LOCUS       NZ_OY725901              583 bp    DNA     circular CON 06-DEC-2023
DEFINITION  Bacteroides finegoldii strain Bacteroides finegoldii TSDC17.2-1.1
            plasmid 91, complete sequence.
ACCESSION   NZ_OY725901
VERSION     NZ_OY725901.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA114266237
            Sequence Read Archive: ERR11835631, ERR11835633
            Assembly: GCF_963360665.1
KEYWORDS    RefSeq.
SOURCE      Bacteroides finegoldii
  ORGANISM  Bacteroides finegoldii
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
            Bacteroides.
REFERENCE   1
  AUTHORS   Beller W,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2023) WASHINGTON UNIVERSITY CENTER FOR GENOME
            SCIENCES, Jeffrey I Gordon Lab, 4523 Clayton Avenue, MSC
            8510-41-4209, St. Louis, MO 63110, USA
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/06/2023 03:29:57
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,702
            CDSs (total)                      :: 3,627
            Genes (coding)                    :: 3,479
            CDSs (with protein)               :: 3,479
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 40 of 148
            Pseudo Genes (incomplete)         :: 119 of 148
            Pseudo Genes (internal stop)      :: 22 of 148
            Pseudo Genes (multiple problems)  :: 28 of 148
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OY725901.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Bacteroides finegoldii"
                     /mol_type="genomic DNA"
                     /strain="Bacteroides finegoldii TSDC17.2-1.1"
                     /db_xref="taxon:338188"
                     /plasmid="91"
                     /geo_loc_name="USA"
                     /collection_date="2021-09"
     gene            complement(<2..205)
                     /locus_tag="UHF62_RS01125"
                     /pseudo=""
     CDS             complement(<2..205)
                     /locus_tag="UHF62_RS01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008668438.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /name="hypothetical protein"
ORIGIN
        1 gacgaatatt aaggaagacc ttcttgccac ggagaggaaa atcctgaaca ataacagggt
       61 cataaaagcc tttactctca gtatcctgat ctgtatactt ctcaggaacg atatttttct
      121 cctcaagata gaacacaact tcatttacac tttccttcac atcaacaaga tcaaagtagt
      181 ctaaatacaa tcgccaaaac aaaatgtgat aatgtaaaaa acgaaatgta ataactaaag
      241 ctatattaac acaaaacaaa atgtgatttt tactataaaa taatacgtta taaaatggca
      301 tttgaatacc tatataaaga gtatttaaat gccatcttac taagtactct cggaactaag
      361 tctattttgg tagaaagtca aagtttagga caaaacgggt atctgaaatg tagtaatgga
      421 ttgctaatcc aatggggaaa acattccggt tctactttgg aaaatataaa gtcacttgac
      481 ccactattat actcctgatt gacccatcaa aaaaatatga gatttaagta gagaaaaatg
      541 cattttaacc cggatcagtt tcagttataa ttctttatag cag
//
