LOCUS       NZ_OV754007             1677 bp    DNA     circular CON 15-NOV-2023
DEFINITION  Klebsiella quasipneumoniae isolate BB1502 plasmid BB1502_9, complete
            sequence.
ACCESSION   NZ_OV754007
VERSION     NZ_OV754007.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA12561088
            Sequence Read Archive: ERR8135197, ERR8135746
            Assembly: GCF_928376045.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Delgado-Blas,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2022) UNIVERSIDAD COMPLUTENSE DE MADRID,
            Antimicrobial Resistance Unit (ARU), Av/ Puerta de Hierro, s/n,
            28040 (Madrid), Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/14/2023 14:56:27
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,742
            CDSs (total)                      :: 5,617
            Genes (coding)                    :: 5,353
            CDSs (with protein)               :: 5,353
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 264
            CDSs (without protein)            :: 264
            Pseudo Genes (ambiguous residues) :: 0 of 264
            Pseudo Genes (frameshifted)       :: 155 of 264
            Pseudo Genes (incomplete)         :: 114 of 264
            Pseudo Genes (internal stop)      :: 36 of 264
            Pseudo Genes (multiple problems)  :: 35 of 264
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OV754007.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1677
                     /organism="Klebsiella quasipneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="BB1502"
                     /db_xref="taxon:1463165"
                     /plasmid="BB1502_9"
     gene            complement(322..711)
                     /gene="pcaC"
                     /locus_tag="O1Y77_RS28680"
                     /old_locus_tag="VKR_05729"
     CDS             complement(322..711)
                     /gene="pcaC"
                     /locus_tag="O1Y77_RS28680"
                     /old_locus_tag="VKR_05729"
                     /EC_number="4.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226751.1"
                     /GO_function="GO:0047575 - 4-carboxymuconolactone
                     decarboxylase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxymuconolactone decarboxylase"
                     /protein_id="WP_096833897.1"
                     /translation="MEDKQRYQDGMAVRRKVLGDAHVDRTLQYLTPLNDEFQDFITRYA
                     WGETWTRPGLDHHTRSMITIAMLIALNREAELKMHLRASFNNGVTRDELKELIMHSALY
                     CGLPAANATMHLAQQVFDDIDAGRG"
                     /name="pcaC"
     gene            complement(701..1468)
                     /gene="pcaD"
                     /locus_tag="O1Y77_RS28685"
                     /old_locus_tag="VKR_05730"
     CDS             complement(701..1468)
                     /gene="pcaD"
                     /locus_tag="O1Y77_RS28685"
                     /old_locus_tag="VKR_05730"
                     /EC_number="3.1.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012968330.1"
                     /GO_function="GO:0047570 - 3-oxoadipate enol-lactonase
                     activity [Evidence IEA]"
                     /GO_process="GO:0042952 - beta-ketoadipate pathway
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipate enol-lactonase"
                     /protein_id="WP_048294806.1"
                     /translation="MNLDYQLDGPEGAPVIVLSNSLGTTRAMWQPQIEALTAHFRVLRY
                     DTHGHGKTTKNGKVTLAQLGEDVIALLDHLNIDRAWFCGISMGGLTGLWLGRFAPERFY
                     GLAVANTAARIGDQASWLSRARAVRQEGMAVVAAGAADRWFTHAFRQKAPEVVEALCHQ
                     LTHTDAEGYAACCEALAAADLRGEAGKIPLPTLIIAGESDPVTTVADANFLQQQIPASQ
                     VVVLPASHLSNIEAAKSFTSALLSFFQGERHGG"
                     /name="pcaD"
     gene            complement(1458..>1676)
                     /locus_tag="O1Y77_RS28690"
                     /pseudo=""
     CDS             complement(1458..>1676)
                     /locus_tag="O1Y77_RS28690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226749.1"
                     /note="Catalyzes the cycloisomerization of
                     cis,cis-muconate; incomplete; partial in the middle of a
                     contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /name="3-carboxy-cis,cis-muconate cycloisomerase"
ORIGIN
        1 cgccataaga gacataacgc agaagatcaa ccgggagcgc aatctgcccg gaattaacat
       61 agacgttgta gccctgccaa acgttgtggc cctgccaaac atagtgcgaa cagggacatt
      121 tccggttgtg ccgttatttc gccgggtggc ggctacgcct tacccggcct acggggtcta
      181 caggcgatct tcgcttccca ggcccggcaa gcgcagcgcc gccgggcaat ctatcggcgt
      241 catacccgcc attatgccgg gtggcggctg cgccttaccc ggcctacaac aactgccggg
      301 caatccgact cggacgacga cttaaccccg cccggcgtcg atgtcgtcaa acacctgctg
      361 cgccagatgc atcgtggcat tggccgccgg cagtccgcaa tacagcgcag agtgcatgat
      421 cagctctttc agctcatcgc gggtcacccc gttgttaaac gacgcgcgta gatgcatctt
      481 cagctccgcc tcgcgattga gagcgatcag catggcaatg gtgatcatgc tgcgggtgtg
      541 gtggtcgagc cccggacgcg tccaggtctc accccaggcg tagcgggtga taaagtcctg
      601 aaactcgtca ttcaacggcg tcagatactg cagggtacgg tcgacgtggg cgtcgcccaa
      661 cactttgcgc cgcaccgcca ttccgtcctg gtagcgctgt ttatcctcca tggcgttctc
      721 cctggaaaaa gctcagcagc gctgaagtaa agcttttcgc cgcctcaatg tttgacagat
      781 gcgatgccgg cagaaccacc acctgggaag cggggatctg ctgctgcaga aaattggcgt
      841 cagcgaccgt ggtgacaggg tcactttccc cggcgatgat taatgtcggc agcgggatct
      901 tccccgcttc gccccgcagg tcggcggcgg ccagcgcctc acagcaggcg gcatagcctt
      961 cggcatcggt atgggtcagc tggtgacaca gggcctccac cacctccggc gccttctggc
     1021 gaaacgcgtg ggtgaaccag cggtccgccg ccccggcggc caccaccgcc attccttcct
     1081 ggcgtaccgc ccgcgcccgc gacagccagc tggcctgatc gccgatgcgc gccgcggtgt
     1141 tggcgacggc cagaccataa aaacgctctg gcgcaaagcg gcccagccac agaccggtca
     1201 gaccgcccat cgaaatcccg cagaaccagg cccggtcgat attcagatga tcgagcagcg
     1261 caattacatc ttcccccagc tgggcgaggg tcactttgcc atttttcgtc gttttaccgt
     1321 ggccgtgggt gtcgtagcgc agcacccgga aatgggcggt tagcgcctca atttgcggct
     1381 gccacatcgc ccgggtggtg cccagcgagt tggagagaac gataaccggc gcaccttccg
     1441 gtccgtcgag ttgataatca agattcatca tgttgctcct gataacgcgc cagcacctgg
     1501 cgcacaaagc attcggcgct gccggtcgcc gttgccgggt ccagcagcgt ggttaaacgt
     1561 tcgcgggaga gatactggct gacctgcgga tccgccgcga gcagatcgac cagcggacag
     1621 aggcggtcca gcgcctgacg gcacagcgcc tcaatatgat gatgcgcctc ggctttg
//
