LOCUS       NZ_OW970537             2674 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P7, complete sequence.
ACCESSION   NZ_OW970537
VERSION     NZ_OW970537.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082331
            Assembly: GCF_903993215.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993215.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:17:54
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,538
            CDSs (total)                      :: 5,416
            Genes (coding)                    :: 5,287
            CDSs (with protein)               :: 5,287
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 49 of 129
            Pseudo Genes (incomplete)         :: 79 of 129
            Pseudo Genes (internal stop)      :: 17 of 129
            Pseudo Genes (multiple problems)  :: 14 of 129
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970537.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P7"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(join(2300..2674,1..909))
                     /locus_tag="LQV07_RS27570"
     CDS             complement(join(2300..2674,1..909))
                     /locus_tag="LQV07_RS27570"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="WP_163495232.1"
                     /translation="MKSQFMHVELYSREEPAKKTINKSKNLNHQSDVRTTTVSGVLSEM
                     KREEGFTSHLESIHAPDVLYGSISDLERSIERYEAEFKTTDKNGKEKKLRKDACILLAG
                     VVSLDRADEEIWEEYKKSSIEYLKNKYGENLKCVVEHTDETNPHFHFYVVGNQKQDLNL
                     LHDGKLAVSKLAKEDKKKLHQTVYTEAMIKFQDDFYTKVSNKFGLSRTGEEPRERYKSR
                     PDYLRFKKRQETALNILSDIEEFEADIKEKARKTGYSKGAKQFQNKTWVIKVGEAIKLL
                     GKEHKAELDQKEKDLEKIKKEKTEIETELNLKKEELSNAYSQRNEASRKNSVYIDKVNA
                     LKKENKLLLPYKDQFDLKLQQEKEPLQAEVKELTSENTNLKNENSELKKENLDFKEFIL
                     GVKNYYGSKFQEWYEEVFNPKTKTKPKF"
                     /name="plasmid recombination protein"
     gene            complement(1153..1752)
                     /locus_tag="LQV07_RS27575"
                     /old_locus_tag="AI3065V1_5236"
     CDS             complement(1153..1752)
                     /locus_tag="LQV07_RS27575"
                     /old_locus_tag="AI3065V1_5236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_094327210.1"
                     /translation="MAKAKVLIDDTEEAIIKNALDVDDMNEVNINVTRKKKTGFLGTYS
                     IVFHDSVKTLSKMNLKPNAYKIVMYLFGIIEMGNILVNFSQKKIADDLGLQPSNVSRAF
                     KELFEKKVLIKDSEDGHVYLNSNLCTMGVPKNFDQKRMKSLQKSNIETEDFKNQINLFT
                     PTNTTKIKTNDKKVIKKKEKENVLEFPMQNDWVDIE"
                     /name="helix-turn-helix domain-containing protein"
ORIGIN
        1 tttttctttt tttatttttt ctaagtcttt ttctttttga tctaattctg ctttatgctc
       61 ttttccaagt aatttaattg cctcaccaac tttaattacc catgttttat tttgaaattg
      121 ttttgcacct ttactatatc cagttttcct tgctttttct ttaatatcag cttcaaattc
      181 ttctatatca gacaatatat ttaatgctgt ttcttgtctt tttttaaatc tcaagtaatc
      241 agggcgggat ttatagcgtt ctcgcggctc ctcgcccgtt ctgctcaatc caaatttatt
      301 agataccttt gtataaaaat catcttgaaa tttgatcata gcttctgtgt agactgtttg
      361 atgtaatttt ttcttatctt cttttgctaa tttagatact gcgagctttc catcatgaag
      421 caaatttaaa tcttgttttt gattaccgac cacataaaag tgaaaatgtg ggtttgtttc
      481 gtctgtatgc tcaacaacac attttaaatt ttcaccatat ttatttttca aatattcaat
      541 agatgatttc ttgtattctt cccaaatttc ttcatctgct cgatctagag aaaccacacc
      601 agcaagcaag atgcatgcat ctttgcgtag cttcttctct ttgccgtttt tatcagtagt
      661 cttaaattca gcctcgtaac gctctataga gcgttctaga tcgcttatag agccatacag
      721 cacatcaggt gcatgtatgc tctctaaatg tgatgtaaaa ccttcttccc ttttcatttc
      781 tgacaacaca ccggaaacgg ttgttgttct aacatcagat tgatgattta gatttttact
      841 tttatttatt gtcttttttg ctggttcttc tctgctgtag agttctacat gcataaattg
      901 tgatttcatt ttcaattctc ctatatttta atttccctta tatatgtaat taacagttat
      961 tgtttttctg tcaatagcta taggaaccga ctatatctat tacgctagca tatttcatat
     1021 gctgctccat agatgcggcc ctacggggtt aaagtcaact tcaaaacaaa aaagcaaatc
     1081 cctaaacctt gcaaatttta tatttgcgag gtttagggat tcagcaaacg aagtgcggta
     1141 gtattagttt tactattcaa tatcaaccca atcattttgc attggaaact ctaaaacgtt
     1201 ttctttttcc tttttcttga taactttctt atcattggtt tttatttttg ttgtatttgt
     1261 aggagtaaat aaattgatct gatttttaaa atcttcagtt tcaatatttg atttttgtaa
     1321 acttttcatt ctcttttgat caaaattttt cggaacaccc atagtgcata gatttgaatt
     1381 caagtaaacg tgtccgtctt cgctatcttt gattaaaact tttttttcaa aaagttcttt
     1441 gaaagctctt gatacgtttg aaggctgcaa acctaaatca tcagcaatct ttttctgtga
     1501 gaagttaact aaaatattac ccatctctat tatgccaaat aagtacatta caatcttata
     1561 tgcattaggc tttaagttca ttttagatag tgttttcaca gagtcatgaa aaactattga
     1621 ataagttcct aaaaacccag ttttcttctt tctcgtgacg ttaatgttta cttcattcat
     1681 atcatcaaca tctaatgcat tttttattat tgcttcttct gtatcgtcta ttaaaacttt
     1741 tgcttttgcc atttttatat tcctttttgt agtaaaaata ataatctatg ttgcatttat
     1801 aaccgatcta aatgcaatgt caatatcaaa acgataagaa agttatcgtt tcaacatcaa
     1861 atcatatcaa tgcacctgta tgcaaaatta tgattttcat aagtctgatt atgattttca
     1921 taattttgca ttatgatttt cataatcgaa aattatgatt ttcataattt tttttttggt
     1981 aaagtgttga tatataaggc tttaaagggt gcttaagaag taagaaaata agaaagaaga
     2041 aaccgtaact tcaactgcct taccgcctcc ccttcgggtc gttggacaac cgctcaaacc
     2101 acagaaccag aggttctgca gttttcacgg ttcacggttt aagtattttt tctttataag
     2161 ttattgatat ttaaaggtta ctaactgcgt gcaaactact ttttttggga taaatcccag
     2221 ctatgacagc taaacgctgt caggccgctt ctggtggtgt ctcatacacc acataggcgg
     2281 caaatatgaa aatattcaat taaaatttgg gttttgtttt tgtttttggg ttgaatactt
     2341 cctcgtacca ttcctgaaat ttagatccat agtaattttt aacacccaaa ataaattctt
     2401 tgaaatctaa attttctttt ttcagttctg aattctcatt tttcaaattg gtattttcag
     2461 aagtcaactc tttgacttct gcttgtaatg gctctttttc ctgctgtaat ttcaaatcaa
     2521 attgatcttt gtatggaagt aataatttat tttctttttt tagagcgttt actttatcaa
     2581 tataaacgct gttttttctc gatgcttcat ttctttgact atatgcatta gataattctt
     2641 cttttttcaa attaagctca gtttcaattt ctgt
//
