LOCUS       NZ_OW970483             4715 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P5, complete sequence.
ACCESSION   NZ_OW970483
VERSION     NZ_OW970483.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082323
            Assembly: GCF_903993085.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993085.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:19:34
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,525
            CDSs (total)                      :: 5,403
            Genes (coding)                    :: 5,268
            CDSs (with protein)               :: 5,268
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 135
            CDSs (without protein)            :: 135
            Pseudo Genes (ambiguous residues) :: 0 of 135
            Pseudo Genes (frameshifted)       :: 50 of 135
            Pseudo Genes (incomplete)         :: 83 of 135
            Pseudo Genes (internal stop)      :: 18 of 135
            Pseudo Genes (multiple problems)  :: 14 of 135
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970483.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P5"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            join(4670..4715,1..623)
                     /locus_tag="LQV36_RS27450"
                     /old_locus_tag="AI2764V1_5218"
     CDS             join(4670..4715,1..623)
                     /locus_tag="LQV36_RS27450"
                     /old_locus_tag="AI2764V1_5218"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(845..958)
                     /locus_tag="LQV36_RS27665"
     CDS             complement(845..958)
                     /locus_tag="LQV36_RS27665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(1612..1806)
                     /locus_tag="LQV36_RS27455"
                     /old_locus_tag="AI2764V1_5219"
     CDS             complement(1612..1806)
                     /locus_tag="LQV36_RS27455"
                     /old_locus_tag="AI2764V1_5219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            2882..3838
                     /locus_tag="LQV36_RS27460"
                     /old_locus_tag="AI2764V1_5220"
     CDS             2882..3838
                     /locus_tag="LQV36_RS27460"
                     /old_locus_tag="AI2764V1_5220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            3822..4688
                     /locus_tag="LQV36_RS27465"
                     /old_locus_tag="AI2764V1_5221"
     CDS             3822..4688
                     /locus_tag="LQV36_RS27465"
                     /old_locus_tag="AI2764V1_5221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     Typing          1455..1539
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          1843..1941
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          2066..2321
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(887..1444)
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.821"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 acagatgtga aaacttagac ttattatcta cgataaattg tcaaaatgat gtgtttggaa
       61 tggttattat ggatgggtat tcctgctctg agtggaatat gaaaattctc tctggtaggt
      121 tagataagtg cgtgttttct ggtgatctga ataaagatat tattgaacca tgcaagtcag
      181 ttcctgttaa ggctgcagta tgtttccttt ttaaaaataa tacgcacctc catatatata
      241 acgcaggaga ttgccgtgta tataacaaaa gtggagtcct tctaacagag gataactcgg
      301 ttgcctggaa aagattaaag gaaaatggaa tcgataataa aaaaatacct cacctcgttt
      361 gttattgccc agacagaaat tatctaacat catttgttga tttctgctct gatgagataa
      421 ttttcaatca ttcagttttt gatttaaatg atgaaaacaa agaggttatt ttatgtactg
      481 atgggttttg ggagcatttt aatgatggta ctgttattga cctcatgaaa gataacccag
      541 aatctaactt ggctaaattt actaaaaata tcccgggtaa cgcagagaat catacggttt
      601 gctacgttag attcccttct tgatttcgtg ttttttgaag aagctattga gatcttcgtg
      661 tcatatagat aatctctttt ctgtaaaaga aaaaaaccgc ctttgcgggg cggttttctc
      721 ttaggttcaa agagtttgcg gctcgaagaa ccaaggtaac tggcttggag gagcgcagtc
      781 accaaaacct gttctttcag tttagcctta actggcgcat gacttcaaga ctaactcctc
      841 taaatcagtt accagtggct gctgccagtg gcgttaaggc gtgtcttacc gggttggact
      901 caagacgata gttaccggat aaggcgcagc agtcgggctg aacggggggt tcgtgcacac
      961 agcccagctt ggagcgaacg acctacaccg aactgagata ccaacagcgt gagctatgag
     1021 aaagcgccac gcttcccgaa gggagaaagg cggacaggta tccggtaagc ggcagggtcg
     1081 gaacaggaga gcgcacgagg gagccaccag ggggaaacgt ctggtatctt taagtcctgt
     1141 cgggtttcgc cacctctgac ttgagcgtcg atttctgtga tgctcgtcag gggggcggag
     1201 cctatggaaa aacgcctgcg gcgcggcctt cttcctgttc ttggtctttt gctcacatgt
     1261 tctttccggc cttatcccct gattctgtgg ataaccgtgc tgccgttttt gtgtaagtca
     1321 gtaccgctcg ccgcagccga acgaccgagc gtagcgagtc agtgagcgag gaagcggaaa
     1381 agcgcctgga cgcgcatttt ctccttacgc atctgtgcgg aatttcacac ccggcatggg
     1441 gcacttttca tacaattcgc actgatgccg catagttaag ccagtataca ctccgctatc
     1501 gctacgtgac tgggtcaggg cttcgccccg acacccgctg acgcgccctg gcgggcttgt
     1561 ctgctgccga aaacgctcgc ggacaagccg tgagcgcctc cgtcagcttc gttatgttcc
     1621 tgtttcactt tcggtctcaa agcgaacctg gatgctgttc tggagttctt ccgcgagttc
     1681 gtgcagtcgt tcgcacatgg ccgcctgttc gtcggcatcc agagcatcca gtttttcaag
     1741 cagtgtcagg ctctggcttt tgataaatcg cgccatattc agcgcagttt gttgctgttt
     1801 gttcaccttc cgttgttctc cgtcagtacc gggtgtcggg tggaccctga ccaggtggta
     1861 attgtaagac gttgcgggcg acggtattac aattgcacat cctgtcctgt ttttttagga
     1921 cgtatcatgg cacagcatat caactgataa ataatccctg tgcagtgcag ccgctgttgc
     1981 ataaaatttc gctctgcgtc gagtgtttct taatcaataa ttccgctgat actccggaaa
     2041 aacgcgagtc tgttctcatg cctgaaatgc ccacacccca cgcaaaaaca attttttgct
     2101 gatttttctt tataaataga gagttatgac aaattagttc ttcttgctct ctttgtgata
     2161 tttaaaaaag cggtgtcggc gcggtgttgt agctgcgcca acaccgcttt ttaggggtgg
     2221 tactgactat tttcataaaa aacatcattt tatattaggg gggctgctag cggcgcggtg
     2281 tgttttttta caggacgccc ctgggggcgc tgctaggggt gtctgttcag atatgtagca
     2341 atgagtcagg gattcacgaa ctgaaaatgt ccgaaaatgt gtctcatggg cactgtatgc
     2401 gcccaaaccg atcgtcattc actttcatgc atagctatgc agtgagctga aagcgatcct
     2461 gacgcatttt tccggtttac cccggggaga acatctcttt ttgcggtgtt cgcggcagaa
     2521 tcgcgttcag cgcgttttag cggtgcgcgt aatgcgacgt tatggtaaat gacgctgaaa
     2581 aatgatcttt tacgctcatc gtttatgagc aacagatgtc ctaatcatgg atttgaacta
     2641 taaccggcgc tgaattgatc gcatgaggtg ttatgaaaac ggtgatataa gtaaactttt
     2701 tcttgacttc ctacttatta tcatataaaa taaatcctta ggatttattt tataggatat
     2761 caaaaatata aaaatggcaa atgcttgttt gttattattt ttttcttgac aatcaatctc
     2821 taatagaata tacgtcctta ggacgtatat tctattagag actaaaccga aaaggttgaa
     2881 tatgtatctt atcgaagaag cgctaacgtc ttggttgttg aatgaatata aaaaaccagt
     2941 cataaccaaa gaagaaatct ctttgcagat ttaccttttt tatttaaaaa aagaatataa
     3001 tggtgagagg atatatcaaa ttagaaagaa caaagcagga cctaatgaat ttgaaaaaaa
     3061 tatattaaaa ttattaaagt caggggtttt atcaagagtt gaaagtaacg ataagcatca
     3121 tgcttacccc catttaattg gcggtttcta tgaggtcttt tttgttaaag gtaacgatgg
     3181 ttctccggaa aatgatatag tgtgctctac gtatccatat ggatacttat cctatttatc
     3241 cgctatggat tggcataaca tcacagataa aatacccaag ataatccact ttacgacatg
     3301 tcgttccgaa cagtggaaga ataagttcta tcatgatttt caaaaggata atcctgatat
     3361 agacgaagcc aaacaattca tgcctagatt tccaagaaat tctgaggtca atggaataaa
     3421 aattatcgtt acacaagaaa caaattatgt tgagccaatg aaggctcgta attcccctgt
     3481 cagggtatca tctatcggta agacctttat ggatatgacc aggcggcctg attactgtgg
     3541 tggtgaggag catgtattgg aatcatttat tgagcacggt aaaaaatatg cacctctgat
     3601 tataaaggaa gtcgataagc ttggccgtca tattgacaag gtaagggttg gattcatttt
     3661 ggatagaatt attggggtta ataataaaaa aataagcgaa tggaaacaag aggcgggtaa
     3721 atacagaggt agttcgaaag tgctatctcc aaagagtcca ttctcacctt actttgatga
     3781 agaatggttt atttctatta atgttgatat ggttaagtct tatggaaaaa gaaattaata
     3841 attggatcga agagtctggt gggaagtaca ggttgatgcg ccaggctgta catataatac
     3901 ttaaatctat ttctatagag gagagtttga atgaaatgat ggttatgaag ggagggactc
     3961 ttcttggtgt taagcatggt agtgatagat acacaaagga tattgatttt tctaccgaaa
     4021 aaaaactttc tgaaattgac ttgggggatt ttttcaatag gtttaatgac tcaatggatg
     4081 ttgctgaggc tgaattggga tatggtatta aatgtaaagt tcaatctcat aaaattcaac
     4141 ctaatgcaca aggaacattt ccaactgtac agataaatat agccttttgc gatcgttcta
     4201 atgcgtctgc aatgaaaagg cttgaatcta atcaatcacc ttcagtgata aatatcgatt
     4261 ttagctttaa cgaaaaaacg tatgattttg actttttatc attagatggt gatgatgaca
     4321 atgatagcgt aaagacctac agcttaactg atttgatggc tgaaaaatat cgatccgttt
     4381 tgcaacaaaa agttagagag agaaatcgag agcaagatat atatgatatc aattatcttt
     4441 taggtaaata tgagttttct cggcaagata agtataaaat actggagtct cttttaaaaa
     4501 agagtgaagg taaacaattg gataatctct taaacgttaa aggtataagg gatgtagaaa
     4561 ttatcgagcg ttccagtcag cgatatcagg atttatcatc caccgttaaa tcattacctc
     4621 tttttgaaga tgcttatgaa aaagttgcct gtttctatga aagtcttccg tgggatatat
     4681 tcaaatgata gcgttcagtt ttagtgatat tggta
//
