LOCUS       NZ_OV754013             5752 bp    DNA     circular CON 20-JAN-2024
DEFINITION  Klebsiella pneumoniae isolate BB1541 plasmid BB1541_2, complete
            sequence.
ACCESSION   NZ_OV754013
VERSION     NZ_OV754013.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA12561090
            Sequence Read Archive: ERR8135199, ERR8135748
            Assembly: GCF_928375965.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Delgado-Blas,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2022) UNIVERSIDAD COMPLUTENSE DE MADRID,
            Antimicrobial Resistance Unit (ARU), Av/ Puerta de Hierro, s/n,
            28040 (Madrid), Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/20/2024 03:47:33
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,484
            CDSs (total)                      :: 5,358
            Genes (coding)                    :: 5,234
            CDSs (with protein)               :: 5,234
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 124
            CDSs (without protein)            :: 124
            Pseudo Genes (ambiguous residues) :: 0 of 124
            Pseudo Genes (frameshifted)       :: 52 of 124
            Pseudo Genes (incomplete)         :: 69 of 124
            Pseudo Genes (internal stop)      :: 19 of 124
            Pseudo Genes (multiple problems)  :: 15 of 124
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OV754013.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..5752
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="BB1541"
                     /db_xref="taxon:573"
                     /plasmid="BB1541_2"
     gene            complement(join(5383..5752,1..785))
                     /gene="mobQ"
                     /locus_tag="O0V11_RS27310"
     CDS             complement(join(5383..5752,1..785))
                     /gene="mobQ"
                     /locus_tag="O0V11_RS27310"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MobQ family relaxase"
                     /protein_id="WP_267924749.1"
                     /translation="MAIFHMSAQTISRSKGHSSVAAAAYRHGEKMTDEHTGEIHDYSKK
                     KGVSDGVVLIPDGADKRFLKPEYLWNTIEKSEKRKDAQLAREFNIALPVEMTNEQKKAL
                     AIDFCNENFVKNGMIADIAFHKLDSDNPHFHVMLTTRKLTPDGSGFGQKVREWNSKEQL
                     EGWRKSWADTANEHMQRAGIDARIDHRSLKDQKAELDAIPSPTVEQQAQAISLDRPPTI
                     HRGHSGNPERQERFDALQEVKVSQEAKALNHIGQNTLKPSPPAPASSPTASLPDAKQGG
                     KKTGSAAATVSGSNINLVDETTDKNLHLTEAQREELEEAENKEAAAKKKAYLSGGAGVP
                     AFAQETKIQSKSEFKNKFSKMKNAINKEDEDEENDYKINRPRLK"
                     /name="mobQ"
     gene            1129..1443
                     /locus_tag="O0V11_RS27315"
                     /old_locus_tag="VKR_05377"
     CDS             1129..1443
                     /locus_tag="O0V11_RS27315"
                     /old_locus_tag="VKR_05377"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_267924750.1"
                     /translation="MIGNNNDDYDEYLFDDTVEVSLSCEDDEDYLKEQEQEKKSVLQKM
                     IEYKNENTLFGYLYEIAGIFGFTVVLLIGFILTLPILFIAGVIAFFITMKEKREAKNGV
                     "
                     /name="hypothetical protein"
     gene            1433..1774
                     /locus_tag="O0V11_RS27320"
                     /old_locus_tag="VKR_05378"
     CDS             1433..1774
                     /locus_tag="O0V11_RS27320"
                     /old_locus_tag="VKR_05378"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_267924751.1"
                     /translation="MAFNIEKYNKVKKELEQKANLLNRMEQEMKAEKRKEDAARKIKVG
                     AELIRIVRENNIETLDFANDISLLVGALTNNLILKRIHDQREFLRVEGDKRLNEWKLKN
                     NKKRSKADE"
                     /name="hypothetical protein"
     gene            1767..2180
                     /locus_tag="O0V11_RS27325"
                     /old_locus_tag="VKR_05379"
     CDS             1767..2180
                     /locus_tag="O0V11_RS27325"
                     /old_locus_tag="VKR_05379"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_267924752.1"
                     /translation="MNNIRPNLNPQREGTADMVNRLNFYDTSFTCLHFLMIDFDNDMQE
                     MKRKKDFHPLMLLNKHDRASLDLEILNIIRISLASKMLDIQSDELLGADLYFNKKDELD
                     MGEDARIIAYVFRDFVKQRIEAAIKTIEEDKNI"
                     /name="hypothetical protein"
     gene            2177..2422
                     /locus_tag="O0V11_RS27330"
                     /old_locus_tag="VKR_05380"
     CDS             2177..2422
                     /locus_tag="O0V11_RS27330"
                     /old_locus_tag="VKR_05380"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_052942900.1"
                     /translation="MNIMGFLGFVAKAKPDVDDGGGSLIPAAMGFFICAFLVAIIASVV
                     SSAFRSAKNSADVSINNAKKYHVALIKEQYRRKGGG"
                     /name="hypothetical protein"
     gene            2422..2877
                     /locus_tag="O0V11_RS27335"
     CDS             2422..2877
                     /locus_tag="O0V11_RS27335"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_267924753.1"
                     /translation="MYYLICGLFIAIFFIACLLSVIYAAEIYQWQHYSAYKFKRWLKSG
                     SIKKDEEQEKIKREVKKMTIDNILRLLKKYKIDFDANELVKNDFNIKMKYYKLILAEKE
                     RLKENKRLDEELKQKIKIETDTFDAEKFQKEAEERFKIFMKNRNKNK"
                     /name="hypothetical protein"
     gene            3440..3577
                     /locus_tag="O0V11_RS27340"
     CDS             3440..3577
                     /locus_tag="O0V11_RS27340"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_267924747.1"
                     /translation="MTPQKTAFLSLFFGMRKSGAAENGRKNGTRLHFLAFFEWLDERLK
                     "
                     /name="hypothetical protein"
     gene            3675..5366
                     /locus_tag="O0V11_RS27345"
                     /old_locus_tag="VKR_05382"
     CDS             3675..5366
                     /locus_tag="O0V11_RS27345"
                     /old_locus_tag="VKR_05382"
                     /inference="COORDINATES: protein motif:HMM:NF013603.4"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_267924748.1"
                     /translation="MLSRERVSAIRAKVNRAQSSTNKKSVTLSSVSTNGDRITERKKES
                     FKTANSFIIRGKIEENETLTKRGERSLNCAQQRYIVVVNGKAHTVFTHRCRSRHCQNCQ
                     RIKAFVWQEKMKEIFPDLISKYPNHKYLFITFTVKNPKLKNLKSVLICMSRAYAKMFQR
                     KAFKKWFVGDIRSTEITRGNSGEDEAHPHFHALICVHPSYFQGVNYMSADVWGKNWGEC
                     LEAEFKKEGLEYNAADYPKGFPRVDIRLAKSADRKTDITNQNISEHGEQLINYVLKYSV
                     KGSDLLKNGKADAWFWEFDKQVKNIRMIAASGDIKKSLAKLERDQFDYYKEQEKIEKLI
                     ADDVNFKADKAVFKKEDDYNYYLESKKDKYQYIIEAIEAKAYNYQCYYKALLSDHLLAF
                     RSGIDGIIENFRKINKTKTREDFEVLEAAEQELVKIQCERIERLQFICDALVRVGLYKK
                     MSDFVYMNIHTNEKTVIVKNNIVDILKAAEEKLLNDFKQSFMRLENAKTQDIFNTIVDK
                     VNEKSALIKLVRNEILAAGAYAYDADNLEYIDLETNERLEVIATIE"
                     /name="protein rep"
ORIGIN
        1 gagggcttaa gcgtgttttg tccgatgtgg ttaagtgctt tagcttcttg tgacactttc
       61 acttcttgaa gcgcgtcaaa gcgttcctga cgctctggat tgccgctgtg ccccctgtgt
      121 atggtcggcg gtctgtctaa gctgatagcc tgcgcctgtt gctccacggt gggggagggg
      181 atagcgtcaa gctctgcttt ttggtctttc agtgaacgat gatcaatacg cgcatcgatg
      241 ccagcccttt gcatgtgctc gttcgctgtg tccgcccagc tcttgcgcca gccttcgagc
      301 tgctccttgc tgttccattc cctgactttt tgcccgaacc cggagccgtc cggggttagc
      361 tttcttgtcg ttagcattac gtgaaaatgt gggttgtcgc tatcgagctt atgaaaagct
      421 atatctgcaa tcattccatt ttttacaaag ttctcattac agaaatctat tgctaatgct
      481 tttttttgtt cgtttgtcat ttctacgggg agcgcaatat taaactcgcg tgctaactgc
      541 gcatcttttc ttttttcgct tttttcgata gtgttccaca agtattcagg tttcaaaaat
      601 cttttatctg cgccgtcggg gattaatacc acaccatcag aaactccctt ttttttgctg
      661 tagtcgtgga tctctcctgt atgctcatct gtcatttttt caccgtggcg atacgccgcc
      721 gcagctacgc tactatgtcc ttttgagcgg cttattgttt gggcgctcat atgaaatatt
      781 gccattgttt tttctcctac tattggaagc acatatatta aaaaataagt aaaactattt
      841 ttgcattatc aaaaatcaat aatgtaatat gagcataaag cgagtattca ttattatttt
      901 ttgattgcag taaatcccca tgaaatgggg cgcacacatt cgaagaatgt ataagtgcgc
      961 tattgtagtt tttagcaaaa ctaaaatagc cgctgcacgt aaacctttta tctataaaat
     1021 cgcgctaata aaaatgaaat acatatatcg cgctttactt aaataaataa atatattact
     1081 taaaatatat ataacagaaa tcgcaaaaaa taaaaggggt gatttataat gataggaaat
     1141 aataacgatg attacgacga gtatttattt gacgacactg tagaagtttc tttgagttgt
     1201 gaagatgatg aagattattt aaaagagcag gagcaagaaa aaaaatctgt tttacagaaa
     1261 atgattgagt ataaaaatga aaatactttg tttggttatt tatacgaaat agcggggatt
     1321 tttgggttta ctgtggtttt attaataggt tttattctaa ctctgccgat tttatttatt
     1381 gctggagtta ttgcgttttt tattacaatg aaagaaaaga gagaggcaaa aaatggcgtt
     1441 taatatagaa aaatataata aagtaaaaaa agagcttgag caaaaagcaa acttattaaa
     1501 taggatggag caagagatga aagctgaaaa aaggaaagag gacgctgcgc gtaaaataaa
     1561 agttggcgct gaactaataa gaatagttag agagaataat attgaaactt tagattttgc
     1621 gaatgacatt tctttattgg taggggcttt aactaataat ctaatattaa aaagaataca
     1681 cgatcaacgc gagtttttga gagttgaggg cgataaaaga cttaatgaat ggaagctaaa
     1741 aaacaacaag aaaaggagca aggcggatga ataacataag acctaaccta aaccctcaaa
     1801 gggaaggaac ggcggacatg gtgaaccgtc tgaacttcta tgatacgtct tttacttgct
     1861 tacatttctt aatgatagat tttgataatg acatgcaaga aatgaaaaga aaaaaagatt
     1921 ttcatccgct gatgcttttg aataaacacg atagagcgag tttagattta gagatattaa
     1981 atattattag aatatcactt gctagtaaaa tgttagatat tcagagcgat gaacttttag
     2041 gcgctgattt atattttaat aaaaaagacg agttagacat gggcgaggat gcaagaataa
     2101 tagcttatgt ctttagagac tttgtaaaac aaagaataga agcagcgatt aaaactatcg
     2161 aagaggataa aaatatatga atataatggg ttttttgggt tttgtagcaa aagcaaaacc
     2221 tgacgtggat gatggcggcg gcagtcttat tcccgccgct atggggtttt ttatttgtgc
     2281 ttttttagtt gctattattg cgtcagttgt ttcaagtgct tttcgttctg ctaaaaactc
     2341 tgctgatgtg agtataaata atgcgaaaaa atatcacgta gccttgataa aagagcagta
     2401 tcgaagaaaa gggggcgggt aatgtattat ttaatatgtg gtctatttat agctatattt
     2461 tttattgctt gtttgctttc cgttatatat gccgctgaaa tatatcagtg gcagcattac
     2521 agcgcttaca agtttaaacg ctggttgaaa agtggaagta taaaaaaaga tgaggagcaa
     2581 gaaaaaataa aaagggaagt aaagaaaatg actatagata atattttaag actcctcaag
     2641 aaatacaaaa tagattttga cgctaacgag ttagtgaaaa atgattttaa tattaaaatg
     2701 aaatattaca aacttatatt agccgagaaa gaaagactga aagaaaataa aagattagat
     2761 gaagagttaa aacaaaaaat aaaaatagaa actgatacgt ttgacgctga aaagtttcag
     2821 aaagaagcag aagaacgatt taaaatattc atgaaaaatc gtaataaaaa taaataacct
     2881 caacttgtca aaaaaaatca aggaggttcc gcccgtaggg tggatacctt tatttttatt
     2941 gacaactcac cagataaaaa aaacttgtca tggtgaaagg agagcaaggc gagcctttcg
     3001 cctgttaagc cgcctttacg cccttctctg tgtctctgta tggtaatctc tggccgctgg
     3061 cctcctgccg ttccgggtgg gtttgttaag tggtgggagt gccagccctg catctgagtt
     3121 cgggggcatt tcaccgcccc gcccttgtcc ttgggttttg ggtttgggag tgagcgaagc
     3181 gagtgaccac cttcccttgt ttaataagaa acaaatcaga tttttttaac cccaaaaatc
     3241 ggcctgtacg ccttggtgtg tctggctttg ctcgaaaacc ccgttatcaa tggcggtcaa
     3301 tgaaacgcct gttttttaac caaaaaatac tcgcgccggt tcctgctgaa aataggacgg
     3361 atctgcataa aatcgccctt tcctctcctg tattgggatg tgatctgcaa aaggtttcgg
     3421 ataaacggct gaaggtggga tgacaccaca aaaaaccgcc tttttatccc tgttttttgg
     3481 gatgaggaaa agcggagcgg cggaaaatgg gcgcaaaaat gggacgaggc tgcacttttt
     3541 ggcgtttttt gagtggctgg atgagcggct gaagtgatcg ttttgtatgc aatgcggggg
     3601 taagtgattg acagaaataa aaaacccctt aaagttgaac ttgtcgaggg ttcaaacaat
     3661 caggggtttt ttatatgctt tcaagggaaa gagtaagcgc tatacgcgcg aaagtcaata
     3721 gagcgcaaag ctcaacaaat aaaaaaagcg taacgctttc aagcgtttcg acgaatggcg
     3781 atagaataac agaacgcaaa aaagaaagtt tcaaaacagc gaatagtttt attattcgcg
     3841 gcaagattga agaaaatgaa actctcacta agcgcggtga acgctcttta aactgtgcgc
     3901 aacagcgtta tattgtcgtg gttaatggta aagcacatac cgtatttact caccgctgcc
     3961 gctctcgtca ttgccaaaac tgccagagaa taaaggcttt tgtgtggcaa gaaaaaatga
     4021 aagagatatt ccccgatctc atttctaaat atcccaatca taaatacctg tttattacat
     4081 ttacagttaa aaatccaaag ctaaaaaatc ttaaatctgt attgatttgt atgtctcgcg
     4141 cttacgctaa aatgtttcaa cgtaaagcgt ttaaaaaatg gttcgttggt gatattcgtt
     4201 ctactgaaat aacacgcgga aatagcggag aagatgaagc gcatccgcat tttcacgcgc
     4261 tgatctgcgt tcatccttca tactttcagg gcgtgaacta tatgagcgcg gatgtgtggg
     4321 gcaaaaactg gggcgagtgc ttagaagctg aattcaaaaa agaaggctta gaatataacg
     4381 cggctgatta tccaaagggt ttccctcgcg tagatattcg tcttgctaaa tctgctgata
     4441 gaaaaacaga tattactaat caaaatatca gcgaacacgg cgagcagctt ataaactacg
     4501 ttttaaaata tagcgtgaaa ggttcggact tgctcaagaa cggcaaggct gatgcgtggt
     4561 tctgggagtt cgacaagcaa gtaaaaaata ttagaatgat agcagcttct ggcgatatta
     4621 aaaaatcact tgctaaactt gagcgcgatc agtttgatta ttataaagaa caagaaaaga
     4681 ttgaaaaact aatcgctgat gatgtgaact ttaaagcaga taaagcagta tttaaaaaag
     4741 aagatgatta caactattat ttagaaagta aaaaagataa gtatcaatat atcattgaag
     4801 cgattgaagc taaagcgtat aactatcaat gctattataa agcgttatta tccgatcact
     4861 tattagcttt tagaagcggt attgatggca ttattgaaaa ctttcgcaaa ataaataaaa
     4921 ctaaaacaag agaagatttt gaagtattgg aagcggcgga gcaggagctt gtaaaaatac
     4981 aatgcgaaag aatagagcgt ttacagttta tttgtgatgc tcttgtaaga gttggtttat
     5041 ataagaaaat gtctgatttt gtttatatga atattcatac aaatgaaaaa actgttatcg
     5101 taaaaaataa cattgtagat attttgaaag cagcagaaga aaaactttta aatgatttta
     5161 agcaaagttt catgagactt gagaacgcga aaacgcaaga tatatttaat actatagttg
     5221 ataaagtaaa tgaaaaatca gcactgatta aacttgtaag aaatgagatt ttggcagcgg
     5281 gtgcgtatgc ttatgatgct gataatctcg aatatataga tcttgaaact aacgagcgtt
     5341 tagaagttat agcgactata gaataatagc tcttgcgagc tattatttta aacgtggtct
     5401 atttattttg tagtcgtttt cttcgtcttc atcctcttta ttaatcgcgt ttttcatctt
     5461 gctaaactta tttttaaact cacttttaga ctgtatttta gtttcttgag caaaagcagg
     5521 aacgccagcg ccgccgctga ggtatgcttt tttcttcgct gccgcttctt tattttctgc
     5581 ctcttctaac tcttcgcgct gcgcttccgt taggtgtaga tttttgtctg ttgtttcatc
     5641 tacgagattg atattagatc ctgaaactgt agccgctgct gaacctgttt ttttgcctcc
     5701 ctgtttagca tctggtaaag atgcggtagg ggaggaagca ggagccggag gc
//
