LOCUS       NZ_OW970558             4715 bp    DNA     circular CON 20-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P5, complete sequence.
ACCESSION   NZ_OW970558
VERSION     NZ_OW970558.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082328
            Assembly: GCF_903993185.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993185.2-RS_2024_06_20
            Annotation Date                   :: 06/20/2024 04:03:07
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,563
            CDSs (total)                      :: 5,441
            Genes (coding)                    :: 5,309
            CDSs (with protein)               :: 5,309
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 132
            CDSs (without protein)            :: 132
            Pseudo Genes (ambiguous residues) :: 0 of 132
            Pseudo Genes (frameshifted)       :: 49 of 132
            Pseudo Genes (incomplete)         :: 83 of 132
            Pseudo Genes (internal stop)      :: 16 of 132
            Pseudo Genes (multiple problems)  :: 14 of 132
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970558.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P5"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(join(4112..4715,1..263))
                     /locus_tag="LQV20_RS27665"
                     /old_locus_tag="AI2768V1_5254"
     CDS             complement(join(4112..4715,1..263))
                     /locus_tag="LQV20_RS27665"
                     /old_locus_tag="AI2768V1_5254"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     gene            complement(247..1203)
                     /locus_tag="LQV20_RS27670"
                     /old_locus_tag="AI2768V1_5251"
     CDS             complement(247..1203)
                     /locus_tag="LQV20_RS27670"
                     /old_locus_tag="AI2768V1_5251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            2279..2473
                     /locus_tag="LQV20_RS27675"
                     /old_locus_tag="AI2768V1_5252"
     CDS             2279..2473
                     /locus_tag="LQV20_RS27675"
                     /old_locus_tag="AI2768V1_5252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            3127..3240
                     /locus_tag="LQV20_RS27850"
     CDS             3127..3240
                     /locus_tag="LQV20_RS27850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(3462..4130)
                     /locus_tag="LQV20_RS27680"
                     /old_locus_tag="AI2768V1_5253"
     CDS             complement(3462..4130)
                     /locus_tag="LQV20_RS27680"
                     /old_locus_tag="AI2768V1_5253"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     Typing          complement(1765..2020)
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(2145..2243)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          complement(2547..2631)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          2642..3199
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.831"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 gcaacatcca ttgagtcatt aaacctattg aaaaaatccc ccaagtcaat ttcagaaagt
       61 tttttttcgg tagaaaaatc aatatccttt gtgtatctat cactaccatg cttaacacca
      121 agaagagtcc ctcccttcat aaccatcatt tcattcaaac tctcctctat agaaatagat
      181 ttaagtatta tatgtacagc ctggcgcatc aacctgtact tcccaccaga ctcttcgatc
      241 caattattaa tttctttttc cataagactt aaccatatca acattaatag aaataaacca
      301 ttcttcatca aagtaaggtg agaatggact ctttggagat agcactttcg aactacctct
      361 gtatttaccc gcctcttgtt tccattcgct tattttttta ttattaaccc caataattct
      421 atccaaaatg aatccaaccc ttaccttgtc aatatgacgg ccaagcttat cgacttcctt
      481 tataatcaga ggtgcatatt ttttaccgtg ctcaataaat gattccaata catgctcctc
      541 accaccacag taatcaggcc gcctggtcat atccataaag gtcttaccga tagatgatac
      601 cctgacaggg gaattacgag ccttcattgg ctcaacataa tttgtttctt gtgtaacgat
      661 aatttttatt ccattgacct cagaatttct tggaaatcta ggcatgaatt gtttggcttc
      721 gtctatatca ggattatcct tttgaaaatc atgatagaac ttattcttcc actgttcgga
      781 acgacatgtc gtaaagtgga ttatcttggg tattttatct gtgatgttat gccaatccat
      841 agcggataaa taggataagt atccatatgg atacgtagag cacactatat cattttccgg
      901 agaaccatcg ttacctttaa caaaaaagac ctcatagaaa ccgccaatta aatgggggta
      961 agcatgatgc ttatcgttac tttcaactct tgataaaacc cctgacttta ataattttaa
     1021 tatatttttt tcaaattcat taggtcctgc tttgttcttt ctaatttgat atatcctctc
     1081 accattatat tcttttttta aataaaaaag gtaaatctgc aaagagattt cttctttggt
     1141 tatgactggt tttttatatt cattcaacaa ccaagacgtt agcgcttctt cgataagata
     1201 catattcaac cttttcggtt tagtctctaa tagaatatac gtcctaagga cgtatattct
     1261 attagagatt gattgtcaag aaaaaaataa taacaaacaa gcatttgcca tttttatatt
     1321 tttgatatcc tataaaataa atcctaagga tttattttat aggataataa gtaggaagtc
     1381 aagaaaaagt ttacttatat caccgttttc ataacacctc atgcgatcaa ttcagcgccg
     1441 gttatagttc aaatccatga ttaggacatc tgttgctcat aaacgatgag cgtaaaagat
     1501 catttttcag cgtcatttac cataacgtcg cattacgcgc accgctaaaa cgcgctgaac
     1561 gcgattctgc cgcgaacacc gcaaaaagag atgttctccc cggggtaaac cggaaaaatg
     1621 cgtcaggatc gctttcagct cactgcatag ctatgcatga aagtgaatga cgatcggttt
     1681 gggcgcatac agtgcccatg agacacattt tcggacattt tcagttcgtg aatccctgac
     1741 tcattgctac atatctgaac agacacccct agcagcgccc ccaggggcgt cctgtaaaaa
     1801 aacacaccgc gccgctagca gcccccctaa tataaaatga tgttttttat gaaaatagtc
     1861 agtaccaccc ctaaaaagcg gtgttggcgc agctacaaca ccgcgccgac accgcttttt
     1921 taaatatcac aaagagagca agaagaacta atttgtcata actctctatt tataaagaaa
     1981 aatcagcaaa aaattgtttt tgcgtggggt gtgggcattt caggcatgag aacagactcg
     2041 cgtttttccg gagtatcagc ggaattattg attaagaaac actcgacgca gagcgaaatt
     2101 ttatgcaaca gcggctgcac tgcacaggga ttatttatca gttgatatgc tgtgccatga
     2161 tacgtcctaa aaaaacagga caggatgtgc aattgtaata ccgtcgcccg caacgtctta
     2221 caattaccac ctggtcaggg tccacccgac acccggtact gacggagaac aacggaaggt
     2281 gaacaaacag caacaaactg cgctgaatat ggcgcgattt atcaaaagcc agagcctgac
     2341 actgcttgaa aaactggatg ctctggatgc cgacgaacag gcggccatgt gcgaacgact
     2401 gcacgaactc gcggaagaac tccagaacag catccaggtt cgctttgaga ccgaaagtga
     2461 aacaggaaca taacgaagct gacggaggcg ctcacggctt gtccgcgagc gttttcggca
     2521 gcagacaagc ccgccagggc gcgtcagcgg gtgtcggggc gaagccctga cccagtcacg
     2581 tagcgatagc ggagtgtata ctggcttaac tatgcggcat cagtgcgaat tgtatgaaaa
     2641 gtgccccatg ccgggtgtga aattccgcac agatgcgtaa ggagaaaatg cgcgtccagg
     2701 cgcttttccg cttcctcgct cactgactcg ctacgctcgg tcgttcggct gcggcgagcg
     2761 gtactgactt acacaaaaac ggcagcacgg ttatccacag aatcagggga taaggccgga
     2821 aagaacatgt gagcaaaaga ccaagaacag gaagaaggcc gcgccgcagg cgtttttcca
     2881 taggctccgc ccccctgacg agcatcacag aaatcgacgc tcaagtcaga ggtggcgaaa
     2941 cccgacagga cttaaagata ccagacgttt ccccctggtg gctccctcgt gcgctctcct
     3001 gttccgaccc tgccgcttac cggatacctg tccgcctttc tcccttcggg aagcgtggcg
     3061 ctttctcata gctcacgctg ttggtatctc agttcggtgt aggtcgttcg ctccaagctg
     3121 ggctgtgtgc acgaaccccc cgttcagccc gactgctgcg ccttatccgg taactatcgt
     3181 cttgagtcca acccggtaag acacgcctta acgccactgg cagcagccac tggtaactga
     3241 tttagaggag ttagtcttga agtcatgcgc cagttaaggc taaactgaaa gaacaggttt
     3301 tggtgactgc gctcctccaa gccagttacc ttggttcttc gagccgcaaa ctctttgaac
     3361 ctaagagaaa accgccccgc aaaggcggtt tttttctttt acagaaaaga gattatctat
     3421 atgacacgaa gatctcaata gcttcttcaa aaaacacgaa atcaagaagg gaatctaacg
     3481 tagcaaaccg tatgattctc tgcgttaccc gggatatttt tagtaaattt agccaagtta
     3541 gattctgggt tatctttcat gaggtcaata acagtaccat cattaaaatg ctcccaaaac
     3601 ccatcagtac ataaaataac ctctttgttt tcatcattta aatcaaaaac tgaatgattg
     3661 aaaattatct catcagagca gaaatcaaca aatgatgtta gataatttct gtctgggcaa
     3721 taacaaacga ggtgaggtat ttttttatta tcgattccat tttcctttaa tcttttccag
     3781 gcaaccgagt tatcctctgt tagaaggact ccacttttgt tatatacacg gcaatctcct
     3841 gcgttatata tatggaggtg cgtattattt ttaaaaagga aacatactgc agccttaaca
     3901 ggaactgact tgcatggttc aataatatct ttattcagat caccagaaaa cacgcactta
     3961 tctaacctac cagagagaat tttcatattc cactcagagc aggaataccc atccataata
     4021 accattccaa acacatcatt ttgacaattt atcgtagata ataagtctaa gttttcacat
     4081 ctgttaccaa tatcactaaa actgaacgct atcatttgaa tatatcccac ggaagacttt
     4141 catagaaaca ggcaactttt tcataagcat cttcaaaaag aggtaatgat ttaacggtgg
     4201 atgataaatc ctgatatcgc tgactggaac gctcgataat ttctacatcc cttatacctt
     4261 taacgtttaa gagattatcc aattgtttac cttcactctt ttttaaaaga gactccagta
     4321 ttttatactt atcttgccga gaaaactcat atttacctaa aagataattg atatcatata
     4381 tatcttgctc tcgatttctc tctctaactt tttgttgcaa aacggatcga tatttttcag
     4441 ccatcaaatc agttaagctg taggtcttta cgctatcatt gtcatcatca ccatctaatg
     4501 ataaaaagtc aaaatcatac gttttttcgt taaagctaaa atcgatattt atcactgaag
     4561 gtgattgatt agattcaagc cttttcattg cagacgcatt agaacgatcg caaaaggcta
     4621 tatttatctg tacagttgga aatgttcctt gtgcattagg ttgaatttta tgagattgaa
     4681 ctttacattt aataccatat cccaattcag cctca
//
