LOCUS       NZ_OZ038810             2101 bp    DNA     circular CON 20-MAY-2024
DEFINITION  Escherichia coli isolate 30345_1#335 plasmid 5, complete sequence.
ACCESSION   NZ_OZ038810
VERSION     NZ_OZ038810.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA9068055
            Assembly: GCF_964038895.1
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1
  AUTHORS   Arredondo Alonso,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-MAY-2024) UNIVERSITY OF OSLO, Postboks 1122 Blindern,
            0317 Oslo, Norway
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_964038895.1-RS_2024_05_20
            Annotation Date                   :: 05/20/2024 11:55:05
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,297
            CDSs (total)                      :: 5,184
            Genes (coding)                    :: 4,970
            CDSs (with protein)               :: 4,970
            Genes (RNA)                       :: 113
            rRNAs                             :: 8, 7, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 7, 7 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 5
            Pseudo Genes (total)              :: 214
            CDSs (without protein)            :: 214
            Pseudo Genes (ambiguous residues) :: 0 of 214
            Pseudo Genes (frameshifted)       :: 82 of 214
            Pseudo Genes (incomplete)         :: 154 of 214
            Pseudo Genes (internal stop)      :: 42 of 214
            Pseudo Genes (multiple problems)  :: 54 of 214
            Pseudo Genes (short protein)      :: 1 of 214
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OZ038810.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /isolate="30345_1#335"
                     /db_xref="taxon:562"
                     /plasmid="5"
     gene            1..267
                     /locus_tag="ABGU69_RS26475"
     CDS             1..267
                     /locus_tag="ABGU69_RS26475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001024536.1"
                     /translation="MNINIEYLNGNKTIGLFFLRSEAVIPDRFKNLILLIDGLSFGTFG
                     FHPHEGFEDELILYIQKTNERVKTLFVKIDLNGIKFGFLRTHS"
                     /name="hypothetical protein"
     gene            1133..2098
                     /locus_tag="ABGU69_RS26480"
     CDS             1133..2098
                     /locus_tag="ABGU69_RS26480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_001287824.1"
                     /translation="MSEDKFLSDYSPRDAVWDTQRTLTDSVGGIYQTAAEFERYALRMA
                     SCSGLLRFGWSTIMETGETRLRLRSAQFCRVRHCPVCQWRRTLMWQARFYQALPKIVVD
                     YPSSRWLFLTLTVRNCEIGELGTVLTAMNAAFKRMEKRKELSPVQGWIRATEVTRGKDG
                     SAHPHFHCLLMVQPSWFKGKNYVKHERWVELWRDCLRVNYEPNIDIRAVKTKTGEVVAN
                     VAEQLQSAVAETLKYSVKPEDMANDPEWFLELTRQLHKRRFISTGGALKNVLQLDRETN
                     EDLVIADDVGDGTDDGKRTAFVWDSGKRRYKRAPEKDKSD"
                     /name="protein rep"
     Typing          1527..1758
                     /name="Col(BS512)"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.05e-118"
ORIGIN
        1 atgaatatta atattgaata cctgaatgga aataagacta ttggtttatt ttttttaaga
       61 agtgaagcgg tgattcctga caggtttaaa aaccttattt tgcttattga tggattaagt
      121 tttggcacat ttggttttca tccgcacgaa ggttttgagg atgaattaat tttatatatt
      181 cagaaaacaa acgagagggt aaaaactctt tttgtgaaaa tagatttaaa cggtatcaag
      241 tttggatttt taagaacgca ttcttagttc tggaaaagag ccagcggcag gctgaggtga
      301 taggtacgag attgcatgca atctctagtg ctctgtctat cctgcattat cctcagcatt
      361 atcctcagca ttatcctcag ccttgccaac tcgacaccaa tgcaggatag acaatccgat
      421 gtcaaatgtt aacactctgc gagtggtaca ttttccccgg attatcgtcc tgagcctgcc
      481 gctggctctc tttctaccgc ctcgctttgc tcgttgctca acgcctcaca gacacggatt
      541 aaaatccgca tccgttcacc gttttttaaa gtccgttaaa agcatgatgc catctccgag
      601 agttaatctc gtcaaatgct aaatcgtggg ggtccccttt ggggttccga tttagtgatt
      661 gacgacacca ccgattaaaa aacttatgcg gggtggatgg tttcacgaag tgaggccatc
      721 cacctgtaag acagggtttt gtttttattc cctgttttgg tgatcgggtg tgtggaaaag
      781 gttggggtaa gccgttcggg ggtgcttgtt ttggggggtt aaaattgtgg ttattttttg
      841 cgcaattctc gcgcgtgatc cttgtattta tacttaaggg ataaatggcg gatatgaaat
      901 agtggtttag cccagtaatg acgaggcttt gagtgggttt tgacaggtca aagaaaatgg
      961 agcagaattg aggcgttttt aatcggcgtt ggggagtgcg tcaacactcc ccaacatttc
     1021 gaatgtgtca cctcagcggc aaactctggt gacatgtact ggctcgcaat gcacaggtac
     1081 gtgatgaata taccacatca aatcacagcc tgcccagatc ggagcaggct taatgtcaga
     1141 agataaattc ctttcggact acagcccccg tgatgcagtt tgggataccc agcgcacgct
     1201 taccgattct gtcgggggta tctaccagac tgctgctgaa ttcgagcgct atgcactccg
     1261 tatggcctcc tgtagcggtt tgttacgttt tggttggtct accatcatgg aaaccggaga
     1321 aacgcgccta cggcttcgta gtgcgcaatt ttgccgtgtc cgtcattgcc ctgtctgcca
     1381 gtggagaaga accctcatgt ggcaagcccg tttttatcag gctctaccga aaatcgttgt
     1441 ggattacccg tcttcccgat ggttgtttct gacgttaact gtcaggaact gcgagatagg
     1501 tgaacttgga acagtcctta cagcaatgaa tgcggcgttt aagcgaatgg aaaagcgaaa
     1561 ggagctatca cctgttcagg ggtggatcag ggctacggag gtgacgcgag gtaaggatgg
     1621 cagcgcacat ccgcattttc actgtctgct gatggtgcaa ccttcttggt ttaaagggaa
     1681 gaactacgtt aagcacgaac gttgggtaga actctggcgc gattgcttgc gggtgaacta
     1741 tgagccgaat atcgatattc gggcagtaaa aactaagaca ggtgaggttg tggccaacgt
     1801 tgccgagcaa ctgcaaagcg cggttgctga aacgctgaaa tactccgtta aaccggaaga
     1861 tatggcaaac gatcctgagt ggtttcttga gctgacgcgg cagcttcaca agcgccgttt
     1921 tatctcgacc ggtggggcgc taaaaaacgt cctccagttg gatcgagaaa ccaatgagga
     1981 tcttgtcatt gccgacgatg taggggatgg cactgatgac gggaagcgga cggcgtttgt
     2041 ctgggattca ggtaaacggc gttacaaacg cgcccctgag aaggataaat cggattaacg
     2101 t
//
