LOCUS       NZ_OW970566             4715 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P6, complete sequence.
ACCESSION   NZ_OW970566
VERSION     NZ_OW970566.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082325
            Assembly: GCF_903993025.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993025.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:25:28
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,611
            CDSs (total)                      :: 5,489
            Genes (coding)                    :: 5,351
            CDSs (with protein)               :: 5,351
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 138
            CDSs (without protein)            :: 138
            Pseudo Genes (ambiguous residues) :: 0 of 138
            Pseudo Genes (frameshifted)       :: 49 of 138
            Pseudo Genes (incomplete)         :: 87 of 138
            Pseudo Genes (internal stop)      :: 18 of 138
            Pseudo Genes (multiple problems)  :: 14 of 138
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970566.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P6"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(join(4641..4715,1..882))
                     /locus_tag="LQV17_RS27885"
     CDS             complement(join(4641..4715,1..882))
                     /locus_tag="LQV17_RS27885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            1958..2152
                     /locus_tag="LQV17_RS27890"
                     /old_locus_tag="AI2766V1_5301"
     CDS             1958..2152
                     /locus_tag="LQV17_RS27890"
                     /old_locus_tag="AI2766V1_5301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            2806..2919
                     /locus_tag="LQV17_RS28090"
     CDS             2806..2919
                     /locus_tag="LQV17_RS28090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(3141..3809)
                     /locus_tag="LQV17_RS27895"
                     /old_locus_tag="AI2766V1_5302"
     CDS             complement(3141..3809)
                     /locus_tag="LQV17_RS27895"
                     /old_locus_tag="AI2766V1_5302"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(3791..4657)
                     /locus_tag="LQV17_RS27900"
                     /old_locus_tag="AI2766V1_5303"
     CDS             complement(3791..4657)
                     /locus_tag="LQV17_RS27900"
                     /old_locus_tag="AI2766V1_5303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     Typing          complement(1444..1699)
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(1824..1922)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          complement(2226..2310)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          2321..2878
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.831"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gaatggactc tttggagata gcactttcga actacctctg tatttacccg cctcttgttt
       61 ccattcgctt atttttttat tattaacccc aataattcta tccaaaatga atccaaccct
      121 taccttgtca atatgacggc caagcttatc gacttccttt ataatcagag gtgcatattt
      181 tttaccgtgc tcaataaatg attccaatac atgctcctca ccaccacagt aatcaggccg
      241 cctggtcata tccataaagg tcttaccgat agatgatacc ctgacagggg aattacgagc
      301 cttcattggc tcaacataat ttgtttcttg tgtaacgata atttttattc cattgacctc
      361 agaatttctt ggaaatctag gcatgaattg tttggcttcg tctatatcag gattatcctt
      421 ttgaaaatca tgatagaact tattcttcca ctgttcggaa cgacatgtcg taaagtggat
      481 tatcttgggt attttatctg tgatgttatg ccaatccata gcggataaat aggataagta
      541 tccatatgga tacgtagagc acactatatc attttccgga gaaccatcgt tacctttaac
      601 aaaaaagacc tcatagaaac cgccaattaa atgggggtaa gcatgatgct tatcgttact
      661 ttcaactctt gataaaaccc ctgactttaa taattttaat atattttttt caaattcatt
      721 aggtcctgct ttgttctttc taatttgata tatcctctca ccattatatt ctttttttaa
      781 ataaaaaagg taaatctgca aagagatttc ttctttggtt atgactggtt ttttatattc
      841 attcaacaac caagacgtta gcgcttcttc gataagatac atattcaacc ttttcggttt
      901 agtctctaat agaatatacg tcctaaggac gtatattcta ttagagattg attgtcaaga
      961 aaaaaataat aacaaacaag catttgccat ttttatattt ttgatatcct ataaaataaa
     1021 tcctaaggat ttattttata ggataataag taggaagtca agaaaaagtt tacttatatc
     1081 accgttttca taacacctca tgcgatcaat tcagcgccgg ttatagttca aatccatgat
     1141 taggacatct gttgctcata aacgatgagc gtaaaagatc atttttcagc gtcatttacc
     1201 ataacgtcgc attacgcgca ccgctaaaac gcgctgaacg cgattctgcc gcgaacaccg
     1261 caaaaagaga tgttctcccc ggggtaaacc ggaaaaatgc gtcaggatcg ctttcagctc
     1321 actgcatagc tatgcatgaa agtgaatgac gatcggtttg ggcgcataca gtgcccatga
     1381 gacacatttt cggacatttt cagttcgtga atccctgact cattgctaca tatctgaaca
     1441 gacaccccta gcagcgcccc caggggcgtc ctgtaaaaaa acacaccgcg ccgctagcag
     1501 cccccctaat ataaaatgat gttttttatg aaaatagtca gtaccacccc taaaaagcgg
     1561 tgttggcgca gctacaacac cgcgccgaca ccgctttttt aaatatcaca aagagagcaa
     1621 gaagaactaa tttgtcataa ctctctattt ataaagaaaa atcagcaaaa aattgttttt
     1681 gcgtggggtg tgggcatttc aggcatgaga acagactcgc gtttttccgg agtatcagcg
     1741 gaattattga ttaagaaaca ctcgacgcag agcgaaattt tatgcaacag cggctgcact
     1801 gcacagggat tatttatcag ttgatatgct gtgccatgat acgtcctaaa aaaacaggac
     1861 aggatgtgca attgtaatac cgtcgcccgc aacgtcttac aattaccacc tggtcagggt
     1921 ccacccgaca cccggtactg acggagaaca acggaaggtg aacaaacagc aacaaactgc
     1981 gctgaatatg gcgcgattta tcaaaagcca gagcctgaca ctgcttgaaa aactggatgc
     2041 tctggatgcc gacgaacagg cggccatgtg cgaacgactg cacgaactcg cggaagaact
     2101 ccagaacagc atccaggttc gctttgagac cgaaagtgaa acaggaacat aacgaagctg
     2161 acggaggcgc tcacggcttg tccgcgagcg ttttcggcag cagacaagcc cgccagggcg
     2221 cgtcagcggg tgtcggggcg aagccctgac ccagtcacgt agcgatagcg gagtgtatac
     2281 tggcttaact atgcggcatc agtgcgaatt gtatgaaaag tgccccatgc cgggtgtgaa
     2341 attccgcaca gatgcgtaag gagaaaatgc gcgtccaggc gcttttccgc ttcctcgctc
     2401 actgactcgc tacgctcggt cgttcggctg cggcgagcgg tactgactta cacaaaaacg
     2461 gcagcacggt tatccacaga atcaggggat aaggccggaa agaacatgtg agcaaaagac
     2521 caagaacagg aagaaggccg cgccgcaggc gtttttccat aggctccgcc cccctgacga
     2581 gcatcacaga aatcgacgct caagtcagag gtggcgaaac ccgacaggac ttaaagatac
     2641 cagacgtttc cccctggtgg ctccctcgtg cgctctcctg ttccgaccct gccgcttacc
     2701 ggatacctgt ccgcctttct cccttcggga agcgtggcgc tttctcatag ctcacgctgt
     2761 tggtatctca gttcggtgta ggtcgttcgc tccaagctgg gctgtgtgca cgaacccccc
     2821 gttcagcccg actgctgcgc cttatccggt aactatcgtc ttgagtccaa cccggtaaga
     2881 cacgccttaa cgccactggc agcagccact ggtaactgat ttagaggagt tagtcttgaa
     2941 gtcatgcgcc agttaaggct aaactgaaag aacaggtttt ggtgactgcg ctcctccaag
     3001 ccagttacct tggttcttcg agccgcaaac tctttgaacc taagagaaaa ccgccccgca
     3061 aaggcggttt ttttctttta cagaaaagag attatctata tgacacgaag atctcaatag
     3121 cttcttcaaa aaacacgaaa tcaagaaggg aatctaacgt agcaaaccgt atgattctct
     3181 gcgttacccg ggatattttt agtaaattta gccaagttag attctgggtt atctttcatg
     3241 aggtcaataa cagtaccatc attaaaatgc tcccaaaacc catcagtaca taaaataacc
     3301 tctttgtttt catcatttaa atcaaaaact gaatgattga aaattatctc atcagagcag
     3361 aaatcaacaa atgatgttag ataatttctg tctgggcaat aacaaacgag gtgaggtatt
     3421 tttttattat cgattccatt ttcctttaat cttttccagg caaccgagtt atcctctgtt
     3481 agaaggactc cacttttgtt atatacacgg caatctcctg cgttatatat atggaggtgc
     3541 gtattatttt taaaaaggaa acatactgca gccttaacag gaactgactt gcatggttca
     3601 ataatatctt tattcagatc accagaaaac acgcacttat ctaacctacc agagagaatt
     3661 ttcatattcc actcagagca ggaataccca tccataataa ccattccaaa cacatcattt
     3721 tgacaattta tcgtagataa taagtctaag ttttcacatc tgttaccaat atcactaaaa
     3781 ctgaacgcta tcatttgaat atatcccacg gaagactttc atagaaacag gcaacttttt
     3841 cataagcatc ttcaaaaaga ggtaatgatt taacggtgga tgataaatcc tgatatcgct
     3901 gactggaacg ctcgataatt tctacatccc ttataccttt aacgtttaag agattatcca
     3961 attgtttacc ttcactcttt tttaaaagag actccagtat tttatactta tcttgccgag
     4021 aaaactcata tttacctaaa agataattga tatcatatat atcttgctct cgatttctct
     4081 ctctaacttt ttgttgcaaa acggatcgat atttttcagc catcaaatca gttaagctgt
     4141 aggtctttac gctatcattg tcatcatcac catctaatga taaaaagtca aaatcatacg
     4201 ttttttcgtt aaagctaaaa tcgatattta tcactgaagg tgattgatta gattcaagcc
     4261 ttttcattgc agacgcatta gaacgatcgc aaaaggctat atttatctgt acagttggaa
     4321 atgttccttg tgcattaggt tgaattttat gagattgaac tttacattta ataccatatc
     4381 ccaattcagc ctcagcaaca tccattgagt cattaaacct attgaaaaaa tcccccaagt
     4441 caatttcaga aagttttttt tcggtagaaa aatcaatatc ctttgtgtat ctatcactac
     4501 catgcttaac accaagaaga gtccctccct tcataaccat catttcattc aaactctcct
     4561 ctatagaaat agatttaagt attatatgta cagcctggcg catcaacctg tacttcccac
     4621 cagactcttc gatccaatta ttaatttctt tttccataag acttaaccat atcaacatta
     4681 atagaaataa accattcttc atcaaagtaa ggtga
//
