LOCUS       NZ_OV754002             4783 bp    DNA     circular CON 15-NOV-2023
DEFINITION  Klebsiella quasipneumoniae isolate BB1502 plasmid BB1502_4, complete
            sequence.
ACCESSION   NZ_OV754002
VERSION     NZ_OV754002.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA12561088
            Sequence Read Archive: ERR8135197, ERR8135746
            Assembly: GCF_928376045.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Delgado-Blas,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2022) UNIVERSIDAD COMPLUTENSE DE MADRID,
            Antimicrobial Resistance Unit (ARU), Av/ Puerta de Hierro, s/n,
            28040 (Madrid), Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/14/2023 14:56:27
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,742
            CDSs (total)                      :: 5,617
            Genes (coding)                    :: 5,353
            CDSs (with protein)               :: 5,353
            Genes (RNA)                       :: 125
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 85
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 264
            CDSs (without protein)            :: 264
            Pseudo Genes (ambiguous residues) :: 0 of 264
            Pseudo Genes (frameshifted)       :: 155 of 264
            Pseudo Genes (incomplete)         :: 114 of 264
            Pseudo Genes (internal stop)      :: 36 of 264
            Pseudo Genes (multiple problems)  :: 35 of 264
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OV754002.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4783
                     /organism="Klebsiella quasipneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="BB1502"
                     /db_xref="taxon:1463165"
                     /plasmid="BB1502_4"
     gene            590..913
                     /locus_tag="O1Y77_RS28535"
                     /old_locus_tag="VKR_05700"
     CDS             590..913
                     /locus_tag="O1Y77_RS28535"
                     /old_locus_tag="VKR_05700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="WP_163063187.1"
                     /translation="MLTMWVTEGEHRRLLERCDGRPLAAWMRQTCLDEKPARTGKLPSL
                     SPALLRQLAGMGNNLNQIARRVNAGGGTGHDRVQIVAALMAIDAGLERLRHAVLEKGTD
                     DDR"
                     /name="MobC family plasmid mobilization relaxosome protein"
     gene            1122..>1556
                     /locus_tag="O1Y77_RS28540"
                     /pseudo=""
     CDS             1122..>1556
                     /locus_tag="O1Y77_RS28540"
                     /inference="COORDINATES: protein motif:HMM:NF015397.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /name="relaxase/mobilization nuclease domain-containing
                     protein"
     gene            1591..2082
                     /locus_tag="O1Y77_RS28545"
                     /old_locus_tag="VKR_05701"
     CDS             1591..2082
                     /locus_tag="O1Y77_RS28545"
                     /old_locus_tag="VKR_05701"
                     /inference="COORDINATES: protein motif:HMM:NF016710.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeB family mobilization protein"
                     /protein_id="WP_032629998.1"
                     /translation="MSSLLTLAKDLEQQSKAQQQSTGEMLKAAFSEHEQSVRAELSASA
                     RRISDAILAHEQSMSEAMEKNRRSVLRTAGRTWFTILMVSALLIGTSGSILWWQGQQIT
                     DNYTHLRQQEDTLAKMTARTWGVRYQESSDGRRFLILPPGMQTEAIPYDGTTWIRLKQE
                     "
                     /name="MbeB family mobilization protein"
     gene            2089..2304
                     /locus_tag="O1Y77_RS28550"
                     /old_locus_tag="VKR_05702"
     CDS             2089..2304
                     /locus_tag="O1Y77_RS28550"
                     /old_locus_tag="VKR_05702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
                     /protein_id="WP_000137422.1"
                     /translation="MTELEKQLLSALEQLQQDYSQRLDEWESAFAEWRSMCGLMQRENA
                     VLNERVSDLSTQVLSLSEQLRRLSGN"
                     /name="MbeD family mobilization/exclusion protein"
     gene            complement(2975..3217)
                     /locus_tag="O1Y77_RS28555"
                     /old_locus_tag="VKR_05704"
     CDS             complement(2975..3217)
                     /locus_tag="O1Y77_RS28555"
                     /old_locus_tag="VKR_05704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_023316026.1"
                     /translation="MALVRSGNKSKIFEADTKFNSVFDTEYKPGETCEYEGIYKCTGCG
                     KEVTIAGGKTIPPQNHHQHTPAQGNIRWQLFVYAQ"
                     /name="hypothetical protein"
     gene            3404..3721
                     /locus_tag="O1Y77_RS28560"
     CDS             3404..3721
                     /locus_tag="O1Y77_RS28560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="WP_023316025.1"
                     /translation="MQQDHEHDDCRIQFRDDWLYQFYKYGKANRKIPTAISASLGRKLD
                     MLNAADKVGDLRSPPGNRFENLNPPLTGYSSIRVNEKYRLIFKWGENGVEDLYLDPHDY
                     R"
                     /name="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            3924..4280
                     /locus_tag="O1Y77_RS28565"
                     /old_locus_tag="VKR_05705"
     CDS             3924..4280
                     /locus_tag="O1Y77_RS28565"
                     /old_locus_tag="VKR_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000075993.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="WP_023316024.1"
                     /translation="MSQATRKPSTVGDIILYEYLEPSGLKINDLAEMLNVHRNSASALV
                     NNNRKLSTDMAFRLAKAFDTTAKFWLNIQQSVDLWEVTSSPRLQEEIDRVIPAHEIIER
                     KHIVDSSEKKHAIA"
                     /name="HigA family addiction module antitoxin"
     gene            complement(<4600..4722)
                     /locus_tag="O1Y77_RS28570"
                     /pseudo=""
     CDS             complement(<4600..4722)
                     /locus_tag="O1Y77_RS28570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487656.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /name="replication initiation protein"
     Typing          302..475
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.0"
                     /coverage="100.0"
                     /evalue="1.21e-74"
     Typing          complement(3..378)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="91.293"
                     /coverage="90.0"
                     /evalue="1.9999999999999997e-142"
     Typing          complement(4380..4780)
                     /name="rep_cluster_2358"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="85.61"
                     /coverage="99.0"
                     /evalue="3.89e-114"
     Typing          591..907
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="92.453"
                     /coverage="99.0"
                     /evalue="1.45e-59"
     Typing          904..2396
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="94.2"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 acgcggccat aacagcggaa tgacaccggt aaaccgaaag gcaggaacag gagagcgcac
       61 gagggagcca tcagggggaa acgcctggta tctttatagt cctgtcgggt ttcgccacca
      121 ctgatttgag cgtcagattc tgtgatgctc gtcagggggg cggagcctat ggaaaaccgg
      181 ctctgtcgtg gccttatcgc ttccctgtta agtttcttcc tggcatcttc caggaaattt
      241 ccgccccgtt cgtaagcccg caccgctcgc cgcagccgaa cgaccgagcg cagcgagtca
      301 gtgagcgagg aagcggaata tatcctgtat cgcatattct gctgacgcgc cgttgccgcc
      361 ttttttctcc tgccacatga agcacttcac tgatttccgt atccgtgcca acatattaag
      421 ccagtataca ctccgctagc gctacgtgac tggttcaggg ctgcgccccg aaacccgcca
      481 aaagccactg acgcgcctgc ggcttgtcca accccgcgcc gaccgggaaa ggctttcccg
      541 cccgtcccgg cgttatcagg aggccggttt gtcagagaaa cggaacaaga tgctcaccat
      601 gtgggtgacg gagggcgagc accggcggct gcttgagcgc tgcgacggca ggccgctggc
      661 ggcgtggatg cggcagacct gcctggacga aaagcctgcg cgcaccggaa agctcccctc
      721 actctcgccg gcgctgctgc gccagcttgc cggtatgggc aataacctga accagatagc
      781 ccgccgtgtt aacgccggcg gcggcaccgg ccatgacagg gtacagattg tggcggcgct
      841 gatggccatc gatgccgggc ttgagcggct gcggcacgcc gttcttgaga aaggaacgga
      901 cgatgatcgt taaatttcat ccacgcggtc gcggcggtgg cgccgggccg gtggactatc
      961 tgctgggtaa agaccggcag cgtgaaggcg ccagcgtcct gcaggggaag ccggaagaag
     1021 tccgggagct gattgacgcg tcgccttacg tgaagaaata cacctccggc gtactgtcgt
     1081 ttgcggaggc cgatctgcct cccggccagc gggaaaaact gatggccagc ttcgagcggg
     1141 ttctgatgcc cggactcgat aaagatcagt acagcattct gtgggtggag cacgcggaca
     1201 aggggcgtct ggagctgaac tttctgatcc ccaataccga actgctgacc ggcaggcggc
     1261 tccagccgta ctacgaccgc gccgaccggc cgcgcatcga tgcctggcag accatcgtga
     1321 acggcagact ggggctgcat gacccgaacg cgccggaaaa ccgccgggcg ctggtcacgc
     1381 cgtccggact gccgaaaacg aagcaggagg ccactgaagc catcacgcgc ggactgctga
     1441 cccttgcttc gtccggggag ctgaaaaacc gtcaggacgt cactgaggcg ctggaacggt
     1501 caggttttga ggtggtgcgc accacgaaaa gcagtatcag cattgccgac ccggacgggg
     1561 ggcgaaacat ccgactgaag ggagccatct atgagcagtc ttttaacgct ggcgaaggac
     1621 ttagagcagc aatcgaaagc gcagcagcag agtaccggcg agatgctgaa agccgcattc
     1681 agcgagcacg agcagtctgt cagagcggaa ctgagcgcaa gcgcgaggag aatcagcgac
     1741 gccatcctcg cacacgagca gagtatgagc gaggcgatgg agaaaaaccg gcggagcgta
     1801 ctgcggactg ccgggcggac atggttcacc atcctgatgg tgtcagcgct gctgatcggc
     1861 acgagcggga gcatactgtg gtggcagggg cagcagataa ccgacaatta cacgcatctt
     1921 cgtcagcagg aagataccct ggcgaaaatg actgcccgga cgtggggagt gcgctatcag
     1981 gagagcagcg acggccggag gtttcttatc ctgccgcccg ggatgcaaac cgaagccatc
     2041 ccctacgacg ggacgacatg gatccgcctg aaacaggagt agcggaaaat gacagagctg
     2101 gaaaagcagt tgctgagcgc attagagcag ctacagcagg actactcgca aaggctggac
     2161 gaatgggaga gcgccttcgc ggaatggcgg agcatgtgtg ggcttatgca acgggagaac
     2221 gcggtgctga acgagcgcgt gtcggacttg agcacgcagg tgctgagttt aagcgagcag
     2281 ctgcgccgct tgtccgggaa ctgaatgcca tcgagctccg gcagagggag aatgagtatc
     2341 agaaaacact ggagctggag cgccagccgc agaaaaccta ccgcgggccg acactttaaa
     2401 ccatccaggc agctgacaac ccgcacgaag aggggctctt atttctcccg ctaaataggt
     2461 tcgtgatcaa aaaggtcacg acttattcag gagcgggaaa tgaagctgtt aaatctcatt
     2521 gaatcattgc ttaactgcct gtatctggcg gcggagctgt gggactggct ggagaagcat
     2581 ttgtcggttt ttaaggcatt ggcgcggatt ttagtgtgac tttaacatcc atgcatctgg
     2641 ctgcatgact atgcaccagt gtaatattca gcggctgcgt ttctggtgtt ttttcgttat
     2701 gtctgtcgcc actttctcgc gtctggcacc ggaaacgcag ccaaccccgt ttcagcggtg
     2761 cgcccaacgg atgttatggt aaatcagtat cagctgcaga tataaaaaag ccgccaggct
     2821 ggcggcttgc tgttattttc gtggctttcc tgcatctgag cgttttcctc tgacccttcc
     2881 gtcattgtta cggtcacgag gttgagttcc gccgcctggt ttaggaacga caacgtgtgg
     2941 gttgagtggt cgacgatctg ccattttcta tacctcactg agcataaaca aacaattgcc
     3001 aacgaatgtt cccttgcgcg ggggtatgtt ggtggtggtt ttgtggtggg attgttttcc
     3061 cgcctgcgat agttacttct ttaccgcaac cggtacattt ataaatccct tcatattcac
     3121 atgtttctcc cggcttatat tcagtgtcaa aaaccgagtt aaacttcgta tctgcttcaa
     3181 aaatcttgct tttgtttcct gagcgaacaa gagccatgca acctccaaat tatcatttat
     3241 tttgcacacc tgcactgtgc atgagtgcat tctacagcat agccattgat tgcacaagtg
     3301 cactgtgctg ttgtgcattt gatatgtttg ctgtactata tcggaggtaa gaaggtgatc
     3361 gaaaaaattg ccaagttgcg gcaaaaattg aggtaaaaga aaaatgcagc aagatcatga
     3421 acatgatgat tgccgcattc agtttcgaga cgattggcta taccagtttt acaaatatgg
     3481 taaagccaat cgaaagattc caactgcgat tagtgcttca ttaggtcgca agctggatat
     3541 gctgaatgct gctgataaag ttggagattt gcggtctccc ccgggaaacc gatttgagaa
     3601 tctcaaccct ccattgacag ggtattcatc catacgggtg aatgagaagt accgcttgat
     3661 atttaagtgg ggtgaaaacg gagtcgagga tttgtatctc gatccacatg attaccgata
     3721 gataacaggt cgtggctgtt atcttataaa acaagtaggt gaggcgttcc ctcacctaca
     3781 ttaaaatgtc attacaaata atgattaata aaaaaaatga cgtgactata tttaagataa
     3841 ttactcatcg ctacagctgg taatagacga aatacttatc ttcctcatct aacagagaga
     3901 agtaaaaaat ttaggagtaa agcatgtccc aagcaactag aaaaccatca actgtagggg
     3961 atattattct ttatgaatat ctcgaaccaa gtggtttaaa aatcaatgac ttggctgaaa
     4021 tgttgaatgt gcatagaaac tctgccagtg ctttagttaa caataataga aagctgtcta
     4081 ccgatatggc ttttaggttg gctaaagcct tcgataccac tgcaaagttc tggctaaata
     4141 tacagcagtc tgttgattta tgggaggtta ctagtagccc tcgattgcaa gaagaaatag
     4201 acagagtgat tcccgctcat gaaatcatag aaaggaaaca cattgttgat agttctgaga
     4261 agaaacatgc tattgcatga ttttttttaa aaaaatataa gttatccctc aaaaagaagg
     4321 cttctataac tagaagcctt ctttttgagg gataaaaacg ctcatgttaa ctttcttctt
     4381 acgatcttct tgagatccgt gctctgtacg cgtaatctct tgctctgtaa acgaaaaaac
     4441 cgcctgggga ggcggttttt cgaaggttaa gtcagttggg gaactgctta acctggtaac
     4501 tggcttcagc agagcgcaga taccaaatac tgtccttcca gtgtagccgt agttaggcca
     4561 ccacttcaag aactctgtag caccgcctac atacctcgct ctgctaatcc tgttaccagt
     4621 ggctgctgcc agtggcgttt tgtcgtgtct ttccgggttg gactcaagtc gatagttacc
     4681 ggaacaggcg cagcggtcgg actgaacggg gggttcgtgc atacagtcca gcttggagcg
     4741 aactgcctac ccggaaccga gtgtcaggcg tggaatgaga caa
//
