LOCUS       NZ_OW970458             4715 bp    DNA     circular CON 20-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P6, complete sequence.
ACCESSION   NZ_OW970458
VERSION     NZ_OW970458.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082326
            Assembly: GCF_903993035.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993035.2-RS_2024_06_20
            Annotation Date                   :: 06/20/2024 03:55:10
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,541
            CDSs (total)                      :: 5,421
            Genes (coding)                    :: 5,291
            CDSs (with protein)               :: 5,291
            Genes (RNA)                       :: 120
            rRNAs                             :: 8, 8, 7 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 7 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 130
            CDSs (without protein)            :: 130
            Pseudo Genes (ambiguous residues) :: 0 of 130
            Pseudo Genes (frameshifted)       :: 49 of 130
            Pseudo Genes (incomplete)         :: 80 of 130
            Pseudo Genes (internal stop)      :: 17 of 130
            Pseudo Genes (multiple problems)  :: 14 of 130
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970458.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P6"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(join(4476..4715,1..717))
                     /locus_tag="LQV13_RS27540"
     CDS             complement(join(4476..4715,1..717))
                     /locus_tag="LQV13_RS27540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            1793..1987
                     /locus_tag="LQV13_RS27545"
                     /old_locus_tag="AI2767V1_5239"
     CDS             1793..1987
                     /locus_tag="LQV13_RS27545"
                     /old_locus_tag="AI2767V1_5239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            2641..2754
                     /locus_tag="LQV13_RS27750"
     CDS             2641..2754
                     /locus_tag="LQV13_RS27750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(2976..3644)
                     /locus_tag="LQV13_RS27550"
                     /old_locus_tag="AI2767V1_5240"
     CDS             complement(2976..3644)
                     /locus_tag="LQV13_RS27550"
                     /old_locus_tag="AI2767V1_5240"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(3626..4492)
                     /locus_tag="LQV13_RS27555"
                     /old_locus_tag="AI2767V1_5241"
     CDS             complement(3626..4492)
                     /locus_tag="LQV13_RS27555"
                     /old_locus_tag="AI2767V1_5241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     Typing          complement(1279..1534)
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(1659..1757)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          complement(2061..2145)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          2156..2713
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.831"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 cagaggtgca tattttttac cgtgctcaat aaatgattcc aatacatgct cctcaccacc
       61 acagtaatca ggccgcctgg tcatatccat aaaggtctta ccgatagatg ataccctgac
      121 aggggaatta cgagccttca ttggctcaac ataatttgtt tcttgtgtaa cgataatttt
      181 tattccattg acctcagaat ttcttggaaa tctaggcatg aattgtttgg cttcgtctat
      241 atcaggatta tccttttgaa aatcatgata gaacttattc ttccactgtt cggaacgaca
      301 tgtcgtaaag tggattatct tgggtatttt atctgtgatg ttatgccaat ccatagcgga
      361 taaataggat aagtatccat atggatacgt agagcacact atatcatttt ccggagaacc
      421 atcgttacct ttaacaaaaa agacctcata gaaaccgcca attaaatggg ggtaagcatg
      481 atgcttatcg ttactttcaa ctcttgataa aacccctgac tttaataatt ttaatatatt
      541 tttttcaaat tcattaggtc ctgctttgtt ctttctaatt tgatatatcc tctcaccatt
      601 atattctttt tttaaataaa aaaggtaaat ctgcaaagag atttcttctt tggttatgac
      661 tggtttttta tattcattca acaaccaaga cgttagcgct tcttcgataa gatacatatt
      721 caaccttttc ggtttagtct ctaatagaat atacgtccta aggacgtata ttctattaga
      781 gattgattgt caagaaaaaa ataataacaa acaagcattt gccattttta tatttttgat
      841 atcctataaa ataaatccta aggatttatt ttataggata ataagtagga agtcaagaaa
      901 aagtttactt atatcaccgt tttcataaca cctcatgcga tcaattcagc gccggttata
      961 gttcaaatcc atgattagga catctgttgc tcataaacga tgagcgtaaa agatcatttt
     1021 tcagcgtcat ttaccataac gtcgcattac gcgcaccgct aaaacgcgct gaacgcgatt
     1081 ctgccgcgaa caccgcaaaa agagatgttc tccccggggt aaaccggaaa aatgcgtcag
     1141 gatcgctttc agctcactgc atagctatgc atgaaagtga atgacgatcg gtttgggcgc
     1201 atacagtgcc catgagacac attttcggac attttcagtt cgtgaatccc tgactcattg
     1261 ctacatatct gaacagacac ccctagcagc gcccccaggg gcgtcctgta aaaaaacaca
     1321 ccgcgccgct agcagccccc ctaatataaa atgatgtttt ttatgaaaat agtcagtacc
     1381 acccctaaaa agcggtgttg gcgcagctac aacaccgcgc cgacaccgct tttttaaata
     1441 tcacaaagag agcaagaaga actaatttgt cataactctc tatttataaa gaaaaatcag
     1501 caaaaaattg tttttgcgtg gggtgtgggc atttcaggca tgagaacaga ctcgcgtttt
     1561 tccggagtat cagcggaatt attgattaag aaacactcga cgcagagcga aattttatgc
     1621 aacagcggct gcactgcaca gggattattt atcagttgat atgctgtgcc atgatacgtc
     1681 ctaaaaaaac aggacaggat gtgcaattgt aataccgtcg cccgcaacgt cttacaatta
     1741 ccacctggtc agggtccacc cgacacccgg tactgacgga gaacaacgga aggtgaacaa
     1801 acagcaacaa actgcgctga atatggcgcg atttatcaaa agccagagcc tgacactgct
     1861 tgaaaaactg gatgctctgg atgccgacga acaggcggcc atgtgcgaac gactgcacga
     1921 actcgcggaa gaactccaga acagcatcca ggttcgcttt gagaccgaaa gtgaaacagg
     1981 aacataacga agctgacgga ggcgctcacg gcttgtccgc gagcgttttc ggcagcagac
     2041 aagcccgcca gggcgcgtca gcgggtgtcg gggcgaagcc ctgacccagt cacgtagcga
     2101 tagcggagtg tatactggct taactatgcg gcatcagtgc gaattgtatg aaaagtgccc
     2161 catgccgggt gtgaaattcc gcacagatgc gtaaggagaa aatgcgcgtc caggcgcttt
     2221 tccgcttcct cgctcactga ctcgctacgc tcggtcgttc ggctgcggcg agcggtactg
     2281 acttacacaa aaacggcagc acggttatcc acagaatcag gggataaggc cggaaagaac
     2341 atgtgagcaa aagaccaaga acaggaagaa ggccgcgccg caggcgtttt tccataggct
     2401 ccgcccccct gacgagcatc acagaaatcg acgctcaagt cagaggtggc gaaacccgac
     2461 aggacttaaa gataccagac gtttccccct ggtggctccc tcgtgcgctc tcctgttccg
     2521 accctgccgc ttaccggata cctgtccgcc tttctccctt cgggaagcgt ggcgctttct
     2581 catagctcac gctgttggta tctcagttcg gtgtaggtcg ttcgctccaa gctgggctgt
     2641 gtgcacgaac cccccgttca gcccgactgc tgcgccttat ccggtaacta tcgtcttgag
     2701 tccaacccgg taagacacgc cttaacgcca ctggcagcag ccactggtaa ctgatttaga
     2761 ggagttagtc ttgaagtcat gcgccagtta aggctaaact gaaagaacag gttttggtga
     2821 ctgcgctcct ccaagccagt taccttggtt cttcgagccg caaactcttt gaacctaaga
     2881 gaaaaccgcc ccgcaaaggc ggtttttttc ttttacagaa aagagattat ctatatgaca
     2941 cgaagatctc aatagcttct tcaaaaaaca cgaaatcaag aagggaatct aacgtagcaa
     3001 accgtatgat tctctgcgtt acccgggata tttttagtaa atttagccaa gttagattct
     3061 gggttatctt tcatgaggtc aataacagta ccatcattaa aatgctccca aaacccatca
     3121 gtacataaaa taacctcttt gttttcatca tttaaatcaa aaactgaatg attgaaaatt
     3181 atctcatcag agcagaaatc aacaaatgat gttagataat ttctgtctgg gcaataacaa
     3241 acgaggtgag gtattttttt attatcgatt ccattttcct ttaatctttt ccaggcaacc
     3301 gagttatcct ctgttagaag gactccactt ttgttatata cacggcaatc tcctgcgtta
     3361 tatatatgga ggtgcgtatt atttttaaaa aggaaacata ctgcagcctt aacaggaact
     3421 gacttgcatg gttcaataat atctttattc agatcaccag aaaacacgca cttatctaac
     3481 ctaccagaga gaattttcat attccactca gagcaggaat acccatccat aataaccatt
     3541 ccaaacacat cattttgaca atttatcgta gataataagt ctaagttttc acatctgtta
     3601 ccaatatcac taaaactgaa cgctatcatt tgaatatatc ccacggaaga ctttcataga
     3661 aacaggcaac tttttcataa gcatcttcaa aaagaggtaa tgatttaacg gtggatgata
     3721 aatcctgata tcgctgactg gaacgctcga taatttctac atcccttata cctttaacgt
     3781 ttaagagatt atccaattgt ttaccttcac tcttttttaa aagagactcc agtattttat
     3841 acttatcttg ccgagaaaac tcatatttac ctaaaagata attgatatca tatatatctt
     3901 gctctcgatt tctctctcta actttttgtt gcaaaacgga tcgatatttt tcagccatca
     3961 aatcagttaa gctgtaggtc tttacgctat cattgtcatc atcaccatct aatgataaaa
     4021 agtcaaaatc atacgttttt tcgttaaagc taaaatcgat atttatcact gaaggtgatt
     4081 gattagattc aagccttttc attgcagacg cattagaacg atcgcaaaag gctatattta
     4141 tctgtacagt tggaaatgtt ccttgtgcat taggttgaat tttatgagat tgaactttac
     4201 atttaatacc atatcccaat tcagcctcag caacatccat tgagtcatta aacctattga
     4261 aaaaatcccc caagtcaatt tcagaaagtt ttttttcggt agaaaaatca atatcctttg
     4321 tgtatctatc actaccatgc ttaacaccaa gaagagtccc tcccttcata accatcattt
     4381 cattcaaact ctcctctata gaaatagatt taagtattat atgtacagcc tggcgcatca
     4441 acctgtactt cccaccagac tcttcgatcc aattattaat ttctttttcc ataagactta
     4501 accatatcaa cattaataga aataaaccat tcttcatcaa agtaaggtga gaatggactc
     4561 tttggagata gcactttcga actacctctg tatttacccg cctcttgttt ccattcgctt
     4621 atttttttat tattaacccc aataattcta tccaaaatga atccaaccct taccttgtca
     4681 atatgacggc caagcttatc gacttccttt ataat
//
