LOCUS       NZ_OW970419             4715 bp    DNA     circular CON 20-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P6, complete sequence.
ACCESSION   NZ_OW970419
VERSION     NZ_OW970419.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082333
            Assembly: GCF_903993055.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993055.2-RS_2024_06_20
            Annotation Date                   :: 06/20/2024 04:03:27
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,550
            CDSs (total)                      :: 5,429
            Genes (coding)                    :: 5,292
            CDSs (with protein)               :: 5,292
            Genes (RNA)                       :: 121
            rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 137
            CDSs (without protein)            :: 137
            Pseudo Genes (ambiguous residues) :: 0 of 137
            Pseudo Genes (frameshifted)       :: 49 of 137
            Pseudo Genes (incomplete)         :: 87 of 137
            Pseudo Genes (internal stop)      :: 17 of 137
            Pseudo Genes (multiple problems)  :: 14 of 137
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970419.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P6"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(256..450)
                     /locus_tag="LQV26_RS27575"
                     /old_locus_tag="AI2998V1_5242"
     CDS             complement(256..450)
                     /locus_tag="LQV26_RS27575"
                     /old_locus_tag="AI2998V1_5242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            1526..2482
                     /locus_tag="LQV26_RS27580"
                     /old_locus_tag="AI2998V1_5243"
     CDS             1526..2482
                     /locus_tag="LQV26_RS27580"
                     /old_locus_tag="AI2998V1_5243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            2466..3332
                     /locus_tag="LQV26_RS27585"
                     /old_locus_tag="AI2998V1_5244"
     CDS             2466..3332
                     /locus_tag="LQV26_RS27585"
                     /old_locus_tag="AI2998V1_5244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     gene            3314..3982
                     /locus_tag="LQV26_RS27590"
                     /old_locus_tag="AI2998V1_5245"
     CDS             3314..3982
                     /locus_tag="LQV26_RS27590"
                     /old_locus_tag="AI2998V1_5245"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(4204..4317)
                     /locus_tag="LQV26_RS27785"
     CDS             complement(4204..4317)
                     /locus_tag="LQV26_RS27785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     Typing          99..183
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          487..585
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          710..965
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(4246..4715)
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.703"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 agtcagtgag cgaggaagcg gaaaagcgcc tggacgcgca ttttctcctt acgcatctgt
       61 gcggaatttc acacccggca tggggcactt ttcatacaat tcgcactgat gccgcatagt
      121 taagccagta tacactccgc tatcgctacg tgactgggtc agggcttcgc cccgacaccc
      181 gctgacgcgc cctggcgggc ttgtctgctg ccgaaaacgc tcgcggacaa gccgtgagcg
      241 cctccgtcag cttcgttatg ttcctgtttc actttcggtc tcaaagcgaa cctggatgct
      301 gttctggagt tcttccgcga gttcgtgcag tcgttcgcac atggccgcct gttcgtcggc
      361 atccagagca tccagttttt caagcagtgt caggctctgg cttttgataa atcgcgccat
      421 attcagcgca gtttgttgct gtttgttcac cttccgttgt tctccgtcag taccgggtgt
      481 cgggtggacc ctgaccaggt ggtaattgta agacgttgcg ggcgacggta ttacaattgc
      541 acatcctgtc ctgttttttt aggacgtatc atggcacagc atatcaactg ataaataatc
      601 cctgtgcagt gcagccgctg ttgcataaaa tttcgctctg cgtcgagtgt ttcttaatca
      661 ataattccgc tgatactccg gaaaaacgcg agtctgttct catgcctgaa atgcccacac
      721 cccacgcaaa aacaattttt tgctgatttt tctttataaa tagagagtta tgacaaatta
      781 gttcttcttg ctctctttgt gatatttaaa aaagcggtgt cggcgcggtg ttgtagctgc
      841 gccaacaccg ctttttaggg gtggtactga ctattttcat aaaaaacatc attttatatt
      901 aggggggctg ctagcggcgc ggtgtgtttt tttacaggac gcccctgggg gcgctgctag
      961 gggtgtctgt tcagatatgt agcaatgagt cagggattca cgaactgaaa atgtccgaaa
     1021 atgtgtctca tgggcactgt atgcgcccaa accgatcgtc attcactttc atgcatagct
     1081 atgcagtgag ctgaaagcga tcctgacgca tttttccggt ttaccccggg gagaacatct
     1141 ctttttgcgg tgttcgcggc agaatcgcgt tcagcgcgtt ttagcggtgc gcgtaatgcg
     1201 acgttatggt aaatgacgct gaaaaatgat cttttacgct catcgtttat gagcaacaga
     1261 tgtcctaatc atggatttga actataaccg gcgctgaatt gatcgcatga ggtgttatga
     1321 aaacggtgat ataagtaaac tttttcttga cttcctactt attatcctat aaaataaatc
     1381 cttaggattt attttatagg atatcaaaaa tataaaaatg gcaaatgctt gtttgttatt
     1441 atttttttct tgacaatcaa tctctaatag aatatacgtc cttaggacgt atattctatt
     1501 agagactaaa ccgaaaaggt tgaatatgta tcttatcgaa gaagcgctaa cgtcttggtt
     1561 gttgaatgaa tataaaaaac cagtcataac caaagaagaa atctctttgc agatttacct
     1621 tttttattta aaaaaagaat ataatggtga gaggatatat caaattagaa agaacaaagc
     1681 aggacctaat gaatttgaaa aaaatatatt aaaattatta aagtcagggg ttttatcaag
     1741 agttgaaagt aacgataagc atcatgctta cccccattta attggcggtt tctatgaggt
     1801 cttttttgtt aaaggtaacg atggttctcc ggaaaatgat atagtgtgct ctacgtatcc
     1861 atatggatac ttatcctatt tatccgctat ggattggcat aacatcacag ataaaatacc
     1921 caagataatc cactttacga catgtcgttc cgaacagtgg aagaataagt tctatcatga
     1981 ttttcaaaag gataatcctg atatagacga agccaaacaa ttcatgccta gatttccaag
     2041 aaattctgag gtcaatggaa taaaaattat cgttacacaa gaaacaaatt atgttgagcc
     2101 aatgaaggct cgtaattccc ctgtcagggt atcatctatc ggtaagacct ttatggatat
     2161 gaccaggcgg cctgattact gtggtggtga ggagcatgta ttggaatcat ttattgagca
     2221 cggtaaaaaa tatgcacctc tgattataaa ggaagtcgat aagcttggcc gtcatattga
     2281 caaggtaagg gttggattca ttttggatag aattattggg gttaataata aaaaaataag
     2341 cgaatggaaa caagaggcgg gtaaatacag aggtagttcg aaagtgctat ctccaaagag
     2401 tccattctca ccttactttg atgaagaatg gtttatttct attaatgttg atatggttaa
     2461 gtcttatgga aaaagaaatt aataattgga tcgaagagtc tggtgggaag tacaggttga
     2521 tgcgccaggc tgtacatata atacttaaat ctatttctat agaggagagt ttgaatgaaa
     2581 tgatggttat gaagggaggg actcttcttg gtgttaagca tggtagtgat agatacacaa
     2641 aggatattga tttttctacc gaaaaaaaac tttctgaaat tgacttgggg gattttttca
     2701 ataggtttaa tgactcaatg gatgttgctg aggctgaatt gggatatggt attaaatgta
     2761 aagttcaatc tcataaaatt caacctaatg cacaaggaac atttccaact gtacagataa
     2821 atatagcctt ttgcgatcgt tctaatgcgt ctgcaatgaa aaggcttgaa tctaatcaat
     2881 caccttcagt gataaatatc gattttagct ttaacgaaaa aacgtatgat tttgactttt
     2941 tatcattaga tggtgatgat gacaatgata gcgtaaagac ctacagctta actgatttga
     3001 tggctgaaaa atatcgatcc gttttgcaac aaaaagttag agagagaaat cgagagcaag
     3061 atatatatga tatcaattat cttttaggta aatatgagtt ttctcggcaa gataagtata
     3121 aaatactgga gtctctttta aaaaagagtg aaggtaaaca attggataat ctcttaaacg
     3181 ttaaaggtat aagggatgta gaaattatcg agcgttccag tcagcgatat caggatttat
     3241 catccaccgt taaatcatta cctctttttg aagatgctta tgaaaaagtt gcctgtttct
     3301 atgaaagtct tccgtgggat atattcaaat gatagcgttc agttttagtg atattggtaa
     3361 cagatgtgaa aacttagact tattatctac gataaattgt caaaatgatg tgtttggaat
     3421 ggttattatg gatgggtatt cctgctctga gtggaatatg aaaattctct ctggtaggtt
     3481 agataagtgc gtgttttctg gtgatctgaa taaagatatt attgaaccat gcaagtcagt
     3541 tcctgttaag gctgcagtat gtttcctttt taaaaataat acgcacctcc atatatataa
     3601 cgcaggagat tgccgtgtat ataacaaaag tggagtcctt ctaacagagg ataactcggt
     3661 tgcctggaaa agattaaagg aaaatggaat cgataataaa aaaatacctc acctcgtttg
     3721 ttattgccca gacagaaatt atctaacatc atttgttgat ttctgctctg atgagataat
     3781 tttcaatcat tcagtttttg atttaaatga tgaaaacaaa gaggttattt tatgtactga
     3841 tgggttttgg gagcatttta atgatggtac tgttattgac ctcatgaaag ataacccaga
     3901 atctaacttg gctaaattta ctaaaaatat cccgggtaac gcagagaatc atacggtttg
     3961 ctacgttaga ttcccttctt gatttcgtgt tttttgaaga agctattgag atcttcgtgt
     4021 catatagata atctcttttc tgtaaaagaa aaaaaccgcc tttgcggggc ggttttctct
     4081 taggttcaaa gagtttgcgg ctcgaagaac caaggtaact ggcttggagg agcgcagtca
     4141 ccaaaacctg ttctttcagt ttagccttaa ctggcgcatg acttcaagac taactcctct
     4201 aaatcagtta ccagtggctg ctgccagtgg cgttaaggcg tgtcttaccg ggttggactc
     4261 aagacgatag ttaccggata aggcgcagca gtcgggctga acggggggtt cgtgcacaca
     4321 gcccagcttg gagcgaacga cctacaccga actgagatac caacagcgtg agctatgaga
     4381 aagcgccacg cttcccgaag ggagaaaggc ggacaggtat ccggtaagcg gcagggtcgg
     4441 aacaggagag cgcacgaggg agccaccagg gggaaacgtc tggtatcttt aagtcctgtc
     4501 gggtttcgcc acctctgact tgagcgtcga tttctgtgat gctcgtcagg ggggcggagc
     4561 ctatggaaaa acgcctgcgg cgcggccttc ttcctgttct tggtcttttg ctcacatgtt
     4621 ctttccggcc ttatcccctg attctgtgga taaccgtgct gccgtttttg tgtaagtcag
     4681 taccgctcgc cgcagccgaa cgaccgagcg tagcg
//
