LOCUS       NZ_OP242305             2101 bp    DNA     circular CON 23-MAR-2024
DEFINITION  Escherichia coli strain LA170 plasmid pLAO77, complete sequence.
ACCESSION   NZ_OP242305
VERSION     NZ_OP242305.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29363357
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Snaith,A.E., Dunn,S.J., Moran,R.A. and McNally,A.
  TITLE     Plasmids from ESBL+ E. coli from PDR Laos
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Snaith,A.E., Dunn,S.J., Moran,R.A. and McNally,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-AUG-2022) Institute of Microbiology and Infection,
            University of Birmingham, University of Birmingham, Birmingham B15
            2TT, United Kingdom
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Name              :: GCF_028600895.1-RS_2024_03_23
            Annotation Date              :: 03/23/2024 03:21:25
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.7
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OP242305.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LA170"
                     /isolation_source="stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="pLAO77"
     gene            complement(join(1138..2101,1..2))
                     /locus_tag="PUP24_RS00005"
                     /old_locus_tag="ANHOHIHF_00002"
     CDS             complement(join(1138..2101,1..2))
                     /locus_tag="PUP24_RS00005"
                     /old_locus_tag="ANHOHIHF_00002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein rep"
                     /protein_id="WP_001287824.1"
                     /translation="MSEDKFLSDYSPRDAVWDTQRTLTDSVGGIYQTAAEFERYALRMA
                     SCSGLLRFGWSTIMETGETRLRLRSAQFCRVRHCPVCQWRRTLMWQARFYQALPKIVVD
                     YPSSRWLFLTLTVRNCEIGELGTVLTAMNAAFKRMEKRKELSPVQGWIRATEVTRGKDG
                     SAHPHFHCLLMVQPSWFKGKNYVKHERWVELWRDCLRVNYEPNIDIRAVKTKTGEVVAN
                     VAEQLQSAVAETLKYSVKPEDMANDPEWFLELTRQLHKRRFISTGGALKNVLQLDRETN
                     EDLVIADDVGDGTDDGKRTAFVWDSGKRRYKRAPEKDKSD"
                     /name="protein rep"
     gene            complement(868..1134)
                     /locus_tag="PUP24_RS00010"
                     /old_locus_tag="ANHOHIHF_00001"
     CDS             complement(868..1134)
                     /locus_tag="PUP24_RS00010"
                     /old_locus_tag="ANHOHIHF_00001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001024536.1"
                     /translation="MNINIEYLNGNKTIGLFFLRSEAVIPDRFKNLILLIDGLSFGTFG
                     FHPHEGFEDELILYIQKTNERVKTLFVKIDLNGIKFGFLRTHS"
                     /name="hypothetical protein"
     Typing          complement(1479..1710)
                     /name="Col(BS512)"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="100.0"
                     /coverage="100.0"
                     /evalue="2.05e-118"
ORIGIN
        1 attaagcctg ctccgatctg ggcaggctgt gatttgatgt ggtatattca tcacgtacct
       61 gtgcattgcg agccagtaca tgtcaccaga gtttgccgct gaggtgacac attcgaaatg
      121 ttggggagtg ttgacgcact ccccaacgcc gattaaaaac gcctcaattc tgctccattt
      181 tctttgacct gtcaaaaccc actcaaagcc tcgtcattac tgggctaaac cactatttca
      241 tatccgccat ttatccctta agtataaata caaggatcac gcgcgagaat tgcgcaaaaa
      301 ataaccacaa ttttaacccc ccaaaacaag cacccccgaa cggcttaccc caaccttttc
      361 cacacacccg atcaccaaaa cagggaataa aaacaaaacc ctgtcttaca ggtggatggc
      421 ctcacttcgt gaaaccatcc accccgcata agttttttaa tcggtggtgt cgtcaatcac
      481 taaatcggaa ccccaaaggg gacccccacg atttagcatt tgacgagatt aactctcgga
      541 gatggcatca tgcttttaac ggactttaaa aaacggtgaa cggatgcgga ttttaatccg
      601 tgtctgtgag gcgttgagca acgagcaaag cgaggcggta gaaagagagc cagcggcagg
      661 ctcaggacga taatccgggg aaaatgtacc actcgcagag tgttaacatt tgacatcgga
      721 ttgtctatcc tgcattggtg tcgagttggc aaggctgagg ataatgctga ggataatgct
      781 gaggataatg caggatagac agagcactag agattgcatg caatctcgta cctatcacct
      841 cagcctgccg ctggctcttt tccagaacta agaatgcgtt cttaaaaatc caaacttgat
      901 accgtttaaa tctattttca caaaaagagt ttttaccctc tcgtttgttt tctgaatata
      961 taaaattaat tcatcctcaa aaccttcgtg cggatgaaaa ccaaatgtgc caaaacttaa
     1021 tccatcaata agcaaaataa ggtttttaaa cctgtcagga atcaccgctt cacttcttaa
     1081 aaaaaataaa ccaatagtct tatttccatt caggtattca atattaatat tcatacgtta
     1141 atccgattta tccttctcag gggcgcgttt gtaacgccgt ttacctgaat cccagacaaa
     1201 cgccgtccgc ttcccgtcat cagtgccatc ccctacatcg tcggcaatga caagatcctc
     1261 attggtttct cgatccaact ggaggacgtt ttttagcgcc ccaccggtcg agataaaacg
     1321 gcgcttgtga agctgccgcg tcagctcaag aaaccactca ggatcgtttg ccatatcttc
     1381 cggtttaacg gagtatttca gcgtttcagc aaccgcgctt tgcagttgct cggcaacgtt
     1441 ggccacaacc tcacctgtct tagtttttac tgcccgaata tcgatattcg gctcatagtt
     1501 cacccgcaag caatcgcgcc agagttctac ccaacgttcg tgcttaacgt agttcttccc
     1561 tttaaaccaa gaaggttgca ccatcagcag acagtgaaaa tgcggatgtg cgctgccatc
     1621 cttacctcgc gtcacctccg tagccctgat ccacccctga acaggtgata gctcctttcg
     1681 cttttccatt cgcttaaacg ccgcattcat tgctgtaagg actgttccaa gttcacctat
     1741 ctcgcagttc ctgacagtta acgtcagaaa caaccatcgg gaagacgggt aatccacaac
     1801 gattttcggt agagcctgat aaaaacgggc ttgccacatg agggttcttc tccactggca
     1861 gacagggcaa tgacggacac ggcaaaattg cgcactacga agccgtaggc gcgtttctcc
     1921 ggtttccatg atggtagacc aaccaaaacg taacaaaccg ctacaggagg ccatacggag
     1981 tgcatagcgc tcgaattcag cagcagtctg gtagataccc ccgacagaat cggtaagcgt
     2041 gcgctgggta tcccaaactg catcacgggg gctgtagtcc gaaaggaatt tatcttctga
     2101 c
//
