LOCUS       NZ_OW970485             2674 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P7, complete sequence.
ACCESSION   NZ_OW970485
VERSION     NZ_OW970485.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082323
            Assembly: GCF_903993085.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993085.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:19:34
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,525
            CDSs (total)                      :: 5,403
            Genes (coding)                    :: 5,268
            CDSs (with protein)               :: 5,268
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 50 of 135
            Pseudo Genes (incomplete)         :: 83 of 135
            Pseudo Genes (internal stop)      :: 18 of 135
            Pseudo Genes (multiple problems)  :: 14 of 135
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970485.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P7"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(401..1684)
                     /locus_tag="LQV36_RS27500"
                     /old_locus_tag="AI2764V1_5225"
     CDS             complement(401..1684)
                     /locus_tag="LQV36_RS27500"
                     /old_locus_tag="AI2764V1_5225"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="WP_163495232.1"
                     /translation="MKSQFMHVELYSREEPAKKTINKSKNLNHQSDVRTTTVSGVLSEM
                     KREEGFTSHLESIHAPDVLYGSISDLERSIERYEAEFKTTDKNGKEKKLRKDACILLAG
                     VVSLDRADEEIWEEYKKSSIEYLKNKYGENLKCVVEHTDETNPHFHFYVVGNQKQDLNL
                     LHDGKLAVSKLAKEDKKKLHQTVYTEAMIKFQDDFYTKVSNKFGLSRTGEEPRERYKSR
                     PDYLRFKKRQETALNILSDIEEFEADIKEKARKTGYSKGAKQFQNKTWVIKVGEAIKLL
                     GKEHKAELDQKEKDLEKIKKEKTEIETELNLKKEELSNAYSQRNEASRKNSVYIDKVNA
                     LKKENKLLLPYKDQFDLKLQQEKEPLQAEVKELTSENTNLKNENSELKKENLDFKEFIL
                     GVKNYYGSKFQEWYEEVFNPKTKTKPKF"
                     /name="plasmid recombination protein"
     gene            complement(1928..2527)
                     /locus_tag="LQV36_RS27505"
                     /old_locus_tag="AI2764V1_5226"
     CDS             complement(1928..2527)
                     /locus_tag="LQV36_RS27505"
                     /old_locus_tag="AI2764V1_5226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_094327210.1"
                     /translation="MAKAKVLIDDTEEAIIKNALDVDDMNEVNINVTRKKKTGFLGTYS
                     IVFHDSVKTLSKMNLKPNAYKIVMYLFGIIEMGNILVNFSQKKIADDLGLQPSNVSRAF
                     KELFEKKVLIKDSEDGHVYLNSNLCTMGVPKNFDQKRMKSLQKSNIETEDFKNQINLFT
                     PTNTTKIKTNDKKVIKKKEKENVLEFPMQNDWVDIE"
                     /name="helix-turn-helix domain-containing protein"
ORIGIN
        1 taagtctgat tatgattttc ataattttgc attatgattt tcataatcga aaattatgat
       61 tttcataatt ttttttttgg taaagtgttg atatataagg ctttaaaggg tgcttaagaa
      121 gtaagaaaat aagaaagaag aaaccgtaac ttcaactgcc ttaccgcctc cccttcgggt
      181 cgttggacaa ccgctcaaac cacagaacca gaggttctgc agttttcacg gttcacggtt
      241 taagtatttt ttctttataa gttattgata tttaaaggtt actaactgcg tgcaaactac
      301 tttttttggg ataaatccca gctatgacag ctaaacgctg tcaggccgct tctggtggtg
      361 tctcatacac cacataggcg gcaaatatga aaatattcaa ttaaaatttg ggttttgttt
      421 ttgtttttgg gttgaatact tcctcgtacc attcctgaaa tttagatcca tagtaatttt
      481 taacacccaa aataaattct ttgaaatcta aattttcttt tttcagttct gaattctcat
      541 ttttcaaatt ggtattttca gaagtcaact ctttgacttc tgcttgtaat ggctcttttt
      601 cctgctgtaa tttcaaatca aattgatctt tgtatggaag taataattta ttttcttttt
      661 ttagagcgtt tactttatca atataaacgc tgttttttct cgatgcttca tttctttgac
      721 tatatgcatt agataattct tcttttttca aattaagctc agtttcaatt tctgtttttt
      781 ctttttttat tttttctaag tctttttctt tttgatctaa ttctgcttta tgctcttttc
      841 caagtaattt aattgcctca ccaactttaa ttacccatgt tttattttga aattgttttg
      901 cacctttact atatccagtt ttccttgctt tttctttaat atcagcttca aattcttcta
      961 tatcagacaa tatatttaat gctgtttctt gtcttttttt aaatctcaag taatcagggc
     1021 gggatttata gcgttctcgc ggctcctcgc ccgttctgct caatccaaat ttattagata
     1081 cctttgtata aaaatcatct tgaaatttga tcatagcttc tgtgtagact gtttgatgta
     1141 attttttctt atcttctttt gctaatttag atactgcgag ctttccatca tgaagcaaat
     1201 ttaaatcttg tttttgatta ccgaccacat aaaagtgaaa atgtgggttt gtttcgtctg
     1261 tatgctcaac aacacatttt aaattttcac catatttatt tttcaaatat tcaatagatg
     1321 atttcttgta ttcttcccaa atttcttcat ctgctcgatc tagagaaacc acaccagcaa
     1381 gcaagatgca tgcatctttg cgtagcttct tctctttgcc gtttttatca gtagtcttaa
     1441 attcagcctc gtaacgctct atagagcgtt ctagatcgct tatagagcca tacagcacat
     1501 caggtgcatg tatgctctct aaatgtgatg taaaaccttc ttcccttttc atttctgaca
     1561 acacaccgga aacggttgtt gttctaacat cagattgatg atttagattt ttacttttat
     1621 ttattgtctt ttttgctggt tcttctctgc tgtagagttc tacatgcata aattgtgatt
     1681 tcattttcaa ttctcctata ttttaatttc ccttatatat gtaattaaca gttattgttt
     1741 ttctgtcaat agctatagga accgactata tctattacgc tagcatattt catatgctgc
     1801 tccatagatg cggccctacg gggttaaagt caacttcaaa acaaaaaagc aaatccctaa
     1861 accttgcaaa ttttatattt gcgaggttta gggattcagc aaacgaagtg cggtagtatt
     1921 agttttacta ttcaatatca acccaatcat tttgcattgg aaactctaaa acgttttctt
     1981 tttccttttt cttgataact ttcttatcat tggtttttat ttttgttgta tttgtaggag
     2041 taaataaatt gatctgattt ttaaaatctt cagtttcaat atttgatttt tgtaaacttt
     2101 tcattctctt ttgatcaaaa tttttcggaa cacccatagt gcatagattt gaattcaagt
     2161 aaacgtgtcc gtcttcgcta tctttgatta aaactttttt ttcaaaaagt tctttgaaag
     2221 ctcttgatac gtttgaaggc tgcaaaccta aatcatcagc aatctttttc tgtgagaagt
     2281 taactaaaat attacccatc tctattatgc caaataagta cattacaatc ttatatgcat
     2341 taggctttaa gttcatttta gatagtgttt tcacagagtc atgaaaaact attgaataag
     2401 ttcctaaaaa cccagttttc ttctttctcg tgacgttaat gtttacttca ttcatatcat
     2461 caacatctaa tgcatttttt attattgctt cttctgtatc gtctattaaa acttttgctt
     2521 ttgccatttt tatattcctt tttgtagtaa aaataataat ctatgttgca tttataaccg
     2581 atctaaatgc aatgtcaata tcaaaacgat aagaaagtta tcgtttcaac atcaaatcat
     2641 atcaatgcac ctgtatgcaa aattatgatt ttca
//
