LOCUS       NZ_OP242247             1531 bp    DNA     circular CON 23-MAR-2024
DEFINITION  Escherichia coli strain LA030 plasmid pLAO17, complete sequence.
ACCESSION   NZ_OP242247
VERSION     NZ_OP242247.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN29363336
KEYWORDS    RefSeq.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Snaith,A.E., Dunn,S.J., Moran,R.A. and McNally,A.
  TITLE     Plasmids from ESBL+ E. coli from PDR Laos
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Snaith,A.E., Dunn,S.J., Moran,R.A. and McNally,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-AUG-2022) Institute of Microbiology and Infection,
            University of Birmingham, University of Birmingham, Birmingham B15
            2TT, United Kingdom
COMMENT     ##Assembly-Data-START##
            Assembly Method              :: Unicycler v. 0.4.7
            Sequencing Technology        :: Oxford Nanopore
            ##Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Name              :: GCF_028600315.1-RS_2024_03_23
            Annotation Date              :: 03/23/2024 03:11:14
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.7
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 1
            CDSs (total)                 :: 1
            Genes (coding)               :: 1
            CDSs (with protein)          :: 1
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            OP242247.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LA030"
                     /isolation_source="Stool"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /plasmid="pLAO17"
     gene            complement(join(1497..1531,1..796))
                     /locus_tag="PUP00_RS00005"
     CDS             complement(join(1497..1531,1..796))
                     /locus_tag="PUP00_RS00005"
                     /inference="COORDINATES: ab initio prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_272954251.1"
                     /translation="MKNNHERAKRGEVKGWSKSASRNNTKFLRSVHVPDLTGAAVAFTL
                     TIRDCPPSSEDWKILRENFIKRLRRAGMVRLHWLTEWQQRGVPHLHGIAYFPDAYEPST
                     VIWNWIAVAEKYGCNMRSQHVVPITDMQGWFMYLAKHAGRSETHYQRNPEFVPAGWAKT
                     GRVWGYCGDWPIDEPVTLDASHKAFCALRRICRNWRLADARSANYGTVKDAEKKRRRRI
                     ISARRMLRCNKLGQSASHGVSEWIPLDVSLTAAYWCMASHPMPEVDDSRYQIEI"
                     /name="hypothetical protein"
ORIGIN
        1 ccggcatggg gtgactggcc atacaccagt acgcagcggt aagggaaaca tcgagaggga
       61 tccactcaga aacaccgtgc gaagcggact gaccgagctt attacagcgg agcattctgc
      121 gggcggagat aatacgccgg cggcgcttct tttctgcgtc cttcacagtg ccgtaattgg
      181 ctgaacgggc atcggcaaga cgccagttcc ggcaaatacg cctaagcgca cagaaagcct
      241 tgtgagaggc atcaagcgtc acaggctcat caatgggcca atcaccgcag taaccccaca
      301 cacggcccgt tttagcccat cctgcgggca caaactcagg attgcgctga tagtgagtct
      361 cagagcggcc agcatgctta gccaggtaca tgaaccaacc ctgcatatcc gtgataggta
      421 caacatgctg cgagcgcata ttgcagccgt acttctcagc aacggcgatc caattccaga
      481 ttacagtgga gggttcgtaa gcatcaggaa aataggcgat cccgtgaagg tgaggaacac
      541 cccgctgttg ccattccgta agccagtgaa ggcgcaccat cccagcacgg cgaaggcgct
      601 taatgaaatt ctcgcggagg atcttccaat cctcagatga tggcgggcaa tcacgaatag
      661 ttagcgtaaa cgccacagca gcgccagtga gatcgggaac gtgaacggag cgaaggaatt
      721 tggtgttgtt gcgggaggcg cttttagacc agcctttaac ttccccgcgc ttggcgcgct
      781 catgattatt cttcataggg ggaatcccag ccgtcagacc gttgtgatat aatttcagcg
      841 tagccaagtt gtttccttaa acacattcga gtggttacca agccccggac tgttgacgca
      901 gttgcggggt aattttttgc ctaaaaaaca gggaaacaat aaacccaaaa agattagtta
      961 ggaaggggtc gcggtcagtt atgtaacaac taatcaaggg aagcacctga accgctgaaa
     1021 aatcgaagca ctcaaacact caacgaacag aatcagaatg agacgaacgt gcagtattac
     1081 atacactgca cgaccggcct tttgttgcat tttgctacga gagtccacta ttaaacagag
     1141 tggactacga ttcagaacgg cgagcgcctc ctcgcagagc tgcgggggcg tccccgttcc
     1201 tcaccgtagc agcacgacca tcccccatga cctcacttag acaaaaatcg acaaataagg
     1261 cataccgagc aaaacgggaa caccccacgg catcacctgt agggcagggc ttgcgcacct
     1321 accccacagg caacgccttg aaggggggtt aaaaccggct ttacagggcg atggctcacc
     1381 atgtgaacca tcacccaata caaggttatg gggggtgcag tcgtgcaacc actaaatcgg
     1441 aaccctaaag ggatcccccg atttagcagt tgacgattcg gcggcggcga acgctgtcag
     1501 atttcaatct gatagcgtga gtcgtctact t
//
