LOCUS       NZ_OW970498             4715 bp    DNA     circular CON 20-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P6, complete sequence.
ACCESSION   NZ_OW970498
VERSION     NZ_OW970498.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082332
            Assembly: GCF_903993145.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993145.2-RS_2024_06_20
            Annotation Date                   :: 06/20/2024 03:56:42
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,547
            CDSs (total)                      :: 5,426
            Genes (coding)                    :: 5,289
            CDSs (with protein)               :: 5,289
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 49 of 137
            Pseudo Genes (incomplete)         :: 87 of 137
            Pseudo Genes (internal stop)      :: 17 of 137
            Pseudo Genes (multiple problems)  :: 14 of 137
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970498.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P6"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(join(4487..4715,1..728))
                     /locus_tag="LQV37_RS27560"
     CDS             complement(join(4487..4715,1..728))
                     /locus_tag="LQV37_RS27560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            1804..1998
                     /locus_tag="LQV37_RS27565"
                     /old_locus_tag="AI2996V1_5233"
     CDS             1804..1998
                     /locus_tag="LQV37_RS27565"
                     /old_locus_tag="AI2996V1_5233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            2652..2765
                     /locus_tag="LQV37_RS27770"
     CDS             2652..2765
                     /locus_tag="LQV37_RS27770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(2987..3655)
                     /locus_tag="LQV37_RS27570"
                     /old_locus_tag="AI2996V1_5234"
     CDS             complement(2987..3655)
                     /locus_tag="LQV37_RS27570"
                     /old_locus_tag="AI2996V1_5234"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(3637..4503)
                     /locus_tag="LQV37_RS27575"
                     /old_locus_tag="AI2996V1_5235"
     CDS             complement(3637..4503)
                     /locus_tag="LQV37_RS27575"
                     /old_locus_tag="AI2996V1_5235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     Typing          complement(1290..1545)
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(1670..1768)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          complement(2072..2156)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          2167..2724
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.831"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 tcctttataa tcagaggtgc atatttttta ccgtgctcaa taaatgattc caatacatgc
       61 tcctcaccac cacagtaatc aggccgcctg gtcatatcca taaaggtctt accgatagat
      121 gataccctga caggggaatt acgagccttc attggctcaa cataatttgt ttcttgtgta
      181 acgataattt ttattccatt gacctcagaa tttcttggaa atctaggcat gaattgtttg
      241 gcttcgtcta tatcaggatt atccttttga aaatcatgat agaacttatt cttccactgt
      301 tcggaacgac atgtcgtaaa gtggattatc ttgggtattt tatctgtgat gttatgccaa
      361 tccatagcgg ataaatagga taagtatcca tatggatacg tagagcacac tatatcattt
      421 tccggagaac catcgttacc tttaacaaaa aagacctcat agaaaccgcc aattaaatgg
      481 gggtaagcat gatgcttatc gttactttca actcttgata aaacccctga ctttaataat
      541 tttaatatat ttttttcaaa ttcattaggt cctgctttgt tctttctaat ttgatatatc
      601 ctctcaccat tatattcttt ttttaaataa aaaaggtaaa tctgcaaaga gatttcttct
      661 ttggttatga ctggtttttt atattcattc aacaaccaag acgttagcgc ttcttcgata
      721 agatacatat tcaacctttt cggtttagtc tctaatagaa tatacgtcct aaggacgtat
      781 attctattag agattgattg tcaagaaaaa aataataaca aacaagcatt tgccattttt
      841 atatttttga tatcctataa aataaatcct aaggatttat tttataggat aataagtagg
      901 aagtcaagaa aaagtttact tatatcaccg ttttcataac acctcatgcg atcaattcag
      961 cgccggttat agttcaaatc catgattagg acatctgttg ctcataaacg atgagcgtaa
     1021 aagatcattt ttcagcgtca tttaccataa cgtcgcatta cgcgcaccgc taaaacgcgc
     1081 tgaacgcgat tctgccgcga acaccgcaaa aagagatgtt ctccccgggg taaaccggaa
     1141 aaatgcgtca ggatcgcttt cagctcactg catagctatg catgaaagtg aatgacgatc
     1201 ggtttgggcg catacagtgc ccatgagaca cattttcgga cattttcagt tcgtgaatcc
     1261 ctgactcatt gctacatatc tgaacagaca cccctagcag cgcccccagg ggcgtcctgt
     1321 aaaaaaacac accgcgccgc tagcagcccc cctaatataa aatgatgttt tttatgaaaa
     1381 tagtcagtac cacccctaaa aagcggtgtt ggcgcagcta caacaccgcg ccgacaccgc
     1441 ttttttaaat atcacaaaga gagcaagaag aactaatttg tcataactct ctatttataa
     1501 agaaaaatca gcaaaaaatt gtttttgcgt ggggtgtggg catttcaggc atgagaacag
     1561 actcgcgttt ttccggagta tcagcggaat tattgattaa gaaacactcg acgcagagcg
     1621 aaattttatg caacagcggc tgcactgcac agggattatt tatcagttga tatgctgtgc
     1681 catgatacgt cctaaaaaaa caggacagga tgtgcaattg taataccgtc gcccgcaacg
     1741 tcttacaatt accacctggt cagggtccac ccgacacccg gtactgacgg agaacaacgg
     1801 aaggtgaaca aacagcaaca aactgcgctg aatatggcgc gatttatcaa aagccagagc
     1861 ctgacactgc ttgaaaaact ggatgctctg gatgccgacg aacaggcggc catgtgcgaa
     1921 cgactgcacg aactcgcgga agaactccag aacagcatcc aggttcgctt tgagaccgaa
     1981 agtgaaacag gaacataacg aagctgacgg aggcgctcac ggcttgtccg cgagcgtttt
     2041 cggcagcaga caagcccgcc agggcgcgtc agcgggtgtc ggggcgaagc cctgacccag
     2101 tcacgtagcg atagcggagt gtatactggc ttaactatgc ggcatcagtg cgaattgtat
     2161 gaaaagtgcc ccatgccggg tgtgaaattc cgcacagatg cgtaaggaga aaatgcgcgt
     2221 ccaggcgctt ttccgcttcc tcgctcactg actcgctacg ctcggtcgtt cggctgcggc
     2281 gagcggtact gacttacaca aaaacggcag cacggttatc cacagaatca ggggataagg
     2341 ccggaaagaa catgtgagca aaagaccaag aacaggaaga aggccgcgcc gcaggcgttt
     2401 ttccataggc tccgcccccc tgacgagcat cacagaaatc gacgctcaag tcagaggtgg
     2461 cgaaacccga caggacttaa agataccaga cgtttccccc tggtggctcc ctcgtgcgct
     2521 ctcctgttcc gaccctgccg cttaccggat acctgtccgc ctttctccct tcgggaagcg
     2581 tggcgctttc tcatagctca cgctgttggt atctcagttc ggtgtaggtc gttcgctcca
     2641 agctgggctg tgtgcacgaa ccccccgttc agcccgactg ctgcgcctta tccggtaact
     2701 atcgtcttga gtccaacccg gtaagacacg ccttaacgcc actggcagca gccactggta
     2761 actgatttag aggagttagt cttgaagtca tgcgccagtt aaggctaaac tgaaagaaca
     2821 ggttttggtg actgcgctcc tccaagccag ttaccttggt tcttcgagcc gcaaactctt
     2881 tgaacctaag agaaaaccgc cccgcaaagg cggttttttt cttttacaga aaagagatta
     2941 tctatatgac acgaagatct caatagcttc ttcaaaaaac acgaaatcaa gaagggaatc
     3001 taacgtagca aaccgtatga ttctctgcgt tacccgggat atttttagta aatttagcca
     3061 agttagattc tgggttatct ttcatgaggt caataacagt accatcatta aaatgctccc
     3121 aaaacccatc agtacataaa ataacctctt tgttttcatc atttaaatca aaaactgaat
     3181 gattgaaaat tatctcatca gagcagaaat caacaaatga tgttagataa tttctgtctg
     3241 ggcaataaca aacgaggtga ggtatttttt tattatcgat tccattttcc tttaatcttt
     3301 tccaggcaac cgagttatcc tctgttagaa ggactccact tttgttatat acacggcaat
     3361 ctcctgcgtt atatatatgg aggtgcgtat tatttttaaa aaggaaacat actgcagcct
     3421 taacaggaac tgacttgcat ggttcaataa tatctttatt cagatcacca gaaaacacgc
     3481 acttatctaa cctaccagag agaattttca tattccactc agagcaggaa tacccatcca
     3541 taataaccat tccaaacaca tcattttgac aatttatcgt agataataag tctaagtttt
     3601 cacatctgtt accaatatca ctaaaactga acgctatcat ttgaatatat cccacggaag
     3661 actttcatag aaacaggcaa ctttttcata agcatcttca aaaagaggta atgatttaac
     3721 ggtggatgat aaatcctgat atcgctgact ggaacgctcg ataatttcta catcccttat
     3781 acctttaacg tttaagagat tatccaattg tttaccttca ctctttttta aaagagactc
     3841 cagtatttta tacttatctt gccgagaaaa ctcatattta cctaaaagat aattgatatc
     3901 atatatatct tgctctcgat ttctctctct aactttttgt tgcaaaacgg atcgatattt
     3961 ttcagccatc aaatcagtta agctgtaggt ctttacgcta tcattgtcat catcaccatc
     4021 taatgataaa aagtcaaaat catacgtttt ttcgttaaag ctaaaatcga tatttatcac
     4081 tgaaggtgat tgattagatt caagcctttt cattgcagac gcattagaac gatcgcaaaa
     4141 ggctatattt atctgtacag ttggaaatgt tccttgtgca ttaggttgaa ttttatgaga
     4201 ttgaacttta catttaatac catatcccaa ttcagcctca gcaacatcca ttgagtcatt
     4261 aaacctattg aaaaaatccc ccaagtcaat ttcagaaagt tttttttcgg tagaaaaatc
     4321 aatatccttt gtgtatctat cactaccatg cttaacacca agaagagtcc ctcccttcat
     4381 aaccatcatt tcattcaaac tctcctctat agaaatagat ttaagtatta tatgtacagc
     4441 ctggcgcatc aacctgtact tcccaccaga ctcttcgatc caattattaa tttctttttc
     4501 cataagactt aaccatatca acattaatag aaataaacca ttcttcatca aagtaaggtg
     4561 agaatggact ctttggagat agcactttcg aactacctct gtatttaccc gcctcttgtt
     4621 tccattcgct tattttttta ttattaaccc caataattct atccaaaatg aatccaaccc
     4681 ttaccttgtc aatatgacgg ccaagcttat cgact
//
