LOCUS       NZ_OW970428             2674 bp    DNA     circular CON 20-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P6, complete sequence.
ACCESSION   NZ_OW970428
VERSION     NZ_OW970428.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082330
            Assembly: GCF_903993095.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993095.2-RS_2024_06_20
            Annotation Date                   :: 06/20/2024 04:01:57
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,492
            CDSs (total)                      :: 5,371
            Genes (coding)                    :: 5,257
            CDSs (with protein)               :: 5,257
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 114
            CDSs (without protein)            :: 114
            Pseudo Genes (ambiguous residues) :: 0 of 114
            Pseudo Genes (frameshifted)       :: 46 of 114
            Pseudo Genes (incomplete)         :: 66 of 114
            Pseudo Genes (internal stop)      :: 15 of 114
            Pseudo Genes (multiple problems)  :: 11 of 114
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970428.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P6"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(join(1968..2674,1..577))
                     /locus_tag="LQV34_RS27330"
     CDS             complement(join(1968..2674,1..577))
                     /locus_tag="LQV34_RS27330"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="WP_163495232.1"
                     /translation="MKSQFMHVELYSREEPAKKTINKSKNLNHQSDVRTTTVSGVLSEM
                     KREEGFTSHLESIHAPDVLYGSISDLERSIERYEAEFKTTDKNGKEKKLRKDACILLAG
                     VVSLDRADEEIWEEYKKSSIEYLKNKYGENLKCVVEHTDETNPHFHFYVVGNQKQDLNL
                     LHDGKLAVSKLAKEDKKKLHQTVYTEAMIKFQDDFYTKVSNKFGLSRTGEEPRERYKSR
                     PDYLRFKKRQETALNILSDIEEFEADIKEKARKTGYSKGAKQFQNKTWVIKVGEAIKLL
                     GKEHKAELDQKEKDLEKIKKEKTEIETELNLKKEELSNAYSQRNEASRKNSVYIDKVNA
                     LKKENKLLLPYKDQFDLKLQQEKEPLQAEVKELTSENTNLKNENSELKKENLDFKEFIL
                     GVKNYYGSKFQEWYEEVFNPKTKTKPKF"
                     /name="plasmid recombination protein"
     gene            complement(821..1420)
                     /locus_tag="LQV34_RS27335"
                     /old_locus_tag="AI2770V1_5192"
     CDS             complement(821..1420)
                     /locus_tag="LQV34_RS27335"
                     /old_locus_tag="AI2770V1_5192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_094327210.1"
                     /translation="MAKAKVLIDDTEEAIIKNALDVDDMNEVNINVTRKKKTGFLGTYS
                     IVFHDSVKTLSKMNLKPNAYKIVMYLFGIIEMGNILVNFSQKKIADDLGLQPSNVSRAF
                     KELFEKKVLIKDSEDGHVYLNSNLCTMGVPKNFDQKRMKSLQKSNIETEDFKNQINLFT
                     PTNTTKIKTNDKKVIKKKEKENVLEFPMQNDWVDIE"
                     /name="helix-turn-helix domain-containing protein"
ORIGIN
        1 tgatcatagc ttctgtgtag actgtttgat gtaatttttt cttatcttct tttgctaatt
       61 tagatactgc gagctttcca tcatgaagca aatttaaatc ttgtttttga ttaccgacca
      121 cataaaagtg aaaatgtggg tttgtttcgt ctgtatgctc aacaacacat tttaaatttt
      181 caccatattt atttttcaaa tattcaatag atgatttctt gtattcttcc caaatttctt
      241 catctgctcg atctagagaa accacaccag caagcaagat gcatgcatct ttgcgtagct
      301 tcttctcttt gccgttttta tcagtagtct taaattcagc ctcgtaacgc tctatagagc
      361 gttctagatc gcttatagag ccatacagca catcaggtgc atgtatgctc tctaaatgtg
      421 atgtaaaacc ttcttccctt ttcatttctg acaacacacc ggaaacggtt gttgttctaa
      481 catcagattg atgatttaga tttttacttt tatttattgt cttttttgct ggttcttctc
      541 tgctgtagag ttctacatgc ataaattgtg atttcatttt caattctcct atattttaat
      601 ttcccttata tatgtaatta acagttattg tttttctgtc aatagctata ggaaccgact
      661 atatctatta cgctagcata tttcatatgc tgctccatag atgcggccct acggggttaa
      721 agtcaacttc aaaacaaaaa agcaaatccc taaaccttgc aaattttata tttgcgaggt
      781 ttagggattc agcaaacgaa gtgcggtagt attagtttta ctattcaata tcaacccaat
      841 cattttgcat tggaaactct aaaacgtttt ctttttcctt tttcttgata actttcttat
      901 cattggtttt tatttttgtt gtatttgtag gagtaaataa attgatctga tttttaaaat
      961 cttcagtttc aatatttgat ttttgtaaac ttttcattct cttttgatca aaatttttcg
     1021 gaacacccat agtgcataga tttgaattca agtaaacgtg tccgtcttcg ctatctttga
     1081 ttaaaacttt tttttcaaaa agttctttga aagctcttga tacgtttgaa ggctgcaaac
     1141 ctaaatcatc agcaatcttt ttctgtgaga agttaactaa aatattaccc atctctatta
     1201 tgccaaataa gtacattaca atcttatatg cattaggctt taagttcatt ttagatagtg
     1261 ttttcacaga gtcatgaaaa actattgaat aagttcctaa aaacccagtt ttcttctttc
     1321 tcgtgacgtt aatgtttact tcattcatat catcaacatc taatgcattt tttattattg
     1381 cttcttctgt atcgtctatt aaaacttttg cttttgccat ttttatattc ctttttgtag
     1441 taaaaataat aatctatgtt gcatttataa ccgatctaaa tgcaatgtca atatcaaaac
     1501 gataagaaag ttatcgtttc aacatcaaat catatcaatg cacctgtatg caaaattatg
     1561 attttcataa gtctgattat gattttcata attttgcatt atgattttca taatcgaaaa
     1621 ttatgatttt cataattttt tttttggtaa agtgttgata tataaggctt taaagggtgc
     1681 ttaagaagta agaaaataag aaagaagaaa ccgtaacttc aactgcctta ccgcctcccc
     1741 ttcgggtcgt tggacaaccg ctcaaaccac agaaccagag gttctgcagt tttcacggtt
     1801 cacggtttaa gtattttttc tttataagtt attgatattt aaaggttact aactgcgtgc
     1861 aaactacttt ttttgggata aatcccagct atgacagcta aacgctgtca ggccgcttct
     1921 ggtggtgtct catacaccac ataggcggca aatatgaaaa tattcaatta aaatttgggt
     1981 tttgtttttg tttttgggtt gaatacttcc tcgtaccatt cctgaaattt agatccatag
     2041 taatttttaa cacccaaaat aaattctttg aaatctaaat tttctttttt cagttctgaa
     2101 ttctcatttt tcaaattggt attttcagaa gtcaactctt tgacttctgc ttgtaatggc
     2161 tctttttcct gctgtaattt caaatcaaat tgatctttgt atggaagtaa taatttattt
     2221 tcttttttta gagcgtttac tttatcaata taaacgctgt tttttctcga tgcttcattt
     2281 ctttgactat atgcattaga taattcttct tttttcaaat taagctcagt ttcaatttct
     2341 gttttttctt tttttatttt ttctaagtct ttttcttttt gatctaattc tgctttatgc
     2401 tcttttccaa gtaatttaat tgcctcacca actttaatta cccatgtttt attttgaaat
     2461 tgttttgcac ctttactata tccagttttc cttgcttttt ctttaatatc agcttcaaat
     2521 tcttctatat cagacaatat atttaatgct gtttcttgtc tttttttaaa tctcaagtaa
     2581 tcagggcggg atttatagcg ttctcgcggc tcctcgcccg ttctgctcaa tccaaattta
     2641 ttagatacct ttgtataaaa atcatcttga aatt
//
