LOCUS       NZ_OW970442             4715 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P6, complete sequence.
ACCESSION   NZ_OW970442
VERSION     NZ_OW970442.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082324
            Assembly: GCF_903993105.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993105.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:23:00
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,573
            CDSs (total)                      :: 5,451
            Genes (coding)                    :: 5,322
            CDSs (with protein)               :: 5,322
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 129
            CDSs (without protein)            :: 129
            Pseudo Genes (ambiguous residues) :: 0 of 129
            Pseudo Genes (frameshifted)       :: 49 of 129
            Pseudo Genes (incomplete)         :: 79 of 129
            Pseudo Genes (internal stop)      :: 17 of 129
            Pseudo Genes (multiple problems)  :: 14 of 129
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970442.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P6"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            928..1884
                     /locus_tag="LQV41_RS27690"
                     /old_locus_tag="AI2765V1_5261"
     CDS             928..1884
                     /locus_tag="LQV41_RS27690"
                     /old_locus_tag="AI2765V1_5261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            1868..2734
                     /locus_tag="LQV41_RS27695"
                     /old_locus_tag="AI2765V1_5262"
     CDS             1868..2734
                     /locus_tag="LQV41_RS27695"
                     /old_locus_tag="AI2765V1_5262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     gene            2716..3384
                     /locus_tag="LQV41_RS27700"
                     /old_locus_tag="AI2765V1_5263"
     CDS             2716..3384
                     /locus_tag="LQV41_RS27700"
                     /old_locus_tag="AI2765V1_5263"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(3606..3719)
                     /locus_tag="LQV41_RS27900"
     CDS             complement(3606..3719)
                     /locus_tag="LQV41_RS27900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(4373..4567)
                     /locus_tag="LQV41_RS27705"
                     /old_locus_tag="AI2765V1_5264"
     CDS             complement(4373..4567)
                     /locus_tag="LQV41_RS27705"
                     /old_locus_tag="AI2765V1_5264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     Typing          112..367
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          4216..4300
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          4604..4702
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          complement(3648..4205)
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.821"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 tccctgtgca gtgcagccgc tgttgcataa aatttcgctc tgcgtcgagt gtttcttaat
       61 caataattcc gctgatactc cggaaaaacg cgagtctgtt ctcatgcctg aaatgcccac
      121 accccacgca aaaacaattt tttgctgatt tttctttata aatagagagt tatgacaaat
      181 tagttcttct tgctctcttt gtgatattta aaaaagcggt gtcggcgcgg tgttgtagct
      241 gcgccaacac cgctttttag gggtggtact gactattttc ataaaaaaca tcattttata
      301 ttaggggggc tgctagcggc gcggtgtgtt tttttacagg acgcccctgg gggcgctgct
      361 aggggtgtct gttcagatat gtagcaatga gtcagggatt cacgaactga aaatgtccga
      421 aaatgtgtct catgggcact gtatgcgccc aaaccgatcg tcattcactt tcatgcatag
      481 ctatgcagtg agctgaaagc gatcctgacg catttttccg gtttaccccg gggagaacat
      541 ctctttttgc ggtgttcgcg gcagaatcgc gttcagcgcg ttttagcggt gcgcgtaatg
      601 cgacgttatg gtaaatgacg ctgaaaaatg atcttttacg ctcatcgttt atgagcaaca
      661 gatgtcctaa tcatggattt gaactataac cggcgctgaa ttgatcgcat gaggtgttat
      721 gaaaacggtg atataagtaa actttttctt gacttcctac ttattatcct ataaaataaa
      781 tccttaggat ttattttata ggatatcaaa aatataaaaa tggcaaatgc ttgtttgtta
      841 ttattttttt cttgacaatc aatctctaat agaatatacg tccttaggac gtatattcta
      901 ttagagacta aaccgaaaag gttgaatatg tatcttatcg aagaagcgct aacgtcttgg
      961 ttgttgaatg aatataaaaa accagtcata accaaagaag aaatctcttt gcagatttac
     1021 cttttttatt taaaaaaaga atataatggt gagaggatat atcaaattag aaagaacaaa
     1081 gcaggaccta atgaatttga aaaaaatata ttaaaattat taaagtcagg ggttttatca
     1141 agagttgaaa gtaacgataa gcatcatgct tacccccatt taattggcgg tttctatgag
     1201 gtcttttttg ttaaaggtaa cgatggttct ccggaaaatg atatagtgtg ctctacgtat
     1261 ccatatggat acttatccta tttatccgct atggattggc ataacatcac agataaaata
     1321 cccaagataa tccactttac gacatgtcgt tccgaacagt ggaagaataa gttctatcat
     1381 gattttcaaa aggataatcc tgatatagac gaagccaaac aattcatgcc tagatttcca
     1441 agaaattctg aggtcaatgg aataaaaatt atcgttacac aagaaacaaa ttatgttgag
     1501 ccaatgaagg ctcgtaattc ccctgtcagg gtatcatcta tcggtaagac ctttatggat
     1561 atgaccaggc ggcctgatta ctgtggtggt gaggagcatg tattggaatc atttattgag
     1621 cacggtaaaa aatatgcacc tctgattata aaggaagtcg ataagcttgg ccgtcatatt
     1681 gacaaggtaa gggttggatt cattttggat agaattattg gggttaataa taaaaaaata
     1741 agcgaatgga aacaagaggc gggtaaatac agaggtagtt cgaaagtgct atctccaaag
     1801 agtccattct caccttactt tgatgaagaa tggtttattt ctattaatgt tgatatggtt
     1861 aagtcttatg gaaaaagaaa ttaataattg gatcgaagag tctggtggga agtacaggtt
     1921 gatgcgccag gctgtacata taatacttaa atctatttct atagaggaga gtttgaatga
     1981 aatgatggtt atgaagggag ggactcttct tggtgttaag catggtagtg atagatacac
     2041 aaaggatatt gatttttcta ccgaaaaaaa actttctgaa attgacttgg gggatttttt
     2101 caataggttt aatgactcaa tggatgttgc tgaggctgaa ttgggatatg gtattaaatg
     2161 taaagttcaa tctcataaaa ttcaacctaa tgcacaagga acatttccaa ctgtacagat
     2221 aaatatagcc ttttgcgatc gttctaatgc gtctgcaatg aaaaggcttg aatctaatca
     2281 atcaccttca gtgataaata tcgattttag ctttaacgaa aaaacgtatg attttgactt
     2341 tttatcatta gatggtgatg atgacaatga tagcgtaaag acctacagct taactgattt
     2401 gatggctgaa aaatatcgat ccgttttgca acaaaaagtt agagagagaa atcgagagca
     2461 agatatatat gatatcaatt atcttttagg taaatatgag ttttctcggc aagataagta
     2521 taaaatactg gagtctcttt taaaaaagag tgaaggtaaa caattggata atctcttaaa
     2581 cgttaaaggt ataagggatg tagaaattat cgagcgttcc agtcagcgat atcaggattt
     2641 atcatccacc gttaaatcat tacctctttt tgaagatgct tatgaaaaag ttgcctgttt
     2701 ctatgaaagt cttccgtggg atatattcaa atgatagcgt tcagttttag tgatattggt
     2761 aacagatgtg aaaacttaga cttattatct acgataaatt gtcaaaatga tgtgtttgga
     2821 atggttatta tggatgggta ttcctgctct gagtggaata tgaaaattct ctctggtagg
     2881 ttagataagt gcgtgttttc tggtgatctg aataaagata ttattgaacc atgcaagtca
     2941 gttcctgtta aggctgcagt atgtttcctt tttaaaaata atacgcacct ccatatatat
     3001 aacgcaggag attgccgtgt atataacaaa agtggagtcc ttctaacaga ggataactcg
     3061 gttgcctgga aaagattaaa ggaaaatgga atcgataata aaaaaatacc tcacctcgtt
     3121 tgttattgcc cagacagaaa ttatctaaca tcatttgttg atttctgctc tgatgagata
     3181 attttcaatc attcagtttt tgatttaaat gatgaaaaca aagaggttat tttatgtact
     3241 gatgggtttt gggagcattt taatgatggt actgttattg acctcatgaa agataaccca
     3301 gaatctaact tggctaaatt tactaaaaat atcccgggta acgcagagaa tcatacggtt
     3361 tgctacgtta gattcccttc ttgatttcgt gttttttgaa gaagctattg agatcttcgt
     3421 gtcatataga taatctcttt tctgtaaaag aaaaaaaccg cctttgcggg gcggttttct
     3481 cttaggttca aagagtttgc ggctcgaaga accaaggtaa ctggcttgga ggagcgcagt
     3541 caccaaaacc tgttctttca gtttagcctt aactggcgca tgacttcaag actaactcct
     3601 ctaaatcagt taccagtggc tgctgccagt ggcgttaagg cgtgtcttac cgggttggac
     3661 tcaagacgat agttaccgga taaggcgcag cagtcgggct gaacgggggg ttcgtgcaca
     3721 cagcccagct tggagcgaac gacctacacc gaactgagat accaacagcg tgagctatga
     3781 gaaagcgcca cgcttcccga agggagaaag gcggacaggt atccggtaag cggcagggtc
     3841 ggaacaggag agcgcacgag ggagccacca gggggaaacg tctggtatct ttaagtcctg
     3901 tcgggtttcg ccacctctga cttgagcgtc gatttctgtg atgctcgtca ggggggcgga
     3961 gcctatggaa aaacgcctgc ggcgcggcct tcttcctgtt cttggtcttt tgctcacatg
     4021 ttctttccgg ccttatcccc tgattctgtg gataaccgtg ctgccgtttt tgtgtaagtc
     4081 agtaccgctc gccgcagccg aacgaccgag cgtagcgagt cagtgagcga ggaagcggaa
     4141 aagcgcctgg acgcgcattt tctccttacg catctgtgcg gaatttcaca cccggcatgg
     4201 ggcacttttc atacaattcg cactgatgcc gcatagttaa gccagtatac actccgctat
     4261 cgctacgtga ctgggtcagg gcttcgcccc gacacccgct gacgcgccct ggcgggcttg
     4321 tctgctgccg aaaacgctcg cggacaagcc gtgagcgcct ccgtcagctt cgttatgttc
     4381 ctgtttcact ttcggtctca aagcgaacct ggatgctgtt ctggagttct tccgcgagtt
     4441 cgtgcagtcg ttcgcacatg gccgcctgtt cgtcggcatc cagagcatcc agtttttcaa
     4501 gcagtgtcag gctctggctt ttgataaatc gcgccatatt cagcgcagtt tgttgctgtt
     4561 tgttcacctt ccgttgttct ccgtcagtac cgggtgtcgg gtggaccctg accaggtggt
     4621 aattgtaaga cgttgcgggc gacggtatta caattgcaca tcctgtcctg tttttttagg
     4681 acgtatcatg gcacagcata tcaactgata aataa
//
