LOCUS       NZ_OY725802             1477 bp    DNA     circular CON 06-DEC-2023
DEFINITION  Parabacteroides distasonis strain Parabacteroides distasonis
            TSDC17.2-1.1 plasmid 57, complete sequence.
ACCESSION   NZ_OY725802
VERSION     NZ_OY725802.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA114266242
            Sequence Read Archive: ERR11836198, ERR11836210
            Assembly: GCF_963360645.1
KEYWORDS    RefSeq.
SOURCE      Parabacteroides distasonis
  ORGANISM  Parabacteroides distasonis
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae;
            Parabacteroides.
REFERENCE   1
  AUTHORS   Beller W,Z.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2023) WASHINGTON UNIVERSITY CENTER FOR GENOME
            SCIENCES, Jeffrey I Gordon Lab, 4523 Clayton Avenue, MSC
            8510-41-4209, St. Louis, MO 63110, USA
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/06/2023 16:00:19
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,487
            CDSs (total)                      :: 4,412
            Genes (coding)                    :: 4,304
            CDSs (with protein)               :: 4,304
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 70
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 108
            CDSs (without protein)            :: 108
            Pseudo Genes (ambiguous residues) :: 0 of 108
            Pseudo Genes (frameshifted)       :: 32 of 108
            Pseudo Genes (incomplete)         :: 69 of 108
            Pseudo Genes (internal stop)      :: 22 of 108
            Pseudo Genes (multiple problems)  :: 13 of 108
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OY725802.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1477
                     /organism="Parabacteroides distasonis"
                     /mol_type="genomic DNA"
                     /strain="Parabacteroides distasonis TSDC17.2-1.1"
                     /db_xref="taxon:823"
                     /plasmid="57"
                     /geo_loc_name="USA"
                     /collection_date="2021-09"
     gene            233..1450
                     /locus_tag="UNS60_RS19330"
                     /old_locus_tag="PDTSDC17_04569"
     CDS             233..1450
                     /locus_tag="UNS60_RS19330"
                     /old_locus_tag="PDTSDC17_04569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013610935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="WP_008778838.1"
                     /translation="MTSSNLLMQYQSECFEALKSVSKVSKPFEKVLMDTLKLFMAIPGK
                     VNFLQMGRYGEFSEQTYRNNFENEAFDWFAFNEYLVRKVLNGKFLAIAVDPSFLPKSGK
                     KTPWIGRFWSGVAGEMKRGQEIFGVGVIDVENHDCMTLSAPQTPDAKSLEEMDYNLVEW
                     YCQNLIILKEKLQKISRLVVADAFFSKETFVNPLLKEGFHVISRFRNDAVLFYPTLQKP
                     TGKRGHPKWYDGKVDFANLDLSRCEEIEVDKGRLIGLKAYSKSLKRSIKVVVWYPDEED
                     TTKWQIYFSTDDSMSTKDVIDCYRTRFQLEFCFRDAKHYAGLNDCQSTDLRKLEFHRNA
                     SFASINIAKVACKELGIPFSISSCKSIIHNAYMLNRFICVFGLQPDSQVIDKLFKELVL
                     FTARAA"
                     /name="transposase"
ORIGIN
        1 acaatacttc ggtaaaaatt taccgcgcta aaagttaaac atttgaagcc ggctatccgg
       61 tttcactata taaaagttca ttgaaatact gtcaataact atcgcttgag caagctgtaa
      121 aaggtctaga aaagactctg aaaaattgtc taaaatattg ataattaggc aataaaagta
      181 ttgcataagt cgctgattat tagtaactta gagtattcca ccactttaag ttatgacatc
      241 ctcaaaccta cttatgcaat accaatccga gtgcttcgag gccctcaaat cagtatcaaa
      301 ggtaagcaaa ccttttgaga aagtgcttat ggatacgcta aaactcttca tggcaattcc
      361 tggcaaggtc aatttccttc agatgggtcg gtatggtgag ttctccgaac agacctaccg
      421 taacaacttc gagaacgagg ctttcgactg gtttgccttt aacgagtatc tcgtcagaaa
      481 ggttctcaat ggaaagtttc tggccatcgc cgtcgatcct agttttcttc ccaagtccgg
      541 aaagaagacg ccttggatag gacgtttctg gtccggagtt gctggcgaga tgaagcgcgg
      601 tcaggagatc ttcggagtcg gtgtcattga cgtggaaaac cacgattgta tgacgctgag
      661 tgctccacaa actcccgacg ccaagtctct tgaggagatg gactacaacc ttgtcgaatg
      721 gtactgtcag aacctgatta tcctaaagga aaaactccag aagatatcac gcctggtagt
      781 tgccgacgca ttcttctcaa aagagacgtt cgtcaaccct ctgctcaagg aaggcttcca
      841 cgtgataagc aggttccgca acgatgcggt tctgttctat ccgacccttc agaagccaac
      901 cggaaagaga ggtcatccga agtggtatga tggaaaggtt gactttgcta atcttgatct
      961 ctccagatgt gaggagattg aagttgacaa aggccgtcta atcggtctga aggcttattc
     1021 caagtcactt aaacgctcca tcaaggttgt cgtatggtat cctgatgaag aggatacgac
     1081 aaagtggcaa atttacttca gcactgatga ctcaatgagt accaaggatg taattgactg
     1141 ctatagaact cgtttccagc tggagttctg tttcagagat gcgaagcact atgccggtct
     1201 taacgactgc cagtcaaccg acctcagaaa actcgagttc cataggaacg catcattcgc
     1261 tagcatcaat atcgccaagg tcgcctgcaa ggaactggga ataccgttct caatatcatc
     1321 ctgcaagtcg atcatccata acgcttatat gctcaatcga tttatttgcg tgttcggtct
     1381 gcaaccggac tcacaagtta ttgacaaact tttcaaagaa ctggttttat ttactgccag
     1441 ggccgcttag ggcctggaaa atttaacgaa ctattga
//
