LOCUS       NZ_OW970535             4715 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P5, complete sequence.
ACCESSION   NZ_OW970535
VERSION     NZ_OW970535.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082331
            Assembly: GCF_903993215.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993215.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:17:54
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,538
            CDSs (total)                      :: 5,416
            Genes (coding)                    :: 5,287
            CDSs (with protein)               :: 5,287
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 49 of 129
            Pseudo Genes (incomplete)         :: 79 of 129
            Pseudo Genes (internal stop)      :: 17 of 129
            Pseudo Genes (multiple problems)  :: 14 of 129
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970535.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P5"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            376..489
                     /locus_tag="LQV07_RS27735"
     CDS             376..489
                     /locus_tag="LQV07_RS27735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(711..1379)
                     /locus_tag="LQV07_RS27520"
                     /old_locus_tag="AI3065V1_5228"
     CDS             complement(711..1379)
                     /locus_tag="LQV07_RS27520"
                     /old_locus_tag="AI3065V1_5228"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(1361..2227)
                     /locus_tag="LQV07_RS27525"
                     /old_locus_tag="AI3065V1_5229"
     CDS             complement(1361..2227)
                     /locus_tag="LQV07_RS27525"
                     /old_locus_tag="AI3065V1_5229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     gene            complement(2211..3167)
                     /locus_tag="LQV07_RS27530"
                     /old_locus_tag="AI3065V1_5230"
     CDS             complement(2211..3167)
                     /locus_tag="LQV07_RS27530"
                     /old_locus_tag="AI3065V1_5230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            4243..4437
                     /locus_tag="LQV07_RS27535"
                     /old_locus_tag="AI3065V1_5231"
     CDS             4243..4437
                     /locus_tag="LQV07_RS27535"
                     /old_locus_tag="AI3065V1_5231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     Typing          complement(3729..3984)
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(4109..4207)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          complement(4511..4595)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          2..448
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.432"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 cggcgagcgg tactgactta cacaaaaacg gcagcacggt tatccacaga atcaggggat
       61 aaggccggaa agaacatgtg agcaaaagac caagaacagg aagaaggccg cgccgcaggc
      121 gtttttccat aggctccgcc cccctgacga gcatcacaga aatcgacgct caagtcagag
      181 gtggcgaaac ccgacaggac ttaaagatac cagacgtttc cccctggtgg ctccctcgtg
      241 cgctctcctg ttccgaccct gccgcttacc ggatacctgt ccgcctttct cccttcggga
      301 agcgtggcgc tttctcatag ctcacgctgt tggtatctca gttcggtgta ggtcgttcgc
      361 tccaagctgg gctgtgtgca cgaacccccc gttcagcccg actgctgcgc cttatccggt
      421 aactatcgtc ttgagtccaa cccggtaaga cacgccttaa cgccactggc agcagccact
      481 ggtaactgat ttagaggagt tagtcttgaa gtcatgcgcc agttaaggct aaactgaaag
      541 aacaggtttt ggtgactgcg ctcctccaag ccagttacct tggttcttcg agccgcaaac
      601 tctttgaacc taagagaaaa ccgccccgca aaggcggttt ttttctttta cagaaaagag
      661 attatctata tgacacgaag atctcaatag cttcttcaaa aaacacgaaa tcaagaaggg
      721 aatctaacgt agcaaaccgt atgattctct gcgttacccg ggatattttt agtaaattta
      781 gccaagttag attctgggtt atctttcatg aggtcaataa cagtaccatc attaaaatgc
      841 tcccaaaacc catcagtaca taaaataacc tctttgtttt catcatttaa atcaaaaact
      901 gaatgattga aaattatctc atcagagcag aaatcaacaa atgatgttag ataatttctg
      961 tctgggcaat aacaaacgag gtgaggtatt tttttattat cgattccatt ttcctttaat
     1021 cttttccagg caaccgagtt atcctctgtt agaaggactc cacttttgtt atatacacgg
     1081 caatctcctg cgttatatat atggaggtgc gtattatttt taaaaaggaa acatactgca
     1141 gccttaacag gaactgactt gcatggttca ataatatctt tattcagatc accagaaaac
     1201 acgcacttat ctaacctacc agagagaatt ttcatattcc actcagagca ggaataccca
     1261 tccataataa ccattccaaa cacatcattt tgacaattta tcgtagataa taagtctaag
     1321 ttttcacatc tgttaccaat atcactaaaa ctgaacgcta tcatttgaat atatcccacg
     1381 gaagactttc atagaaacag gcaacttttt cataagcatc ttcaaaaaga ggtaatgatt
     1441 taacggtgga tgataaatcc tgatatcgct gactggaacg ctcgataatt tctacatccc
     1501 ttataccttt aacgtttaag agattatcca attgtttacc ttcactcttt tttaaaagag
     1561 actccagtat tttatactta tcttgccgag aaaactcata tttacctaaa agataattga
     1621 tatcatatat atcttgctct cgatttctct ctctaacttt ttgttgcaaa acggatcgat
     1681 atttttcagc catcaaatca gttaagctgt aggtctttac gctatcattg tcatcatcac
     1741 catctaatga taaaaagtca aaatcatacg ttttttcgtt aaagctaaaa tcgatattta
     1801 tcactgaagg tgattgatta gattcaagcc ttttcattgc agacgcatta gaacgatcgc
     1861 aaaaggctat atttatctgt acagttggaa atgttccttg tgcattaggt tgaattttat
     1921 gagattgaac tttacattta ataccatatc ccaattcagc ctcagcaaca tccattgagt
     1981 cattaaacct attgaaaaaa tcccccaagt caatttcaga aagttttttt tcggtagaaa
     2041 aatcaatatc ctttgtgtat ctatcactac catgcttaac accaagaaga gtccctccct
     2101 tcataaccat catttcattc aaactctcct ctatagaaat agatttaagt attatatgta
     2161 cagcctggcg catcaacctg tacttcccac cagactcttc gatccaatta ttaatttctt
     2221 tttccataag acttaaccat atcaacatta atagaaataa accattcttc atcaaagtaa
     2281 ggtgagaatg gactctttgg agatagcact ttcgaactac ctctgtattt acccgcctct
     2341 tgtttccatt cgcttatttt tttattatta accccaataa ttctatccaa aatgaatcca
     2401 acccttacct tgtcaatatg acggccaagc ttatcgactt cctttataat cagaggtgca
     2461 tattttttac cgtgctcaat aaatgattcc aatacatgct cctcaccacc acagtaatca
     2521 ggccgcctgg tcatatccat aaaggtctta ccgatagatg ataccctgac aggggaatta
     2581 cgagccttca ttggctcaac ataatttgtt tcttgtgtaa cgataatttt tattccattg
     2641 acctcagaat ttcttggaaa tctaggcatg aattgtttgg cttcgtctat atcaggatta
     2701 tccttttgaa aatcatgata gaacttattc ttccactgtt cggaacgaca tgtcgtaaag
     2761 tggattatct tgggtatttt atctgtgatg ttatgccaat ccatagcgga taaataggat
     2821 aagtatccat atggatacgt agagcacact atatcatttt ccggagaacc atcgttacct
     2881 ttaacaaaaa agacctcata gaaaccgcca attaaatggg ggtaagcatg atgcttatcg
     2941 ttactttcaa ctcttgataa aacccctgac tttaataatt ttaatatatt tttttcaaat
     3001 tcattaggtc ctgctttgtt ctttctaatt tgatatatcc tctcaccatt atattctttt
     3061 tttaaataaa aaaggtaaat ctgcaaagag atttcttctt tggttatgac tggtttttta
     3121 tattcattca acaaccaaga cgttagcgct tcttcgataa gatacatatt caaccttttc
     3181 ggtttagtct ctaatagaat atacgtccta aggacgtata ttctattaga gattgattgt
     3241 caagaaaaaa ataataacaa acaagcattt gccattttta tatttttgat atcctataaa
     3301 ataaatccta aggatttatt ttataggata ataagtagga agtcaagaaa aagtttactt
     3361 atatcaccgt tttcataaca cctcatgcga tcaattcagc gccggttata gttcaaatcc
     3421 atgattagga catctgttgc tcataaacga tgagcgtaaa agatcatttt tcagcgtcat
     3481 ttaccataac gtcgcattac gcgcaccgct aaaacgcgct gaacgcgatt ctgccgcgaa
     3541 caccgcaaaa agagatgttc tccccggggt aaaccggaaa aatgcgtcag gatcgctttc
     3601 agctcactgc atagctatgc atgaaagtga atgacgatcg gtttgggcgc atacagtgcc
     3661 catgagacac attttcggac attttcagtt cgtgaatccc tgactcattg ctacatatct
     3721 gaacagacac ccctagcagc gcccccaggg gcgtcctgta aaaaaacaca ccgcgccgct
     3781 agcagccccc ctaatataaa atgatgtttt ttatgaaaat agtcagtacc acccctaaaa
     3841 agcggtgttg gcgcagctac aacaccgcgc cgacaccgct tttttaaata tcacaaagag
     3901 agcaagaaga actaatttgt cataactctc tatttataaa gaaaaatcag caaaaaattg
     3961 tttttgcgtg gggtgtgggc atttcaggca tgagaacaga ctcgcgtttt tccggagtat
     4021 cagcggaatt attgattaag aaacactcga cgcagagcga aattttatgc aacagcggct
     4081 gcactgcaca gggattattt atcagttgat atgctgtgcc atgatacgtc ctaaaaaaac
     4141 aggacaggat gtgcaattgt aataccgtcg cccgcaacgt cttacaatta ccacctggtc
     4201 agggtccacc cgacacccgg tactgacgga gaacaacgga aggtgaacaa acagcaacaa
     4261 actgcgctga atatggcgcg atttatcaaa agccagagcc tgacactgct tgaaaaactg
     4321 gatgctctgg atgccgacga acaggcggcc atgtgcgaac gactgcacga actcgcggaa
     4381 gaactccaga acagcatcca ggttcgcttt gagaccgaaa gtgaaacagg aacataacga
     4441 agctgacgga ggcgctcacg gcttgtccgc gagcgttttc ggcagcagac aagcccgcca
     4501 gggcgcgtca gcgggtgtcg gggcgaagcc ctgacccagt cacgtagcga tagcggagtg
     4561 tatactggct taactatgcg gcatcagtgc gaattgtatg aaaagtgccc catgccgggt
     4621 gtgaaattcc gcacagatgc gtaaggagaa aatgcgcgtc caggcgcttt tccgcttcct
     4681 cgctcactga ctcgctacgc tcggtcgttc ggctg
//
