LOCUS       NZ_OW970421             2674 bp    DNA     circular CON 20-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P8, complete sequence.
ACCESSION   NZ_OW970421
VERSION     NZ_OW970421.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082333
            Assembly: GCF_903993055.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993055.2-RS_2024_06_20
            Annotation Date                   :: 06/20/2024 04:03:27
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,550
            CDSs (total)                      :: 5,429
            Genes (coding)                    :: 5,292
            CDSs (with protein)               :: 5,292
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 49 of 137
            Pseudo Genes (incomplete)         :: 87 of 137
            Pseudo Genes (internal stop)      :: 17 of 137
            Pseudo Genes (multiple problems)  :: 14 of 137
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970421.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P8"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(19..618)
                     /locus_tag="LQV26_RS27625"
                     /old_locus_tag="AI2998V1_5250"
     CDS             complement(19..618)
                     /locus_tag="LQV26_RS27625"
                     /old_locus_tag="AI2998V1_5250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_094327210.1"
                     /translation="MAKAKVLIDDTEEAIIKNALDVDDMNEVNINVTRKKKTGFLGTYS
                     IVFHDSVKTLSKMNLKPNAYKIVMYLFGIIEMGNILVNFSQKKIADDLGLQPSNVSRAF
                     KELFEKKVLIKDSEDGHVYLNSNLCTMGVPKNFDQKRMKSLQKSNIETEDFKNQINLFT
                     PTNTTKIKTNDKKVIKKKEKENVLEFPMQNDWVDIE"
                     /name="helix-turn-helix domain-containing protein"
     gene            complement(1166..2449)
                     /locus_tag="LQV26_RS27630"
                     /old_locus_tag="AI2998V1_5251"
     CDS             complement(1166..2449)
                     /locus_tag="LQV26_RS27630"
                     /old_locus_tag="AI2998V1_5251"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="WP_163495232.1"
                     /translation="MKSQFMHVELYSREEPAKKTINKSKNLNHQSDVRTTTVSGVLSEM
                     KREEGFTSHLESIHAPDVLYGSISDLERSIERYEAEFKTTDKNGKEKKLRKDACILLAG
                     VVSLDRADEEIWEEYKKSSIEYLKNKYGENLKCVVEHTDETNPHFHFYVVGNQKQDLNL
                     LHDGKLAVSKLAKEDKKKLHQTVYTEAMIKFQDDFYTKVSNKFGLSRTGEEPRERYKSR
                     PDYLRFKKRQETALNILSDIEEFEADIKEKARKTGYSKGAKQFQNKTWVIKVGEAIKLL
                     GKEHKAELDQKEKDLEKIKKEKTEIETELNLKKEELSNAYSQRNEASRKNSVYIDKVNA
                     LKKENKLLLPYKDQFDLKLQQEKEPLQAEVKELTSENTNLKNENSELKKENLDFKEFIL
                     GVKNYYGSKFQEWYEEVFNPKTKTKPKF"
                     /name="plasmid recombination protein"
ORIGIN
        1 gcggtagtat tagttttact attcaatatc aacccaatca ttttgcattg gaaactctaa
       61 aacgttttct ttttcctttt tcttgataac tttcttatca ttggttttta tttttgttgt
      121 atttgtagga gtaaataaat tgatctgatt tttaaaatct tcagtttcaa tatttgattt
      181 ttgtaaactt ttcattctct tttgatcaaa atttttcgga acacccatag tgcatagatt
      241 tgaattcaag taaacgtgtc cgtcttcgct atctttgatt aaaacttttt tttcaaaaag
      301 ttctttgaaa gctcttgata cgtttgaagg ctgcaaacct aaatcatcag caatcttttt
      361 ctgtgagaag ttaactaaaa tattacccat ctctattatg ccaaataagt acattacaat
      421 cttatatgca ttaggcttta agttcatttt agatagtgtt ttcacagagt catgaaaaac
      481 tattgaataa gttcctaaaa acccagtttt cttctttctc gtgacgttaa tgtttacttc
      541 attcatatca tcaacatcta atgcattttt tattattgct tcttctgtat cgtctattaa
      601 aacttttgct tttgccattt ttatattcct ttttgtagta aaaataataa tctatgttgc
      661 atttataacc gatctaaatg caatgtcaat atcaaaacga taagaaagtt atcgtttcaa
      721 catcaaatca tatcaatgca cctgtatgca aaattatgat tttcataagt ctgattatga
      781 ttttcataat tttgcattat gattttcata atcgaaaatt atgattttca taattttttt
      841 tttggtaaag tgttgatata taaggcttta aagggtgctt aagaagtaag aaaataagaa
      901 agaagaaacc gtaacttcaa ctgccttacc gcctcccctt cgggtcgttg gacaaccgct
      961 caaaccacag aaccagaggt tctgcagttt tcacggttca cggtttaagt attttttctt
     1021 tataagttat tgatatttaa aggttactaa ctgcgtgcaa actacttttt ttgggataaa
     1081 tcccagctat gacagctaaa cgctgtcagg ccgcttctgg tggtgtctca tacaccacat
     1141 aggcggcaaa tatgaaaata ttcaattaaa atttgggttt tgtttttgtt tttgggttga
     1201 atacttcctc gtaccattcc tgaaatttag atccatagta atttttaaca cccaaaataa
     1261 attctttgaa atctaaattt tcttttttca gttctgaatt ctcatttttc aaattggtat
     1321 tttcagaagt caactctttg acttctgctt gtaatggctc tttttcctgc tgtaatttca
     1381 aatcaaattg atctttgtat ggaagtaata atttattttc tttttttaga gcgtttactt
     1441 tatcaatata aacgctgttt tttctcgatg cttcatttct ttgactatat gcattagata
     1501 attcttcttt tttcaaatta agctcagttt caatttctgt tttttctttt tttatttttt
     1561 ctaagtcttt ttctttttga tctaattctg ctttatgctc ttttccaagt aatttaattg
     1621 cctcaccaac tttaattacc catgttttat tttgaaattg ttttgcacct ttactatatc
     1681 cagttttcct tgctttttct ttaatatcag cttcaaattc ttctatatca gacaatatat
     1741 ttaatgctgt ttcttgtctt tttttaaatc tcaagtaatc agggcgggat ttatagcgtt
     1801 ctcgcggctc ctcgcccgtt ctgctcaatc caaatttatt agataccttt gtataaaaat
     1861 catcttgaaa tttgatcata gcttctgtgt agactgtttg atgtaatttt ttcttatctt
     1921 cttttgctaa tttagatact gcgagctttc catcatgaag caaatttaaa tcttgttttt
     1981 gattaccgac cacataaaag tgaaaatgtg ggtttgtttc gtctgtatgc tcaacaacac
     2041 attttaaatt ttcaccatat ttatttttca aatattcaat agatgatttc ttgtattctt
     2101 cccaaatttc ttcatctgct cgatctagag aaaccacacc agcaagcaag atgcatgcat
     2161 ctttgcgtag cttcttctct ttgccgtttt tatcagtagt cttaaattca gcctcgtaac
     2221 gctctataga gcgttctaga tcgcttatag agccatacag cacatcaggt gcatgtatgc
     2281 tctctaaatg tgatgtaaaa ccttcttccc ttttcatttc tgacaacaca ccggaaacgg
     2341 ttgttgttct aacatcagat tgatgattta gatttttact tttatttatt gtcttttttg
     2401 ctggttcttc tctgctgtag agttctacat gcataaattg tgatttcatt ttcaattctc
     2461 ctatatttta atttccctta tatatgtaat taacagttat tgtttttctg tcaatagcta
     2521 taggaaccga ctatatctat tacgctagca tatttcatat gctgctccat agatgcggcc
     2581 ctacggggtt aaagtcaact tcaaaacaaa aaagcaaatc cctaaacctt gcaaatttta
     2641 tatttgcgag gtttagggat tcagcaaacg aagt
//
