LOCUS       NZ_OZ039052             1718 bp    DNA     circular CON 20-MAY-2024
DEFINITION  Escherichia coli isolate 30224_1#201 plasmid 8, complete sequence.
ACCESSION   NZ_OZ039052
VERSION     NZ_OZ039052.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA9068025
            Assembly: GCF_964040665.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Arredondo Alonso,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2024) UNIVERSITY OF OSLO, Postboks 1122 Blindern,
            0317 Oslo, Norway
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964040665.1-RS_2024_05_20
            Annotation Date                   :: 05/20/2024 11:48:13
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,099
            CDSs (total)                      :: 4,986
            Genes (coding)                    :: 4,792
            CDSs (with protein)               :: 4,792
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 194
            CDSs (without protein)            :: 194
            Pseudo Genes (ambiguous residues) :: 0 of 194
            Pseudo Genes (frameshifted)       :: 68 of 194
            Pseudo Genes (incomplete)         :: 143 of 194
            Pseudo Genes (internal stop)      :: 35 of 194
            Pseudo Genes (multiple problems)  :: 44 of 194
            Pseudo Genes (short protein)      :: 1 of 194
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OZ039052.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="30224_1#201"
                     /db_xref="taxon:562"
                     /plasmid="8"
     gene            1..405
                     /locus_tag="ABGU55_RS25490"
     CDS             1..405
                     /locus_tag="ABGU55_RS25490"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_061604172.1"
                     /translation="MKILAAMEIADCDFEHMDMDVLVGALLKLKLWDSHHHNLNMQGKR
                     SFLDDLRADGIEAIKKYEAEIESENESFAEERLILRIYQNELGLWLGRLFCGEAEIGQC
                     GVYGSADEVRTAARQSGILCDSIEIFQKDA"
                     /name="hypothetical protein"
     gene            1269..1505
                     /locus_tag="ABGU55_RS25495"
     CDS             1269..1505
                     /locus_tag="ABGU55_RS25495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_016230891.1"
                     /translation="MTRLTNLTPAEKKFIDDAIAAAERAAGKKLNQPNRHIVLNRARAQ
                     IESQRYADRQRALREDERQQSDFAWSRPRAPRR"
                     /name="hypothetical protein"
     Typing          1028..1112
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.512"
                     /coverage="100.0"
                     /evalue="3.06e-32"
ORIGIN
        1 atgaagattt tggctgcaat ggaaatagct gattgtgatt ttgaacatat ggatatggat
       61 gtcttagtag gggctttact gaaattaaaa ttgtgggata gccaccatca caacttgaac
      121 atgcaaggta agaggagctt tctcgatgat ttaagagcgg atggtattga ggctattaag
      181 aaatacgagg ctgaaattga atctgagaat gagtcctttg cggaggagcg attaatactg
      241 aggatctatc agaacgagct tggcttatgg ttagggaggc tcttttgtgg tgaggctgag
      301 atcggtcagt gtggtgttta tggatcggct gatgaggttc gaacagctgc gcgtcaaagc
      361 ggtattttgt gcgatagcat cgaaattttt caaaaggatg cctaatgccc ccgtggtggg
      421 tacaccagaa aacggggagc ggagcgacca gcgtcaggtc gttctatgtt gttctgattg
      481 tgtgggtgtt gtgccagact gggcaatcgc atttcaccgc aactcctgcc ttgaatctca
      541 ctttatcagg tgcctgttat cgtacagcga gacggggtag agcttaactc tttcgcggct
      601 aagttacgtt tccaccgttt gcctgtttat cctgccggag tccggggcgt agacctgagt
      661 ttcaagggtg cagatatgat tttaatgtcg ttgaatggta ttaagctggt agtgacaagg
      721 ctagccagcc ctgctaggat aggattgcta cgtctgatcc tggcaggtat ctgcgaagaa
      781 ttagagtacc gaagccctgt gattctgtca cggggctttt gtacatctgt agcctgattt
      841 ttcaacaaga tccccgtcac acctcacttc atgtatgtga aaaaagttgt agtgcccgcc
      901 gcagtctcac gtccggagcg tagcgaccga gtgagcgagg aggcatcatt tcactattcg
      961 ggcatggtat tgcggacgct tctgagccac atatcacacc tgccacatga cgcactttcc
     1021 tgataaccgc acctatgcca acatattaag ccagtataca ctccgctagc gctacgtgac
     1081 tggttcaggg ctgcgccccg aaacccgcta aatccactga cgcgcctgcg gcttgtccaa
     1141 cgcctcacgg caccggatta aaatccgctc ccgttcaccg tttctgactg cctttcaccg
     1201 tcgcttacgc ttcatcgttc ctactgtgtc tggcagactg caggggctat tctcatacgg
     1261 agataaacat gacgagactg acaaacctga cccccgctga gaaaaagttt atcgacgacg
     1321 ctatagccgc tgccgaacgt gcggccggga agaagctcaa tcagcctaac cggcacatcg
     1381 tcctgaacag agcgcgtgcg cagattgagt cgcagcgtta cgccgaccgc cagcgtgcat
     1441 tacgtgagga tgagcggcag cagtccgatt ttgcctggtc acgtccgcgc gcgccgcgcc
     1501 gctgattgcg gattttggcg gtttagtggt gctgatgctg cgaaatcacc tgcggttcac
     1561 ccgcgtgcat agctatgcag tcgcgcagaa atcatcaggg gcgtttttcc gggatgtggg
     1621 tgaggaaatg tgccggaaac ggctctgatg cgtcagaatt gcgctgaggg cctgtcaggg
     1681 ggtgctgata acggatgtta tggtaaatcg gagggtgt
//
