LOCUS       NZ_OW970373             2674 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P8, complete sequence.
ACCESSION   NZ_OW970373
VERSION     NZ_OW970373.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082334
            Assembly: GCF_903993005.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993005.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:16:35
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,580
            CDSs (total)                      :: 5,458
            Genes (coding)                    :: 5,322
            CDSs (with protein)               :: 5,322
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 51 of 136
            Pseudo Genes (incomplete)         :: 84 of 136
            Pseudo Genes (internal stop)      :: 17 of 136
            Pseudo Genes (multiple problems)  :: 14 of 136
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970373.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2674
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P8"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            complement(join(1627..2674,1..236))
                     /locus_tag="LQV23_RS27765"
     CDS             complement(join(1627..2674,1..236))
                     /locus_tag="LQV23_RS27765"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid recombination protein"
                     /protein_id="WP_163495232.1"
                     /translation="MKSQFMHVELYSREEPAKKTINKSKNLNHQSDVRTTTVSGVLSEM
                     KREEGFTSHLESIHAPDVLYGSISDLERSIERYEAEFKTTDKNGKEKKLRKDACILLAG
                     VVSLDRADEEIWEEYKKSSIEYLKNKYGENLKCVVEHTDETNPHFHFYVVGNQKQDLNL
                     LHDGKLAVSKLAKEDKKKLHQTVYTEAMIKFQDDFYTKVSNKFGLSRTGEEPRERYKSR
                     PDYLRFKKRQETALNILSDIEEFEADIKEKARKTGYSKGAKQFQNKTWVIKVGEAIKLL
                     GKEHKAELDQKEKDLEKIKKEKTEIETELNLKKEELSNAYSQRNEASRKNSVYIDKVNA
                     LKKENKLLLPYKDQFDLKLQQEKEPLQAEVKELTSENTNLKNENSELKKENLDFKEFIL
                     GVKNYYGSKFQEWYEEVFNPKTKTKPKF"
                     /name="plasmid recombination protein"
     gene            complement(480..1079)
                     /locus_tag="LQV23_RS27770"
                     /old_locus_tag="AI3000V1_5271"
     CDS             complement(480..1079)
                     /locus_tag="LQV23_RS27770"
                     /old_locus_tag="AI3000V1_5271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019704520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_094327210.1"
                     /translation="MAKAKVLIDDTEEAIIKNALDVDDMNEVNINVTRKKKTGFLGTYS
                     IVFHDSVKTLSKMNLKPNAYKIVMYLFGIIEMGNILVNFSQKKIADDLGLQPSNVSRAF
                     KELFEKKVLIKDSEDGHVYLNSNLCTMGVPKNFDQKRMKSLQKSNIETEDFKNQINLFT
                     PTNTTKIKTNDKKVIKKKEKENVLEFPMQNDWVDIE"
                     /name="helix-turn-helix domain-containing protein"
ORIGIN
        1 tcgtaacgct ctatagagcg ttctagatcg cttatagagc catacagcac atcaggtgca
       61 tgtatgctct ctaaatgtga tgtaaaacct tcttcccttt tcatttctga caacacaccg
      121 gaaacggttg ttgttctaac atcagattga tgatttagat ttttactttt atttattgtc
      181 ttttttgctg gttcttctct gctgtagagt tctacatgca taaattgtga tttcattttc
      241 aattctccta tattttaatt tcccttatat atgtaattaa cagttattgt ttttctgtca
      301 atagctatag gaaccgacta tatctattac gctagcatat ttcatatgct gctccataga
      361 tgcggcccta cggggttaaa gtcaacttca aaacaaaaaa gcaaatccct aaaccttgca
      421 aattttatat ttgcgaggtt tagggattca gcaaacgaag tgcggtagta ttagttttac
      481 tattcaatat caacccaatc attttgcatt ggaaactcta aaacgttttc tttttccttt
      541 ttcttgataa ctttcttatc attggttttt atttttgttg tatttgtagg agtaaataaa
      601 ttgatctgat ttttaaaatc ttcagtttca atatttgatt tttgtaaact tttcattctc
      661 ttttgatcaa aatttttcgg aacacccata gtgcatagat ttgaattcaa gtaaacgtgt
      721 ccgtcttcgc tatctttgat taaaactttt ttttcaaaaa gttctttgaa agctcttgat
      781 acgtttgaag gctgcaaacc taaatcatca gcaatctttt tctgtgagaa gttaactaaa
      841 atattaccca tctctattat gccaaataag tacattacaa tcttatatgc attaggcttt
      901 aagttcattt tagatagtgt tttcacagag tcatgaaaaa ctattgaata agttcctaaa
      961 aacccagttt tcttctttct cgtgacgtta atgtttactt cattcatatc atcaacatct
     1021 aatgcatttt ttattattgc ttcttctgta tcgtctatta aaacttttgc ttttgccatt
     1081 tttatattcc tttttgtagt aaaaataata atctatgttg catttataac cgatctaaat
     1141 gcaatgtcaa tatcaaaacg ataagaaagt tatcgtttca acatcaaatc atatcaatgc
     1201 acctgtatgc aaaattatga ttttcataag tctgattatg attttcataa ttttgcatta
     1261 tgattttcat aatcgaaaat tatgattttc ataatttttt ttttggtaaa gtgttgatat
     1321 ataaggcttt aaagggtgct taagaagtaa gaaaataaga aagaagaaac cgtaacttca
     1381 actgccttac cgcctcccct tcgggtcgtt ggacaaccgc tcaaaccaca gaaccagagg
     1441 ttctgcagtt ttcacggttc acggtttaag tattttttct ttataagtta ttgatattta
     1501 aaggttacta actgcgtgca aactactttt tttgggataa atcccagcta tgacagctaa
     1561 acgctgtcag gccgcttctg gtggtgtctc atacaccaca taggcggcaa atatgaaaat
     1621 attcaattaa aatttgggtt ttgtttttgt ttttgggttg aatacttcct cgtaccattc
     1681 ctgaaattta gatccatagt aatttttaac acccaaaata aattctttga aatctaaatt
     1741 ttcttttttc agttctgaat tctcattttt caaattggta ttttcagaag tcaactcttt
     1801 gacttctgct tgtaatggct ctttttcctg ctgtaatttc aaatcaaatt gatctttgta
     1861 tggaagtaat aatttatttt ctttttttag agcgtttact ttatcaatat aaacgctgtt
     1921 ttttctcgat gcttcatttc tttgactata tgcattagat aattcttctt ttttcaaatt
     1981 aagctcagtt tcaatttctg ttttttcttt ttttattttt tctaagtctt tttctttttg
     2041 atctaattct gctttatgct cttttccaag taatttaatt gcctcaccaa ctttaattac
     2101 ccatgtttta ttttgaaatt gttttgcacc tttactatat ccagttttcc ttgctttttc
     2161 tttaatatca gcttcaaatt cttctatatc agacaatata tttaatgctg tttcttgtct
     2221 ttttttaaat ctcaagtaat cagggcggga tttatagcgt tctcgcggct cctcgcccgt
     2281 tctgctcaat ccaaatttat tagatacctt tgtataaaaa tcatcttgaa atttgatcat
     2341 agcttctgtg tagactgttt gatgtaattt tttcttatct tcttttgcta atttagatac
     2401 tgcgagcttt ccatcatgaa gcaaatttaa atcttgtttt tgattaccga ccacataaaa
     2461 gtgaaaatgt gggtttgttt cgtctgtatg ctcaacaaca cattttaaat tttcaccata
     2521 tttatttttc aaatattcaa tagatgattt cttgtattct tcccaaattt cttcatctgc
     2581 tcgatctaga gaaaccacac cagcaagcaa gatgcatgca tctttgcgta gcttcttctc
     2641 tttgccgttt ttatcagtag tcttaaattc agcc
//
