 gtcgttttct gatacctctc cagcagttct ttcagggctg ttgtatggtc gttgatagcg
     1741 ttcctgatta aagattcgtt tgaggtcagt tccctgttta cagattcttc gagcttcctg
     1801 aactcgtcgt tcagcatttt ctctgtagat tcggctctct ctttcagctt tttctcgaac
     1861 tccgcgcccg tctgtaaaag attgctcata aaacgctcct ttcagtctga tattcctccc
     1921 gccgttcggg tctgcaatgc tgatactgct tcgcgtcacc ctgaccactt caagccccgc
     1981 ctctgtgagc gcctgaatca catcctgacg gccttttatc tctccggcat ggtaaagcgc
     2041 gtctatcccg cgtgtgacgc cctcagcaag cgcctgtttc gtttccggca ggttatcagg
     2101 aagggtcagc gtccggcggt tctccggggc gttggggtca tgcagaccgt aatggtgatt
     2161 caccagcgtc tgccaggcat caattctcgg cctgtctgcc cggtcgtagt acggctggag
     2221 gcgttttccg gtctgtagct ccatgttcgg aatgacaaaa ttcagctcaa gccgtccctt
     2281 gtcctggtgc tccacccaca ggatgctgta ctgatttttc tcgagaccgg gcatcagtac
     2341 acgctcaaag ctcgccatca ctttttcacg ccctccaggc ggcagctcct tctccgcgaa
     2401 cgacagaaca cctgacgtgt atttcttcgc aaatggcgtg gcatcgatga gttcccggac
     2461 ctcttccgga ttcccctgaa gcaccgttgc cccttcccgg ttacgctccc ttcccagcag
     2521 gtaatcaacc ggaccactgc caccaccttt tcccctggca tgaaacttaa ctatcatccc
     2581 gcgccccctg ttccctgacc gccagacgca gccggcgcag ctcatccccg atggccatca
     2641 gtgcggccac cacctgaacc cggtcaccgg aagaccactg cccgctgttc accttcctcg
     2701 ctgtctggtt aaggttattc ccgatggcgg ccagctgacg cagtaacggc ggtgccagtg
     2761 tcggcagctt cccggaacgg gcaaccggct cacccaggca gacccgccgc atccataccg
     2821 ccagttgttt accctcacag cgttccagta accgggcatg ttcatcatca gtaacccgta
     2881 tcgtgagcat cctctcgcgt ttcatcggta tcattacccc catgaacaga accccccctt
     2941 acacggaggc atcagtgacc aaacaggaaa aaaccgccct taacatggcc cgcttcatca
     3001 gaggccagac attaacgctg ctggagaagc tcaacgaact ggacgcggat gaacaggcag
     3061 acatctgtga atcgcttcac gaccacgccg atgagcttta ccgcagttgc ctcgcacgct
     3121 tcggggatga cggtgaaaac cgctgacaca tgcagctccc ggagacggtc acagcttgtc
     3181 tgtgagcgga tgccgggagc agacaagccc gccagggcgc gtcaggccgt tgacctttgg
     3241 ggtgtcgggg cgaagccctg acccagtcac gtagcgatag cggagtgtat actggcttaa
     3301 ccattcggca tcagtgcgga ttgtatgaaa agtgcgccat gtccggtgtg aaatgccgca
     3361 cagatgcgta aggagaaaat gccagttcag gcgctcttcc gcttcctcgc tcactgactc
     3421 gctacgctcg gtcgttcggc tgcggcgagc ggactctcct ttctcaaaaa cgctaaccct
     3481 gttatccaca gaacccgggg ataaaccagg aaagaacatg tgcgcaaaaa acgaaacccc
     3541 gggaaaggcc gcgccggagg cgctttttcc ataggctccg cccccctgac ggacttcaca
     3601 aaacagacac tttttcggtg catctgtggg agccttgcgg ctcaaccatg aaatccgcca
     3661 gcggtggcga aacccgacgt ggcttaaaga tcatcaccgt ttccggtgaa tcgctccctc
     3721 ctgcgccccc acgttcccgc catatcgatt accggatacc ttttccgcct ttctccctta
     3781 cgggacacgt ggcgctttct catagctcac gtcttctggt atctcggggc gacttaggca
     3841 gttcgctccg ggctgggctg tatgcaggaa ccccccgttc agcccgactg ctgcgccttc
     3901 tccggtaact gttctcttgg gtccaacccg gaaaagacac cacaaagcgc cactggcagc
     3961 agccattggt aaaagtcatg tgcgagatat ttagagagta cttgaagtgg ctgccggagt
     4021 gcggctacac tagaagaaca attttggtga ctcgtctcgc ataagacagt tacctggtta
     4081 agcagtctgc aagctgactt aaccttcgat caaaccgccc tgcaaggcgg ttttttcgtt
     4141 tacaggcagc agattacgcg cagaaaaaaa ggatctcaag aggatccttt gatctttttg
     4201 ttacaaacgt ctctatttga ctcccctgag agcgttttag cgcgcctctg acccccttgg
     4261 ttacattccg acaccagaaa cgctcccgtt ttttacgtgc atttggcacg gtatcgatgg
     4321 aggccggggg gcaatcctga acagaatgtt actcctctga gtattttctg ttaagaaaat
     4381 atacacttag cacagttaca ataaatccta ccccctgtaa gaatgtgaat tgttcatcca
     4441 aaaacaacca tgacaaaaat aatgcaacta gcggaataaa gtacaacatt atccctgcca
     4501 aatgaactgg gagccaacgc aaggagttca agtaaaaaca aaaagctaaa aaatattgta
     4561 atattccaga tgaaaaaaca ataatcacgg attccaacgg aagataaatt gatgatttag
     4621 atataaaaat aaagagcgat gacagtataa gggagaatgt caactgtccg ctcaataatg
     4681 tgataggctc aaacgattta ataaggcgag acgatataac aacataaaat gctgccgata
     4741 acacaccggc aacaacaaga caatatccaa caatattatt cgatccatta ctgatgtctg
     4801 gcaaggctac caaaatactg ccaacaattg cacctataag gaacaatata aaatattgcg
     4861 gggaattaat tttaactgag caaataagaa cagacaacac caatataaac actgattcaa
     4921 gtgaaaaaat aattgatgcg cttcctgctg aaataaaata aagtccgtag agtgtaaaag
     4981 tatacgctaa gaatggttca aaaacgcctg tcgcataagc aagtatcgct tttgagttta
     5041 atgggagttt ttttcttttt ataaaaagaa ctatccaaga tagtattact gcactacaaa
     5101 tctgccagaa aaacacccct ccggcatcta gttcttcaac tccttttttg ctcattacga
     5161 tagctgcccc ccatgagaac gctgctaaaa aagcaaaaag cattccttta atcatattaa
     5221 tcatcctctt tctcataaag gggtttgttt tcaaatttcc ttggttgaaa ggagttaaaa
     5281 aacatagatg catcatctac aggaatacca ataaactctc cataataagg atcatctata
     5341 ggaaactctt ctaatgaaac ataaaacaat acattccagt tgaagatcat tggatcacta
     5401 ttttctattt catggagcaa tctttcatcc ttagttaatt ctcctggaat taatacatca
     5461 gtatgataaa aaccgctgta ataagaacta ttaccggtgt gcactgggca tccaaaacga
     5521 tccaaattag attctgaatg ccatgttgta gaaatccctt ccggatgtga atacccaccc
     5581 ttaccaacag actgaatagt catgttacga atatccgcta acgcttgttc t
//
