LOCUS       NZ_OY725890             1317 bp    DNA     circular CON 06-DEC-2023
DEFINITION  Bacteroides finegoldii strain Bacteroides finegoldii TSDC17.2-1.1
            plasmid 80, complete sequence.
ACCESSION   NZ_OY725890
VERSION     NZ_OY725890.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA114266237
            Sequence Read Archive: ERR11835631, ERR11835633
            Assembly: GCF_963360665.1
KEYWORDS    RefSeq.
SOURCE      Bacteroides finegoldii
  ORGANISM  Bacteroides finegoldii
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
            Bacteroides.
REFERENCE   1
  AUTHORS   Beller W,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2023) WASHINGTON UNIVERSITY CENTER FOR GENOME
            SCIENCES, Jeffrey I Gordon Lab, 4523 Clayton Avenue, MSC
            8510-41-4209, St. Louis, MO 63110, USA
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/06/2023 03:29:57
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,702
            CDSs (total)                      :: 3,627
            Genes (coding)                    :: 3,479
            CDSs (with protein)               :: 3,479
            Genes (RNA)                       :: 75
            rRNAs                             :: 5, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 5, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 66
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 148
            CDSs (without protein)            :: 148
            Pseudo Genes (ambiguous residues) :: 0 of 148
            Pseudo Genes (frameshifted)       :: 40 of 148
            Pseudo Genes (incomplete)         :: 119 of 148
            Pseudo Genes (internal stop)      :: 22 of 148
            Pseudo Genes (multiple problems)  :: 28 of 148
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OY725890.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Bacteroides finegoldii"
                     /mol_type="genomic DNA"
                     /strain="Bacteroides finegoldii TSDC17.2-1.1"
                     /db_xref="taxon:338188"
                     /plasmid="80"
                     /geo_loc_name="USA"
                     /collection_date="2021-09"
     gene            complement(1..1262)
                     /locus_tag="UHF62_RS00640"
                     /old_locus_tag="BFTSDC17_03723"
     rRNA            complement(1..1262)
                     /locus_tag="UHF62_RS00640"
                     /old_locus_tag="BFTSDC17_03723"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
                     /name="16S ribosomal RNA"
ORIGIN
        1 ccaggtagct gccttctgta ccccccattg taacacgtgt gtagccccgg acgtaagggc
       61 cgtgctgatt tgacgtcatc cccaccttcc tcacatctta cgacggcagt ctctccagag
      121 tcctcagcat gacctgttag taactgaaga taagggttgc gctcgttatg gcacttaagc
      181 cgacacctca cggcacgagc tgacgacaac catgcagcac cttcacattt gccttacggc
      241 taaactgttt ccagattatt caaatgcaat ttaagcccgg gtaaggttcc tcgcgtatca
      301 tcgaattaaa ccacatgttc ctccgcttgt gcgggccccc gtcaattcct ttgagtttca
      361 ccgttgccgg cgtactcccc aggtggaata cttaacgctt tcgcttggcc gcttaccgta
      421 tatcgcaaac agcgagtatt catcgtttac tgtgtggact accagggtat ctaatcctgt
      481 ttgataccca cactttcgag catcagtgtc agttgcagtc cagtgagctg ccttcgcaat
      541 cggagttctt cgtgatatct aagcatttca ccgctacacc acgaattccg cccacctcta
      601 ctgtactcaa gactgccagt atcaactgca attttacggt tgagccgcaa actttcacaa
      661 ctgacttaac aatccaccta cgctcccttt aaacccaata aatccggata acgctcggat
      721 cctccgtatt accgcggctg ctggcacgga gttagccgat ccttattcat acggtacata
      781 caaaaatcca cacgtggatc actttattcc cgtataaaag aagtttacaa cccatagggc
      841 agtcatcctt cacgctactt ggctggttca gactcccgtc cattgaccaa tattcctcac
      901 tgctgcctcc cgtaggagtt tggaccgtgt ctcagttcca atgtggggga ccttcctctc
      961 agaaccccta tccatcgaag gtttggtgag ccgttacctc accaactgcc taatggaacg
     1021 catccccatc gataaccgaa attctttaat aggattatca tgcgataatc ctatgccatc
     1081 aggtattaat ctttctttcg aaaggctatc cctgagttat cggcaggttg gatacgtgtt
     1141 actcacccgt gcgccggtcg ccatctttag tttgcttgca aactaaaatg ctgcccctcg
     1201 acttgcatgt gttaagcctg tagctagcgt tcatcctgag ccaggatcaa actcttcatt
     1261 gtaaaagtat cttttcatct gttaagatga ttttcttgct ctgttcagga tgccgta
//
