LOCUS       NZ_OW970500             2674 bp    DNA     circular CON 20-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P8, complete sequence.
ACCESSION   NZ_OW970500
VERSION     NZ_OW970500.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082332
            Assembly: GCF_903993145.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993145.2-RS_2024_06_20
            Annotation Date                   :: 06/20/2024 03:56:42
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,547
            CDSs (total)                      :: 5,426
            Genes (coding)                    :: 5,289
            CDSs (with protein)               :: 5,289
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 49 of 137
            Pseudo Genes (incomplete)         :: 87 of 137
            Pseudo Genes (internal stop)      :: 17 of 137
            Pseudo Genes (multiple problems)  :: 14 of 137
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970500.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P8"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            join(2522..2674,1..447)
                     /locus_tag="LQV37_RS27610"
                     /old_locus_tag="AI2996V1_5239"
     CDS             join(2522..2674,1..447)
                     /locus_tag="LQV37_RS27610"
                     /old_locus_tag="AI2996V1_5239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_094327210.1"
                     /translation="MAKAKVLIDDTEEAIIKNALDVDDMNEVNINVTRKKKTGFLGTYS
                     IVFHDSVKTLSKMNLKPNAYKIVMYLFGIIEMGNILVNFSQKKIADDLGLQPSNVSRAF
                     KELFEKKVLIKDSEDGHVYLNSNLCTMGVPKNFDQKRMKSLQKSNIETEDFKNQINLFT
                     PTNTTKIKTNDKKVIKKKEKENVLEFPMQNDWVDIE"
                     /name="helix-turn-helix domain-containing protein"
     gene            691..1974
                     /locus_tag="LQV37_RS27615"
                     /old_locus_tag="AI2996V1_5240"
     CDS             691..1974
                     /locus_tag="LQV37_RS27615"
                     /old_locus_tag="AI2996V1_5240"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="WP_163495232.1"
                     /translation="MKSQFMHVELYSREEPAKKTINKSKNLNHQSDVRTTTVSGVLSEM
                     KREEGFTSHLESIHAPDVLYGSISDLERSIERYEAEFKTTDKNGKEKKLRKDACILLAG
                     VVSLDRADEEIWEEYKKSSIEYLKNKYGENLKCVVEHTDETNPHFHFYVVGNQKQDLNL
                     LHDGKLAVSKLAKEDKKKLHQTVYTEAMIKFQDDFYTKVSNKFGLSRTGEEPRERYKSR
                     PDYLRFKKRQETALNILSDIEEFEADIKEKARKTGYSKGAKQFQNKTWVIKVGEAIKLL
                     GKEHKAELDQKEKDLEKIKKEKTEIETELNLKKEELSNAYSQRNEASRKNSVYIDKVNA
                     LKKENKLLLPYKDQFDLKLQQEKEPLQAEVKELTSENTNLKNENSELKKENLDFKEFIL
                     GVKNYYGSKFQEWYEEVFNPKTKTKPKF"
                     /name="plasmid recombination protein"
ORIGIN
        1 gtgaaaacac tatctaaaat gaacttaaag cctaatgcat ataagattgt aatgtactta
       61 tttggcataa tagagatggg taatatttta gttaacttct cacagaaaaa gattgctgat
      121 gatttaggtt tgcagccttc aaacgtatca agagctttca aagaactttt tgaaaaaaaa
      181 gttttaatca aagatagcga agacggacac gtttacttga attcaaatct atgcactatg
      241 ggtgttccga aaaattttga tcaaaagaga atgaaaagtt tacaaaaatc aaatattgaa
      301 actgaagatt ttaaaaatca gatcaattta tttactccta caaatacaac aaaaataaaa
      361 accaatgata agaaagttat caagaaaaag gaaaaagaaa acgttttaga gtttccaatg
      421 caaaatgatt gggttgatat tgaatagtaa aactaatact accgcacttc gtttgctgaa
      481 tccctaaacc tcgcaaatat aaaatttgca aggtttaggg atttgctttt ttgttttgaa
      541 gttgacttta accccgtagg gccgcatcta tggagcagca tatgaaatat gctagcgtaa
      601 tagatatagt cggttcctat agctattgac agaaaaacaa taactgttaa ttacatatat
      661 aagggaaatt aaaatatagg agaattgaaa atgaaatcac aatttatgca tgtagaactc
      721 tacagcagag aagaaccagc aaaaaagaca ataaataaaa gtaaaaatct aaatcatcaa
      781 tctgatgtta gaacaacaac cgtttccggt gtgttgtcag aaatgaaaag ggaagaaggt
      841 tttacatcac atttagagag catacatgca cctgatgtgc tgtatggctc tataagcgat
      901 ctagaacgct ctatagagcg ttacgaggct gaatttaaga ctactgataa aaacggcaaa
      961 gagaagaagc tacgcaaaga tgcatgcatc ttgcttgctg gtgtggtttc tctagatcga
     1021 gcagatgaag aaatttggga agaatacaag aaatcatcta ttgaatattt gaaaaataaa
     1081 tatggtgaaa atttaaaatg tgttgttgag catacagacg aaacaaaccc acattttcac
     1141 ttttatgtgg tcggtaatca aaaacaagat ttaaatttgc ttcatgatgg aaagctcgca
     1201 gtatctaaat tagcaaaaga agataagaaa aaattacatc aaacagtcta cacagaagct
     1261 atgatcaaat ttcaagatga tttttataca aaggtatcta ataaatttgg attgagcaga
     1321 acgggcgagg agccgcgaga acgctataaa tcccgccctg attacttgag atttaaaaaa
     1381 agacaagaaa cagcattaaa tatattgtct gatatagaag aatttgaagc tgatattaaa
     1441 gaaaaagcaa ggaaaactgg atatagtaaa ggtgcaaaac aatttcaaaa taaaacatgg
     1501 gtaattaaag ttggtgaggc aattaaatta cttggaaaag agcataaagc agaattagat
     1561 caaaaagaaa aagacttaga aaaaataaaa aaagaaaaaa cagaaattga aactgagctt
     1621 aatttgaaaa aagaagaatt atctaatgca tatagtcaaa gaaatgaagc atcgagaaaa
     1681 aacagcgttt atattgataa agtaaacgct ctaaaaaaag aaaataaatt attacttcca
     1741 tacaaagatc aatttgattt gaaattacag caggaaaaag agccattaca agcagaagtc
     1801 aaagagttga cttctgaaaa taccaatttg aaaaatgaga attcagaact gaaaaaagaa
     1861 aatttagatt tcaaagaatt tattttgggt gttaaaaatt actatggatc taaatttcag
     1921 gaatggtacg aggaagtatt caacccaaaa acaaaaacaa aacccaaatt ttaattgaat
     1981 attttcatat ttgccgccta tgtggtgtat gagacaccac cagaagcggc ctgacagcgt
     2041 ttagctgtca tagctgggat ttatcccaaa aaaagtagtt tgcacgcagt tagtaacctt
     2101 taaatatcaa taacttataa agaaaaaata cttaaaccgt gaaccgtgaa aactgcagaa
     2161 cctctggttc tgtggtttga gcggttgtcc aacgacccga aggggaggcg gtaaggcagt
     2221 tgaagttacg gtttcttctt tcttattttc ttacttctta agcacccttt aaagccttat
     2281 atatcaacac tttaccaaaa aaaaaattat gaaaatcata attttcgatt atgaaaatca
     2341 taatgcaaaa ttatgaaaat cataatcaga cttatgaaaa tcataatttt gcatacaggt
     2401 gcattgatat gatttgatgt tgaaacgata actttcttat cgttttgata ttgacattgc
     2461 atttagatcg gttataaatg caacatagat tattattttt actacaaaaa ggaatataaa
     2521 aatggcaaaa gcaaaagttt taatagacga tacagaagaa gcaataataa aaaatgcatt
     2581 agatgttgat gatatgaatg aagtaaacat taacgtcacg agaaagaaga aaactgggtt
     2641 tttaggaact tattcaatag tttttcatga ctct
//
