LOCUS       NZ_OV753638             4783 bp    DNA     circular CON 14-JAN-2024
DEFINITION  Klebsiella quasipneumoniae isolate BB1501 plasmid BB1501_3, complete
            sequence.
ACCESSION   NZ_OV753638
VERSION     NZ_OV753638.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA12561087
            Sequence Read Archive: ERR8135196, ERR8135745
            Assembly: GCF_928371855.1
KEYWORDS    RefSeq.
SOURCE      Klebsiella quasipneumoniae
  ORGANISM  Klebsiella quasipneumoniae
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella.
REFERENCE   1
  AUTHORS   Delgado-Blas,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JAN-2022) UNIVERSIDAD COMPLUTENSE DE MADRID,
            Antimicrobial Resistance Unit (ARU), Av/ Puerta de Hierro, s/n,
            28040 (Madrid), Spain
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 01/14/2024 03:36:52
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,734
            CDSs (total)                      :: 5,608
            Genes (coding)                    :: 5,392
            CDSs (with protein)               :: 5,392
            Genes (RNA)                       :: 126
            rRNAs                             :: 9, 8, 8 (5S, 16S, 23S)
            complete rRNAs                    :: 9, 8, 8 (5S, 16S, 23S)
            tRNAs                             :: 86
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 216
            CDSs (without protein)            :: 216
            Pseudo Genes (ambiguous residues) :: 0 of 216
            Pseudo Genes (frameshifted)       :: 114 of 216
            Pseudo Genes (incomplete)         :: 101 of 216
            Pseudo Genes (internal stop)      :: 41 of 216
            Pseudo Genes (multiple problems)  :: 35 of 216
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OV753638.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..4783
                     /organism="Klebsiella quasipneumoniae"
                     /mol_type="genomic DNA"
                     /isolate="BB1501"
                     /db_xref="taxon:1463165"
                     /plasmid="BB1501_3"
     gene            join(4546..4783,1..80)
                     /locus_tag="OZE11_RS28440"
     CDS             join(4546..4783,1..80)
                     /locus_tag="OZE11_RS28440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="WP_023316025.1"
                     /translation="MQQDHEHDDCRIQFRDDWLYQFYKYGKANRKIPTAISASLGRKLD
                     MLNAADKVGDLRSPPGNRFENLNPPLTGYSSIRVNEKYRLIFKWGENGVEDLYLDPHDY
                     R"
                     /name="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            283..639
                     /locus_tag="OZE11_RS28445"
                     /old_locus_tag="VKR_05670"
     CDS             283..639
                     /locus_tag="OZE11_RS28445"
                     /old_locus_tag="VKR_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000075993.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="WP_023316024.1"
                     /translation="MSQATRKPSTVGDIILYEYLEPSGLKINDLAEMLNVHRNSASALV
                     NNNRKLSTDMAFRLAKAFDTTAKFWLNIQQSVDLWEVTSSPRLQEEIDRVIPAHEIIER
                     KHIVDSSEKKHAIA"
                     /name="HigA family addiction module antitoxin"
     gene            complement(<959..1081)
                     /locus_tag="OZE11_RS28710"
                     /pseudo=""
     CDS             complement(<959..1081)
                     /locus_tag="OZE11_RS28710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487656.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /name="replication initiation protein"
     gene            1732..2055
                     /locus_tag="OZE11_RS28450"
                     /old_locus_tag="VKR_05672"
     CDS             1732..2055
                     /locus_tag="OZE11_RS28450"
                     /old_locus_tag="VKR_05672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="WP_163063187.1"
                     /translation="MLTMWVTEGEHRRLLERCDGRPLAAWMRQTCLDEKPARTGKLPSL
                     SPALLRQLAGMGNNLNQIARRVNAGGGTGHDRVQIVAALMAIDAGLERLRHAVLEKGTD
                     DDR"
                     /name="MobC family plasmid mobilization relaxosome protein"
     gene            2264..>2698
                     /locus_tag="OZE11_RS28455"
                     /pseudo=""
     CDS             2264..>2698
                     /locus_tag="OZE11_RS28455"
                     /inference="COORDINATES: protein motif:HMM:NF015397.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo=""
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /name="relaxase/mobilization nuclease domain-containing
                     protein"
     gene            2733..3224
                     /locus_tag="OZE11_RS28460"
                     /old_locus_tag="VKR_05673"
     CDS             2733..3224
                     /locus_tag="OZE11_RS28460"
                     /old_locus_tag="VKR_05673"
                     /inference="COORDINATES: protein motif:HMM:NF016710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeB family mobilization protein"
                     /protein_id="WP_032629998.1"
                     /translation="MSSLLTLAKDLEQQSKAQQQSTGEMLKAAFSEHEQSVRAELSASA
                     RRISDAILAHEQSMSEAMEKNRRSVLRTAGRTWFTILMVSALLIGTSGSILWWQGQQIT
                     DNYTHLRQQEDTLAKMTARTWGVRYQESSDGRRFLILPPGMQTEAIPYDGTTWIRLKQE
                     "
                     /name="MbeB family mobilization protein"
     gene            3231..3446
                     /locus_tag="OZE11_RS28465"
                     /old_locus_tag="VKR_05674"
     CDS             3231..3446
                     /locus_tag="OZE11_RS28465"
                     /old_locus_tag="VKR_05674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
                     /protein_id="WP_000137422.1"
                     /translation="MTELEKQLLSALEQLQQDYSQRLDEWESAFAEWRSMCGLMQRENA
                     VLNERVSDLSTQVLSLSEQLRRLSGN"
                     /name="MbeD family mobilization/exclusion protein"
     gene            complement(4117..4359)
                     /locus_tag="OZE11_RS28470"
                     /old_locus_tag="VKR_05676"
     CDS             complement(4117..4359)
                     /locus_tag="OZE11_RS28470"
                     /old_locus_tag="VKR_05676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_023316026.1"
                     /translation="MALVRSGNKSKIFEADTKFNSVFDTEYKPGETCEYEGIYKCTGCG
                     KEVTIAGGKTIPPQNHHQHTPAQGNIRWQLFVYAQ"
                     /name="hypothetical protein"
     Typing          1444..1617
                     /name="MOBP"
                     /typing="oriT"
                     /tool="MOB-suite"
                     /identity="96.0"
                     /coverage="100.0"
                     /evalue="1.21e-74"
     Typing          complement(969..1477)
                     /name="rep_cluster_2335"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="94.314"
                     /coverage="96.0"
                     /evalue="0.0"
     Typing          1733..2049
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="92.453"
                     /coverage="99.0"
                     /evalue="1.45e-59"
     Typing          2046..3538
                     /name="MOBP"
                     /typing="relaxase"
                     /tool="MOB-suite"
                     /identity="94.2"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 atgagaagta ccgcttgata tttaagtggg gtgaaaacgg agtcgaggat ttgtatctcg
       61 atccacatga ttaccgatag ataacaggtc gtggctgtta tcttataaaa caagtaggtg
      121 aggcgttccc tcacctacat taaaatgtca ttacaaataa tgattaataa aaaaaatgac
      181 gtgactatat ttaagataat tactcatcgc tacagctggt aatagacgaa atacttatct
      241 tcctcatcta acagagagaa gtaaaaaatt taggagtaaa gcatgtccca agcaactaga
      301 aaaccatcaa ctgtagggga tattattctt tatgaatatc tcgaaccaag tggtttaaaa
      361 atcaatgact tggctgaaat gttgaatgtg catagaaact ctgccagtgc tttagttaac
      421 aataatagaa agctgtctac cgatatggct tttaggttgg ctaaagcctt cgataccact
      481 gcaaagttct ggctaaatat acagcagtct gttgatttat gggaggttac tagtagccct
      541 cgattgcaag aagaaataga cagagtgatt cccgctcatg aaatcataga aaggaaacac
      601 attgttgata gttctgagaa gaaacatgct attgcatgat tttttttaaa aaaatataag
      661 ttatccctca aaaagaaggc ttctataact agaagccttc tttttgaggg ataaaaacgc
      721 tcatgttaac tttcttctta cgatcttctt gagatccgtg ctctgtacgc gtaatctctt
      781 gctctgtaaa cgaaaaaacc gcctggggag gcggtttttc gaaggttaag tcagttgggg
      841 aactgcttaa cctggtaact ggcttcagca gagcgcagat accaaatact gtccttccag
      901 tgtagccgta gttaggccac cacttcaaga actctgtagc accgcctaca tacctcgctc
      961 tgctaatcct gttaccagtg gctgctgcca gtggcgtttt gtcgtgtctt tccgggttgg
     1021 actcaagtcg atagttaccg gaacaggcgc agcggtcgga ctgaacgggg ggttcgtgca
     1081 tacagtccag cttggagcga actgcctacc cggaaccgag tgtcaggcgt ggaatgagac
     1141 aaacgcggcc ataacagcgg aatgacaccg gtaaaccgaa aggcaggaac aggagagcgc
     1201 acgagggagc catcaggggg aaacgcctgg tatctttata gtcctgtcgg gtttcgccac
     1261 cactgatttg agcgtcagat tctgtgatgc tcgtcagggg ggcggagcct atggaaaacc
     1321 ggctctgtcg tggccttatc gcttccctgt taagtttctt cctggcatct tccaggaaat
     1381 ttccgccccg ttcgtaagcc cgcaccgctc gccgcagccg aacgaccgag cgcagcgagt
     1441 cagtgagcga ggaagcggaa tatatcctgt atcgcatatt ctgctgacgc gccgttgccg
     1501 ccttttttct cctgccacat gaagcacttc actgatttcc gtatccgtgc caacatatta
     1561 agccagtata cactccgcta gcgctacgtg actggttcag ggctgcgccc cgaaacccgc
     1621 caaaagccac tgacgcgcct gcggcttgtc caaccccgcg ccgaccggga aaggctttcc
     1681 cgcccgtccc ggcgttatca ggaggccggt ttgtcagaga aacggaacaa gatgctcacc
     1741 atgtgggtga cggagggcga gcaccggcgg ctgcttgagc gctgcgacgg caggccgctg
     1801 gcggcgtgga tgcggcagac ctgcctggac gaaaagcctg cgcgcaccgg aaagctcccc
     1861 tcactctcgc cggcgctgct gcgccagctt gccggtatgg gcaataacct gaaccagata
     1921 gcccgccgtg ttaacgccgg cggcggcacc ggccatgaca gggtacagat tgtggcggcg
     1981 ctgatggcca tcgatgccgg gcttgagcgg ctgcggcacg ccgttcttga gaaaggaacg
     2041 gacgatgatc gttaaatttc atccacgcgg tcgcggcggt ggcgccgggc cggtggacta
     2101 tctgctgggt aaagaccggc agcgtgaagg cgccagcgtc ctgcagggga agccggaaga
     2161 agtccgggag ctgattgacg cgtcgcctta cgtgaagaaa tacacctccg gcgtactgtc
     2221 gtttgcggag gccgatctgc ctcccggcca gcgggaaaaa ctgatggcca gcttcgagcg
     2281 ggttctgatg cccggactcg ataaagatca gtacagcatt ctgtgggtgg agcacgcgga
     2341 caaggggcgt ctggagctga actttctgat ccccaatacc gaactgctga ccggcaggcg
     2401 gctccagccg tactacgacc gcgccgaccg gccgcgcatc gatgcctggc agaccatcgt
     2461 gaacggcaga ctggggctgc atgacccgaa cgcgccggaa aaccgccggg cgctggtcac
     2521 gccgtccgga ctgccgaaaa cgaagcagga ggccactgaa gccatcacgc gcggactgct
     2581 gacccttgct tcgtccgggg agctgaaaaa ccgtcaggac gtcactgagg cgctggaacg
     2641 gtcaggtttt gaggtggtgc gcaccacgaa aagcagtatc agcattgccg acccggacgg
     2701 ggggcgaaac atccgactga agggagccat ctatgagcag tcttttaacg ctggcgaagg
     2761 acttagagca gcaatcgaaa gcgcagcagc agagtaccgg cgagatgctg aaagccgcat
     2821 tcagcgagca cgagcagtct gtcagagcgg aactgagcgc aagcgcgagg agaatcagcg
     2881 acgccatcct cgcacacgag cagagtatga gcgaggcgat ggagaaaaac cggcggagcg
     2941 tactgcggac tgccgggcgg acatggttca ccatcctgat ggtgtcagcg ctgctgatcg
     3001 gcacgagcgg gagcatactg tggtggcagg ggcagcagat aaccgacaat tacacgcatc
     3061 ttcgtcagca ggaagatacc ctggcgaaaa tgactgcccg gacgtgggga gtgcgctatc
     3121 aggagagcag cgacggccgg aggtttctta tcctgccgcc cgggatgcaa accgaagcca
     3181 tcccctacga cgggacgaca tggatccgcc tgaaacagga gtagcggaaa atgacagagc
     3241 tggaaaagca gttgctgagc gcattagagc agctacagca ggactactcg caaaggctgg
     3301 acgaatggga gagcgccttc gcggaatggc ggagcatgtg tgggcttatg caacgggaga
     3361 acgcggtgct gaacgagcgc gtgtcggact tgagcacgca ggtgctgagt ttaagcgagc
     3421 agctgcgccg cttgtccggg aactgaatgc catcgagctc cggcagaggg agaatgagta
     3481 tcagaaaaca ctggagctgg agcgccagcc gcagaaaacc taccgcgggc cgacacttta
     3541 aaccatccag gcagctgaca acccgcacga agaggggctc ttatttctcc cgctaaatag
     3601 gttcgtgatc aaaaaggtca cgacttattc aggagcggga aatgaagctg ttaaatctca
     3661 ttgaatcatt gcttaactgc ctgtatctgg cggcggagct gtgggactgg ctggagaagc
     3721 atttgtcggt ttttaaggca ttggcgcgga ttttagtgtg actttaacat ccatgcatct
     3781 ggctgcatga ctatgcacca gtgtaatatt cagcggctgc gtttctggtg ttttttcgtt
     3841 atgtctgtcg ccactttctc gcgtctggca ccggaaacgc agccaacccc gtttcagcgg
     3901 tgcgcccaac ggatgttatg gtaaatcagt atcagctgca gatataaaaa agccgccagg
     3961 ctggcggctt gctgttattt tcgtggcttt cctgcatctg agcgttttcc tctgaccctt
     4021 ccgtcattgt tacggtcacg aggttgagtt ccgccgcctg gtttaggaac gacaacgtgt
     4081 gggttgagtg gtcgacgatc tgccattttc tatacctcac tgagcataaa caaacaattg
     4141 ccaacgaatg ttcccttgcg cgggggtatg ttggtggtgg ttttgtggtg ggattgtttt
     4201 cccgcctgcg atagttactt ctttaccgca accggtacat ttataaatcc cttcatattc
     4261 acatgtttct cccggcttat attcagtgtc aaaaaccgag ttaaacttcg tatctgcttc
     4321 aaaaatcttg cttttgtttc ctgagcgaac aagagccatg caacctccaa attatcattt
     4381 attttgcaca cctgcactgt gcatgagtgc attctacagc atagccattg attgcacaag
     4441 tgcactgtgc tgttgtgcat ttgatatgtt tgctgtacta tatcggaggt aagaaggtga
     4501 tcgaaaaaat tgccaagttg cggcaaaaat tgaggtaaaa gaaaaatgca gcaagatcat
     4561 gaacatgatg attgccgcat tcagtttcga gacgattggc tataccagtt ttacaaatat
     4621 ggtaaagcca atcgaaagat tccaactgcg attagtgctt cattaggtcg caagctggat
     4681 atgctgaatg ctgctgataa agttggagat ttgcggtctc ccccgggaaa ccgatttgag
     4741 aatctcaacc ctccattgac agggtattca tccatacggg tga
//
