LOCUS       NZ_OY725807              641 bp    DNA     circular CON 06-DEC-2023
DEFINITION  Parabacteroides distasonis strain Parabacteroides distasonis
            TSDC17.2-1.1 plasmid 62, complete sequence.
ACCESSION   NZ_OY725807
VERSION     NZ_OY725807.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA114266242
            Sequence Read Archive: ERR11836198, ERR11836210
            Assembly: GCF_963360645.1
KEYWORDS    RefSeq.
SOURCE      Parabacteroides distasonis
  ORGANISM  Parabacteroides distasonis
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae;
            Parabacteroides.
REFERENCE   1
  AUTHORS   Beller W,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2023) WASHINGTON UNIVERSITY CENTER FOR GENOME
            SCIENCES, Jeffrey I Gordon Lab, 4523 Clayton Avenue, MSC
            8510-41-4209, St. Louis, MO 63110, USA
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/06/2023 16:00:19
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,487
            CDSs (total)                      :: 4,412
            Genes (coding)                    :: 4,304
            CDSs (with protein)               :: 4,304
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 32 of 108
            Pseudo Genes (incomplete)         :: 69 of 108
            Pseudo Genes (internal stop)      :: 22 of 108
            Pseudo Genes (multiple problems)  :: 13 of 108
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OY725807.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Parabacteroides distasonis"
                     /mol_type="genomic DNA"
                     /strain="Parabacteroides distasonis TSDC17.2-1.1"
                     /db_xref="taxon:823"
                     /plasmid="62"
                     /geo_loc_name="USA"
                     /collection_date="2021-09"
     gene            complement(join(612..641,1..96))
                     /locus_tag="UNS60_RS19360"
     CDS             complement(join(612..641,1..96))
                     /locus_tag="UNS60_RS19360"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_320643423.1"
                     /translation="MKKYLVYMTCAAAAMIGGTGCSDFGDVNMDPEDSAISPCRS"
                     /name="hypothetical protein"
     gene            complement(121..>639)
                     /locus_tag="UNS60_RS19365"
                     /old_locus_tag="PDTSDC17_04572"
                     /pseudo=""
     CDS             complement(121..>639)
                     /locus_tag="UNS60_RS19365"
                     /old_locus_tag="PDTSDC17_04572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010537590.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /name="hypothetical protein"
ORIGIN
        1 ctccgggtcc atattcacat ccccgaaatc gctgcaaccc gttcccccga tcatggccgc
       61 ggcggcgcac gtcatatata ctaaatactt tttcatacta ttatacttct tcaaacgtga
      121 ttagaatttg acattgacat tgaaaccgat atttctcgtg gccggataac cgttcaactc
      181 caagccctgt ccgttcgtgt tgttgtaagc tgactcggga tcgatgttat cggtatgctt
      241 caagatagtc cataggttac gtcccaccaa cgagacgctc aagcccttca ccaccttcat
      301 cttgttcaag acagactgcg ggaaggtata gccgagcgac aactcacgca acttgatgaa
      361 gctggcattg tagacgaact cctcggcgat attattgttg acgatcccct tgtgataatc
      421 ctgcgcgttt accgccacgt tgttctctcc aaggatcttt ccattgtcat ctatcatgac
      481 accggcaccg ataaagccac tgcctcccgg gttatcgacc gtacggccaa gcaacgtacc
      541 cttgtgcaga ccctcgctgt agagcgagta gttcgtgccg gagaagaggc ttgcgcctgc
      601 cttgtagtca atcaagaacg acaaggagaa atcgcggaat c
//
