LOCUS       NZ_OV753641             3512 bp    DNA     circular CON 14-JAN-2024
DEFINITION  Klebsiella quasipneumoniae isolate BB1501 plasmid BB1501_6, complete
            sequence.
ACCESSION   NZ_OV753641
VERSION     NZ_OV753641.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA12561087
            Sequence Read Archive: ERR8135196, ERR8135745
            Assembly: GCF_928371855.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Delgado-Blas,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2022) UNIVERSIDAD COMPLUTENSE DE MADRID,
            Antimicrobial Resistance Unit (ARU), Av/ Puerta de Hierro, s/n,
            28040 (Madrid), Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/14/2024 03:36:52
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,734
            CDSs (total)                      :: 5,608
            Genes (coding)                    :: 5,392
            CDSs (with protein)               :: 5,392
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 216
            CDSs (without protein)            :: 216
            Pseudo Genes (ambiguous residues) :: 0 of 216
            Pseudo Genes (frameshifted)       :: 114 of 216
            Pseudo Genes (incomplete)         :: 101 of 216
            Pseudo Genes (internal stop)      :: 41 of 216
            Pseudo Genes (multiple problems)  :: 35 of 216
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OV753641.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..3512
                     /organism="Klebsiella quasipneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="BB1501"
                     /db_xref="taxon:1463165"
                     /plasmid="BB1501_6"
     gene            complement(93..395)
                     /locus_tag="OZE11_RS28530"
                     /old_locus_tag="VKR_05689"
     CDS             complement(93..395)
                     /locus_tag="OZE11_RS28530"
                     /old_locus_tag="VKR_05689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006326557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3892 domain-containing protein"
                     /protein_id="WP_023317863.1"
                     /translation="MVDFYISAIKMDSAGQHIEFVKVHKINRDGSWNTAGSISSRKFIS
                     ELISMGKASFMTVVKNSSTGKWNLGAKVEAMNDGYITTDPNKTKLDNLGNLPKFV"
                     /name="DUF3892 domain-containing protein"
     gene            complement(459..752)
                     /locus_tag="OZE11_RS28535"
                     /old_locus_tag="VKR_05690"
     CDS             complement(459..752)
                     /locus_tag="OZE11_RS28535"
                     /old_locus_tag="VKR_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000609279.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="WP_023317864.1"
                     /translation="MINLYDPVHPGEFIREMFMEPFEIPAAELADKLDVSQSTLSRLLN
                     GKTDLSYEMALRLSKVVGRSAESWVNMQTQFSLSKSRKSLAAELEHLHPMFP"
                     /name="HigA family addiction module antitoxin"
     gene            1090..1371
                     /locus_tag="OZE11_RS28540"
     CDS             1090..1371
                     /locus_tag="OZE11_RS28540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000594459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="WP_032440460.1"
                     /translation="MIKNIKHKGLRSFAEEGSTAGIQPSMAKRLRMILTTLSTATCIQD
                     VVDVRALGCHPLKGERKGEYSVEVNGNWRVVFKVEEPNVLDVDLEDYH"
                     /name="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(1829..1975)
                     /locus_tag="OZE11_RS28545"
     CDS             complement(1829..1975)
                     /locus_tag="OZE11_RS28545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001717510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="WP_073545459.1"
                     /translation="MHEPPVQSDCCTLSGNYHLESNPVRHAQAPLAAATGKKVYKRLLI
                     QSS"
                     /name="replication initiation protein"
     gene            2391..2582
                     /locus_tag="OZE11_RS28550"
                     /old_locus_tag="VKR_05692"
     CDS             2391..2582
                     /locus_tag="OZE11_RS28550"
                     /old_locus_tag="VKR_05692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="WP_023317861.1"
                     /translation="MTKQQKTALNMAKFIQNQSLLLLEKLNELDLDVEADLCEKLHDDA
                     EHLFRTLSSRLDALQDGY"
                     /name="Rop family plasmid primer RNA-binding protein"
     gene            2582..2983
                     /locus_tag="OZE11_RS28555"
                     /old_locus_tag="VKR_05693"
     CDS             2582..2983
                     /locus_tag="OZE11_RS28555"
                     /old_locus_tag="VKR_05693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310048.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="WP_023317862.1"
                     /translation="MARVSISEAARLTGKSRTTLHRLIKEGDLSTCSGERNAKMVDTSE
                     LLRVFGPFEQPKGEHHSGQVSEQRDTASADQGEQVIRHLKQEIEHLNTLLLSKDSHIDS
                     LKQAMLLLENHQAKLTESPAPWWKFWKKS"
                     /name="helix-turn-helix domain-containing protein"
     Typing          complement(1867..2270)
                     /name="ColRNAI_rep_cluster_1987"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="95.309"
                     /coverage="99.0"
                     /evalue="0.0"
ORIGIN
        1 atgaggccgt tttagcggtg cgtacaatta tgactttatg ttaaatcatt agggagggga
       61 ttctgctgga acttagtgga tgttattgca tatcagacaa atttcggcag atttcccaag
      121 ttatcgagtt tagttttgtt tggatctgtg gttatgtagc catcgttcat cgcttccact
      181 ttggctccta ggttccactt accagtagag ctgttcttta caactgtcat aaagctggct
      241 tttcccatgc tgatcagctc gctgatgaat ttgcgagagc tgattgagcc ggcagtgttc
      301 catgagccat ctcggtttat tttatgaact tttacgaatt cgatgtgctg accagcactg
      361 tccattttga ttgctgagat atagaaatct accatggttg cctcctgatg gctgctgggt
      421 gttttacgta acaaaagccc gcgttctgcg ggcttttttc atggaaacat tggatgcaag
      481 tgttccagct ctgccgctaa agatttgcga ctttttgaca ggctgaattg ggtctgcatg
      541 tttacccacg actctgcaga gcggcctacg accttcgaca atctaagtgc catttcatag
      601 cttaagtctg ttttcccatt taacagtcta cttaaggtag actgggatac atcaagttta
      661 tcggctaact ctgcggcagg tatttcgaac ggttccatga acatttctct gataaactca
      721 ccaggatgaa caggatcgta aagatttatc atgccttcct ctgtttgttt tgtatttgat
      781 tatacaaaaa aaattactgc ctttcagtat gcgcattgca ctatgtgcaa gttcatgata
      841 ttgacaaaaa aagcagtcag ctttaggata ctcgttggag tcaaagctac tgcgtatgta
      901 tgggctttta tggccttttc aaggcgcagt attttaccct taggattcgt tgaagtcaaa
      961 tgaggtgatt gacctcaaga acaaacttac gtcaattgtt ttaataaagc aagggggcaa
     1021 aatggaacta attaaaatga ttttaaaata tagatacagg tatagacgaa aaaaatatgg
     1081 ggattgtaga tgataaaaaa cataaaacat aaaggactta ggagctttgc tgaagaaggt
     1141 agcaccgccg gtattcagcc cagtatggcg aaaagacttc gcatgatttt gactacgcta
     1201 agcacagcaa cttgcattca agacgttgtt gacgttaggg cgttagggtg ccacccccta
     1261 aagggggagc gtaaaggcga gtattccgtt gaagttaatg ggaactggcg ggtagttttc
     1321 aaggttgagg aaccaaacgt cttagacgtt gatcttgaag attatcatta gttatcaata
     1381 agtaagttgc taatccatcc aagtgaaagt acggatggat tagggacttt attaaaaaag
     1441 taacctctgg agaaagtatg agatccttta tggttttatt gttcccgttg attagcgtaa
     1501 ctattgctgg agtcctagct tttcgtggta ttgatggctg gggatggttc ttgttagctg
     1561 ctgtactttg tgcaggggct gatactgtcc agaagcatgt gtctaccaat aaaaaggagc
     1621 ctgctggtga gtgagctgtc ttggttcttc cttgactgct ttgaatgata aagcgtatct
     1681 tactcgccga gacgaaaaaa ccgcctgggg aggcggtttt ttcgagggtt cagtaagttg
     1741 gggaacttct gaaccgtggt aacagggtgt acaagaccgc tgaaaccaaa ttctgtcctt
     1801 tcagtttagc cgtagttggg ctgagacttc aagaactctg tatcagtaat ctcttgtaca
     1861 ccttcttacc agtggctgct gccagtggcg cttgtgcgtg tcttaccggg ttggactcaa
     1921 gatgatagtt accggataag gtgcagcagt cggactgaac ggggggttcg tgcatacagt
     1981 ccagcttgga gcgaactgcc tacccggaac tgagtgtctg gcgtggaatg agataaacgc
     2041 ggccataaca gcggaatgac accggtaaac cgaaaggcag gaacaggaga gcgcacgagg
     2101 gagccatcag ggggaaactc ctgatatctt tatagtcctg tcgggtttcg ccaccactga
     2161 tttgagcgtc cgtttctgtg atgcttgtca ggggggcgga gcctatggaa aaacggccgc
     2221 tttgcggcct ttccttttcc ccgctacgcg accgctcggt tttctcgagc ttttacacgc
     2281 atgctcctgc cgctcgccgc agccgaacgg caggagcata gcgactgagt gagcgaggaa
     2341 gcggaaaaga gaacatccct acactgagca ctgacgctct gaggcctctt atgacgaaac
     2401 aacagaaaac agcgctgaac atggctaaat tcatccagaa tcagtctctg ctcctgctgg
     2461 agaagcttaa cgagcttgat ctcgatgtcg aggccgacct ttgtgagaaa ctccacgatg
     2521 atgcggagca tcttttccgt acactgtcct cgagactgga tgcattacag gatggttact
     2581 gatggccaga gtgtctatta gtgaggctgc ccgactgacg ggtaagagta gaacaacact
     2641 gcacaggtta attaaagaag gtgacctgtc cacctgtagc ggtgagcgta atgcaaaaat
     2701 ggtagatact tcagagcttt tacgtgtctt tggtcccttt gagcaaccga agggtgaaca
     2761 ccattctgga caggtctctg aacagcgtga tacagcctct gctgaccagg gtgaacaggt
     2821 gattcgtcat ctgaaacagg agattgaaca cctgaatacc ttacttttgt ccaaggattc
     2881 gcacattgac agcctgaaac aggccatgct ccttcttgaa aatcaccagg caaaattaac
     2941 tgaatccccg gcgccatggt ggaaattctg gaaaaaatcc tgaccgcgtc atgcttcagt
     3001 tttcctctcc ggtcattccg gggagttcct gaaccttccc aaaaatcgcc agatctctga
     3061 gcactcctca ccacgaaaaa tacccacacc ccacgcaaaa ttaaaatttt gcagatagac
     3121 ctttagtttc aattagttat ctattgtaaa ttacgcaatt ttattttttg taaggtgaat
     3181 ccgagtcgtg ggcgactcta tggcgaatcg ctgacgaatt gcccacgatt catatgtgaa
     3241 tcacgcttta ttatcatatg gttatgatga attgactctt gattcaattc atcactttgg
     3301 gtgttttttg ttcatggtga ctcttgattc aattcacgag tcgaatcgcc ggtgaatcgt
     3361 gtggtgagtc gtccggcgac ttgccataac gtgattgccg gccgtcgacg aacccgattc
     3421 ctgaacgtgc tgaaaacggg ttttccggct gcgccggcaa cggctcacga ccacgcaata
     3481 aattgcgtcc ccgttcaccg ttttcggatg ga
//
