LOCUS       NZ_OW970371             4715 bp    DNA     circular CON 19-JUN-2024
DEFINITION  Klebsiella pneumoniae isolate 147 plasmid P6, complete sequence.
ACCESSION   NZ_OW970371
VERSION     NZ_OW970371.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA7082334
            Assembly: GCF_903993005.2
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Alioto,T., Alioto,T. and Gomez Garrido,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-MAY-2022) CNAG-CRG, CNAG, Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_903993005.2-RS_2024_06_19
            Annotation Date                   :: 06/19/2024 11:16:35
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,580
            CDSs (total)                      :: 5,458
            Genes (coding)                    :: 5,322
            CDSs (with protein)               :: 5,322
            Genes (RNA)                       :: 122
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 87
            ncRNAs                            :: 10
            Pseudo Genes (total)              :: 136
            CDSs (without protein)            :: 136
            Pseudo Genes (ambiguous residues) :: 0 of 136
            Pseudo Genes (frameshifted)       :: 51 of 136
            Pseudo Genes (incomplete)         :: 84 of 136
            Pseudo Genes (internal stop)      :: 17 of 136
            Pseudo Genes (multiple problems)  :: 14 of 136
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OW970371.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="147"
                     /isolation_source="Hospital Univeristario de Bellvitge
                     (Barcelona)"
                     /host="Homo sapiens"
                     /db_xref="taxon:573"
                     /plasmid="P6"
                     /geo_loc_name="Spain"
                     /collection_date="2017"
     gene            371..484
                     /locus_tag="LQV23_RS27935"
     CDS             371..484
                     /locus_tag="LQV23_RS27935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001427893.1"
                     /translation="MHEPPVQPDCCALSGNYRLESNPVRHALTPLAAATGN"
                     /name="hypothetical protein"
     gene            complement(706..1374)
                     /locus_tag="LQV23_RS27720"
                     /old_locus_tag="AI3000V1_5263"
     CDS             complement(706..1374)
                     /locus_tag="LQV23_RS27720"
                     /old_locus_tag="AI3000V1_5263"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016249761.1"
                     /GO_function="GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein phosphatase"
                     /protein_id="WP_223195384.1"
                     /translation="MGYIQMIAFSFSDIGNRCENLDLLSTINCQNDVFGMVIMDGYSCS
                     EWNMKILSGRLDKCVFSGDLNKDIIEPCKSVPVKAAVCFLFKNNTHLHIYNAGDCRVYN
                     KSGVLLTEDNSVAWKRLKENGIDNKKIPHLVCYCPDRNYLTSFVDFCSDEIIFNHSVFD
                     LNDENKEVILCTDGFWEHFNDGTVIDLMKDNPESNLAKFTKNIPGNAENHTVCYVRFPS
                     "
                     /name="PP2C family serine/threonine-protein phosphatase"
     gene            complement(1356..2222)
                     /locus_tag="LQV23_RS27725"
                     /old_locus_tag="AI3000V1_5264"
     CDS             complement(1356..2222)
                     /locus_tag="LQV23_RS27725"
                     /old_locus_tag="AI3000V1_5264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000409995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="WP_000409995.1"
                     /translation="MEKEINNWIEESGGKYRLMRQAVHIILKSISIEESLNEMMVMKGG
                     TLLGVKHGSDRYTKDIDFSTEKKLSEIDLGDFFNRFNDSMDVAEAELGYGIKCKVQSHK
                     IQPNAQGTFPTVQINIAFCDRSNASAMKRLESNQSPSVINIDFSFNEKTYDFDFLSLDG
                     DDDNDSVKTYSLTDLMAEKYRSVLQQKVRERNREQDIYDINYLLGKYEFSRQDKYKILE
                     SLLKKSEGKQLDNLLNVKGIRDVEIIERSSQRYQDLSSTVKSLPLFEDAYEKVACFYES
                     LPWDIFK"
                     /name="nucleotidyl transferase AbiEii/AbiGii toxin family
                     protein"
     gene            complement(2206..3162)
                     /locus_tag="LQV23_RS27730"
                     /old_locus_tag="AI3000V1_5265"
     CDS             complement(2206..3162)
                     /locus_tag="LQV23_RS27730"
                     /old_locus_tag="AI3000V1_5265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000280763.1"
                     /translation="MYLIEEALTSWLLNEYKKPVITKEEISLQIYLFYLKKEYNGERIY
                     QIRKNKAGPNEFEKNILKLLKSGVLSRVESNDKHHAYPHLIGGFYEVFFVKGNDGSPEN
                     DIVCSTYPYGYLSYLSAMDWHNITDKIPKIIHFTTCRSEQWKNKFYHDFQKDNPDIDEA
                     KQFMPRFPRNSEVNGIKIIVTQETNYVEPMKARNSPVRVSSIGKTFMDMTRRPDYCGGE
                     EHVLESFIEHGKKYAPLIIKEVDKLGRHIDKVRVGFILDRIIGVNNKKISEWKQEAGKY
                     RGSSKVLSPKSPFSPYFDEEWFISINVDMVKSYGKRN"
                     /name="hypothetical protein"
     gene            4238..4432
                     /locus_tag="LQV23_RS27735"
                     /old_locus_tag="AI3000V1_5266"
     CDS             4238..4432
                     /locus_tag="LQV23_RS27735"
                     /old_locus_tag="AI3000V1_5266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_001041633.1"
                     /translation="MNKQQQTALNMARFIKSQSLTLLEKLDALDADEQAAMCERLHELA
                     EELQNSIQVRFETESETGT"
                     /name="Rop family plasmid primer RNA-binding protein"
     Typing          complement(3724..3979)
                     /name="MOBF"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.124"
                     /coverage="89.0"
                     /evalue="5.65e-115"
     Typing          complement(4104..4202)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="6.22e-45"
     Typing          complement(4506..4590)
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="3.03e-37"
     Typing          2..443
                     /name="rep_cluster_2350"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.369"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 agcggtactg acttacacaa aaacggcagc acggttatcc acagaatcag gggataaggc
       61 cggaaagaac atgtgagcaa aagaccaaga acaggaagaa ggccgcgccg caggcgtttt
      121 tccataggct ccgcccccct gacgagcatc acagaaatcg acgctcaagt cagaggtggc
      181 gaaacccgac aggacttaaa gataccagac gtttccccct ggtggctccc tcgtgcgctc
      241 tcctgttccg accctgccgc ttaccggata cctgtccgcc tttctccctt cgggaagcgt
      301 ggcgctttct catagctcac gctgttggta tctcagttcg gtgtaggtcg ttcgctccaa
      361 gctgggctgt gtgcacgaac cccccgttca gcccgactgc tgcgccttat ccggtaacta
      421 tcgtcttgag tccaacccgg taagacacgc cttaacgcca ctggcagcag ccactggtaa
      481 ctgatttaga ggagttagtc ttgaagtcat gcgccagtta aggctaaact gaaagaacag
      541 gttttggtga ctgcgctcct ccaagccagt taccttggtt cttcgagccg caaactcttt
      601 gaacctaaga gaaaaccgcc ccgcaaaggc ggtttttttc ttttacagaa aagagattat
      661 ctatatgaca cgaagatctc aatagcttct tcaaaaaaca cgaaatcaag aagggaatct
      721 aacgtagcaa accgtatgat tctctgcgtt acccgggata tttttagtaa atttagccaa
      781 gttagattct gggttatctt tcatgaggtc aataacagta ccatcattaa aatgctccca
      841 aaacccatca gtacataaaa taacctcttt gttttcatca tttaaatcaa aaactgaatg
      901 attgaaaatt atctcatcag agcagaaatc aacaaatgat gttagataat ttctgtctgg
      961 gcaataacaa acgaggtgag gtattttttt attatcgatt ccattttcct ttaatctttt
     1021 ccaggcaacc gagttatcct ctgttagaag gactccactt ttgttatata cacggcaatc
     1081 tcctgcgtta tatatatgga ggtgcgtatt atttttaaaa aggaaacata ctgcagcctt
     1141 aacaggaact gacttgcatg gttcaataat atctttattc agatcaccag aaaacacgca
     1201 cttatctaac ctaccagaga gaattttcat attccactca gagcaggaat acccatccat
     1261 aataaccatt ccaaacacat cattttgaca atttatcgta gataataagt ctaagttttc
     1321 acatctgtta ccaatatcac taaaactgaa cgctatcatt tgaatatatc ccacggaaga
     1381 ctttcataga aacaggcaac tttttcataa gcatcttcaa aaagaggtaa tgatttaacg
     1441 gtggatgata aatcctgata tcgctgactg gaacgctcga taatttctac atcccttata
     1501 cctttaacgt ttaagagatt atccaattgt ttaccttcac tcttttttaa aagagactcc
     1561 agtattttat acttatcttg ccgagaaaac tcatatttac ctaaaagata attgatatca
     1621 tatatatctt gctctcgatt tctctctcta actttttgtt gcaaaacgga tcgatatttt
     1681 tcagccatca aatcagttaa gctgtaggtc tttacgctat cattgtcatc atcaccatct
     1741 aatgataaaa agtcaaaatc atacgttttt tcgttaaagc taaaatcgat atttatcact
     1801 gaaggtgatt gattagattc aagccttttc attgcagacg cattagaacg atcgcaaaag
     1861 gctatattta tctgtacagt tggaaatgtt ccttgtgcat taggttgaat tttatgagat
     1921 tgaactttac atttaatacc atatcccaat tcagcctcag caacatccat tgagtcatta
     1981 aacctattga aaaaatcccc caagtcaatt tcagaaagtt ttttttcggt agaaaaatca
     2041 atatcctttg tgtatctatc actaccatgc ttaacaccaa gaagagtccc tcccttcata
     2101 accatcattt cattcaaact ctcctctata gaaatagatt taagtattat atgtacagcc
     2161 tggcgcatca acctgtactt cccaccagac tcttcgatcc aattattaat ttctttttcc
     2221 ataagactta accatatcaa cattaataga aataaaccat tcttcatcaa agtaaggtga
     2281 gaatggactc tttggagata gcactttcga actacctctg tatttacccg cctcttgttt
     2341 ccattcgctt atttttttat tattaacccc aataattcta tccaaaatga atccaaccct
     2401 taccttgtca atatgacggc caagcttatc gacttccttt ataatcagag gtgcatattt
     2461 tttaccgtgc tcaataaatg attccaatac atgctcctca ccaccacagt aatcaggccg
     2521 cctggtcata tccataaagg tcttaccgat agatgatacc ctgacagggg aattacgagc
     2581 cttcattggc tcaacataat ttgtttcttg tgtaacgata atttttattc cattgacctc
     2641 agaatttctt ggaaatctag gcatgaattg tttggcttcg tctatatcag gattatcctt
     2701 ttgaaaatca tgatagaact tattcttcca ctgttcggaa cgacatgtcg taaagtggat
     2761 tatcttgggt attttatctg tgatgttatg ccaatccata gcggataaat aggataagta
     2821 tccatatgga tacgtagagc acactatatc attttccgga gaaccatcgt tacctttaac
     2881 aaaaaagacc tcatagaaac cgccaattaa atgggggtaa gcatgatgct tatcgttact
     2941 ttcaactctt gataaaaccc ctgactttaa taattttaat atattttttt caaattcatt
     3001 aggtcctgct ttgttctttc taatttgata tatcctctca ccattatatt ctttttttaa
     3061 ataaaaaagg taaatctgca aagagatttc ttctttggtt atgactggtt ttttatattc
     3121 attcaacaac caagacgtta gcgcttcttc gataagatac atattcaacc ttttcggttt
     3181 agtctctaat agaatatacg tcctaaggac gtatattcta ttagagattg attgtcaaga
     3241 aaaaaataat aacaaacaag catttgccat ttttatattt ttgatatcct ataaaataaa
     3301 tcctaaggat ttattttata ggataataag taggaagtca agaaaaagtt tacttatatc
     3361 accgttttca taacacctca tgcgatcaat tcagcgccgg ttatagttca aatccatgat
     3421 taggacatct gttgctcata aacgatgagc gtaaaagatc atttttcagc gtcatttacc
     3481 ataacgtcgc attacgcgca ccgctaaaac gcgctgaacg cgattctgcc gcgaacaccg
     3541 caaaaagaga tgttctcccc ggggtaaacc ggaaaaatgc gtcaggatcg ctttcagctc
     3601 actgcatagc tatgcatgaa agtgaatgac gatcggtttg ggcgcataca gtgcccatga
     3661 gacacatttt cggacatttt cagttcgtga atccctgact cattgctaca tatctgaaca
     3721 gacaccccta gcagcgcccc caggggcgtc ctgtaaaaaa acacaccgcg ccgctagcag
     3781 cccccctaat ataaaatgat gttttttatg aaaatagtca gtaccacccc taaaaagcgg
     3841 tgttggcgca gctacaacac cgcgccgaca ccgctttttt aaatatcaca aagagagcaa
     3901 gaagaactaa tttgtcataa ctctctattt ataaagaaaa atcagcaaaa aattgttttt
     3961 gcgtggggtg tgggcatttc aggcatgaga acagactcgc gtttttccgg agtatcagcg
     4021 gaattattga ttaagaaaca ctcgacgcag agcgaaattt tatgcaacag cggctgcact
     4081 gcacagggat tatttatcag ttgatatgct gtgccatgat acgtcctaaa aaaacaggac
     4141 aggatgtgca attgtaatac cgtcgcccgc aacgtcttac aattaccacc tggtcagggt
     4201 ccacccgaca cccggtactg acggagaaca acggaaggtg aacaaacagc aacaaactgc
     4261 gctgaatatg gcgcgattta tcaaaagcca gagcctgaca ctgcttgaaa aactggatgc
     4321 tctggatgcc gacgaacagg cggccatgtg cgaacgactg cacgaactcg cggaagaact
     4381 ccagaacagc atccaggttc gctttgagac cgaaagtgaa acaggaacat aacgaagctg
     4441 acggaggcgc tcacggcttg tccgcgagcg ttttcggcag cagacaagcc cgccagggcg
     4501 cgtcagcggg tgtcggggcg aagccctgac ccagtcacgt agcgatagcg gagtgtatac
     4561 tggcttaact atgcggcatc agtgcgaatt gtatgaaaag tgccccatgc cgggtgtgaa
     4621 attccgcaca gatgcgtaag gagaaaatgc gcgtccaggc gcttttccgc ttcctcgctc
     4681 actgactcgc tacgctcggt cgttcggctg cggcg
//
