LOCUS       NZ_OV753996             2317 bp    DNA     circular CON 15-NOV-2023
DEFINITION  Klebsiella pneumoniae isolate BB1539 plasmid BB1539_3, complete
            sequence.
ACCESSION   NZ_OV753996
VERSION     NZ_OV753996.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA12561089
            Sequence Read Archive: ERR8135198, ERR8135747
            Assembly: GCF_928376025.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella pneumoniae
  ORGANISM  Klebsiella pneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Delgado-Blas,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2022) UNIVERSIDAD COMPLUTENSE DE MADRID,
            Antimicrobial Resistance Unit (ARU), Av/ Puerta de Hierro, s/n,
            28040 (Madrid), Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/14/2023 14:40:05
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,486
            CDSs (total)                      :: 5,360
            Genes (coding)                    :: 5,240
            CDSs (with protein)               :: 5,240
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 88
            ncRNAs                            :: 13
            Pseudo Genes (total)              :: 120
            CDSs (without protein)            :: 120
            Pseudo Genes (ambiguous residues) :: 0 of 120
            Pseudo Genes (frameshifted)       :: 48 of 120
            Pseudo Genes (incomplete)         :: 69 of 120
            Pseudo Genes (internal stop)      :: 19 of 120
            Pseudo Genes (multiple problems)  :: 15 of 120
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OV753996.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Klebsiella pneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="BB1539"
                     /db_xref="taxon:573"
                     /plasmid="BB1539_3"
     gene            156..269
                     /locus_tag="O1Y99_RS27420"
     CDS             156..269
                     /locus_tag="O1Y99_RS27420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="WP_071789001.1"
                     /translation="MHEPPVQSDCCALSGNYRLESNPVRHAKAPLAAATGN"
                     /name="replication initiation protein"
     gene            complement(650..1186)
                     /locus_tag="O1Y99_RS27425"
                     /old_locus_tag="VKR_05383"
     CDS             complement(650..1186)
                     /locus_tag="O1Y99_RS27425"
                     /old_locus_tag="VKR_05383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002069891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_023150440.1"
                     /translation="MKKVYTAIILIVLLCGGVLSANYIFLQRHMNEVLKEDPRNDGISV
                     WVYYKWFVNSSEINYDLRSVSAENSSLDVSRVMLQFAEKVKDYDFSKVYLSYRGKDKFY
                     LKGEYFKTLGQEYGIQNPVYTLRTIPENVYMLNGERAYSVWEGGLLGVMGKQMEDLSDF
                     SKAWYLDDFIKSMSD"
                     /name="hypothetical protein"
     gene            complement(1475..1711)
                     /locus_tag="O1Y99_RS27430"
                     /old_locus_tag="VKR_05384"
     CDS             complement(1475..1711)
                     /locus_tag="O1Y99_RS27430"
                     /old_locus_tag="VKR_05384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001676031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_016947370.1"
                     /translation="MKRLINLTPAEKRFLDDAVAAAERASGKKLNQPNRHIVLNRARAQ
                     IESQRQAERQRSAREEERQQAEFTWSRPRAPRR"
                     /name="hypothetical protein"
     Typing          complement(1942..2120)
                     /name="MOB_unknown"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="84.066"
                     /coverage="83.0"
                     /evalue="3.53e-41"
     Typing          2..471
                     /name="rep_cluster_2358"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="84.97"
                     /coverage="94.0"
                     /evalue="2.28e-131"
     Typing          2097..2315
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="85.135"
                     /coverage="93.0"
                     /evalue="1.1599999999999999e-54"
ORIGIN
        1 aagatcccag gcgtttcccc ctggtggctc cctcgtgcgc tctcctgttc ctgcctttcg
       61 gtttaccggt gtcattccgc tgttatggcc gcgtttatct cattccacgc ctgacactca
      121 gttccgggta ggcagttcgc tccaagctgg actgtatgca cgaacccccc gttcagtccg
      181 actgctgcgc cttatccggt aactatcgtc ttgagtccaa cccggtaaga catgcaaaag
      241 cgccactggc agcagccact ggtaactgat ttagaggaga tagtcttgaa gtcatgcgcc
      301 agttaaggct aaactaaacg aacagttttg gtgactgcgc tcctctaact agccagttac
      361 ctcggttcaa agagttgctg ctctgagaac cttcgagaaa accgccttgc tgggcggttt
      421 tttcgtttac agagcaagag attacgacgc aacagaaagg atctcaagaa gttccttgct
      481 gtattgctac tatcctagag atctgaccca ttaggggcat tatcagatga cggccttgta
      541 atccacgggg agcaggtcac acatctaaag catctacgag taaaaacacc ccagtgacca
      601 atgagcgatt tgcgtgagct aatcgtcaat gtatactgat cgcttcaaat taatcgctca
      661 tgcttttaat gaaatcatct aagtaccaag ccttagagaa atcactaaga tcttccatct
      721 gttttcccat tacacccaga agcccaccct cccaaacact ataagctctc tctccattta
      781 acatatacac gttttccgga attgttctta atgtatatac ggggttttga ataccatatt
      841 cctgcccaag agttttaaaa tactctcctt ttaagtaaaa cttatctttc cctctgtaac
      901 taagataaac cttactaaaa tcataatctt tcactttttc agcaaattgc agcatcaccc
      961 tactaacatc cagtgaacta ttttctgcag aaacagaacg aaggtcataa ttaatctcgg
     1021 aagagtttac aaaccactta taataaaccc aaacgctaat accatcattc cttggatctt
     1081 ctttcagaac ctcattcatg tgcctttgaa gaaaaatgta gttggcagat aaaacaccac
     1141 cacataagag tactattaat atgattgctg tatatacttt tttcatttct ataatccatc
     1201 tcaactgctc taaagtttac cctgagattt ttaagctaag gtgccataag ttagcaagga
     1261 attaagcatc gatttaccat aacgtcttct tacgcgcacc gcgaaaacgg cctcagggcg
     1321 tttctgcgcc ttcagccaca aaagagcacg tcttaccccc agaaaaccgc ccggaatcgc
     1381 tctggtgagt tttacggtgg cgaatgacta tgcaccggag tgaataccac gctgtttcgc
     1441 cctgaactcc ccacaaaacc gacgaaagtg gcaatcagcg acgcggcgcc cgcggacgcg
     1501 accaggtaaa ttccgcctgc tgccgctcct cctcacgcgc agatcgctgc cgttctgcct
     1561 ggcgctgcga ttcgatctgt gcacgagccc tgttaaggac aatgtgcctg ttgggctgat
     1621 tcagcttctt gcctgacgct ctctcagcgg cggcaacagc atcgtcgaga aatcttttct
     1681 cggcaggcgt caggtttatc agtcgtttca tggcgttctc cggtcagaat aactctgcac
     1741 agtctgccag acacggcgaa cctcatgaag aacctgcagc cgggaacggc cctgagaaac
     1801 ggtgaacggg aacggatttt aatccggtgc cgtgaagcgt tggcggggta tcggggcgca
     1861 gccctgagat atcgttttgg tgccggcatc atgatggcgg tactccaaaa acacatcttg
     1921 tcccgctttc agtttctgaa tttgcgggtt ccgggcgcag cgccggacca gtcacgtagc
     1981 gctagcggag tgtatactgg cttaatatgt tagttgggcg tggtggctca gggaagtgct
     2041 tcatgtggca ggggaaaaat gcggctgcgg tgcgtaagtg caaaatgctg atgatggtga
     2101 aatgacgcct cctcgctcac tcggtcgcta cgctcctgcc gtgagactgc ggcgggcgtt
     2161 acctgctcac gaatgacgag gtaacgaaat gaagctgagg tcaagaaggg cccgaaaaag
     2221 gatgcggcgc tgccgttttt ccataggctc cgcccccctg acaagcatca caaaatctga
     2281 cgctcaaatc agtggcggcg aaacccgaca ggactta
//
