LOCUS       NZ_MN251857             2402 bp    DNA     circular CON 08-MAR-2024
DEFINITION  Staphylococcus aureus strain SR168 plasmid pSR168, complete
            sequence.
ACCESSION   NZ_MN251857
VERSION     NZ_MN251857.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN14228874
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Chen,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JUL-2019) Infectious Diseases, Sir Run Run Shaw
            Hospital, School of Medicine, Zhejiang University, 3 East Qingchun
            Road, Hangzhou, Zhejiang 310016, China
COMMENT     ##Assembly-Data-START##
            Assembly Method              :: CLC workbench v. 7.5.1
            Assembly Name                :: pSR168
            Sequencing Technology        :: Illumina
            ##Assembly-Data-END##
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 03/08/2024 01:11:59
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.6
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 2
            CDSs (total)                 :: 2
            Genes (coding)               :: 2
            CDSs (with protein)          :: 2
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            MN251857.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="SR168"
                     /isolation_source="sputum"
                     /db_xref="taxon:1280"
                     /plasmid="pSR168"
     gene            18..752
                     /gene="erm(C)"
                     /locus_tag="HTX28_RS00005"
     ARG             19..749
                     /name="erm(C)"
                     /gene="erm(C)"
                     /gene_name="23S rRNA (adenine(2058)-N(6))-methyltransferase
                     Erm(C)"
                     /tool="amrfinderplus"
                     /drug_class="LINCOSAMIDE/MACROLIDE/STREPTOGRAMIN"
                     /identity="100.0"
                     /coverage="100.0"
     gene            1200..1676
                     /locus_tag="HTX28_RS00010"
     CDS             1200..1676
                     /locus_tag="HTX28_RS00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000664727.1"
                     /GO_process="GO:0006260 - DNA replication [Evidence IEA];
                     GO:0006276 - plasmid maintenance [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication/maintenance protein RepL"
                     /protein_id="WP_000664727.1"
                     /translation="MKERYGTVYKGSQRLIDEESGEVIEVDKLYRKQTSGNFVKAYIVQ
                     LISMLDMIGGKKLKIVNYILDNVHLSNNTMIATTREIAKATGTSLQTVITTLKILEEGN
                     IIKRKTGVLMLNPELLMRGDDQKQKYLLLEFGNFEQEANEKQENALSDYYSFKD"
                     /name="replication/maintenance protein RepL"
     ARG             19..752
                     /name="ErmC"
                     /gene="ErmC"
                     /gene_name="Erm 23S ribosomal RNA methyltransferase"
                     /tool="rgi"
                     /drug_class="macrolide antibiotic; lincosamide antibiotic;
                     streptogramin antibiotic; streptogramin A antibiotic;
                     streptogramin B antibiotic"
                     /identity="99.59"
                     /coverage="100.0"
     Typing          1201..1686
                     /name="rep_cluster_1947"
                     /typing="replicon"
                     /tool="MOB-suite"
                     /identity="99.591"
                     /coverage="100.0"
                     /evalue="0.0"
ORIGIN
        1 aattaaagag ggttataatg aacgagaaaa atataaaaca cagtcaaaac tttattactt
       61 caaaacataa tatagataaa ataatgacaa atataagatt aaatgaacat gataatatct
      121 ttgaaatcgg ctcaggaaaa gggcatttta cccttgaatt agtacagagg tgtaatttcg
      181 taactgccat tgaaatagac cataaattat gcaaaactac agaaaataaa cttgttgatc
      241 acgataattt ccaagtttta aacaaggata tattgcagtt taaatttcct aaaaaccaat
      301 cctataaaat atttggtaat ataccttata acataagtac ggatataata cgcaaaattg
      361 tttttgatag tatagctgat gagatttatt taatcgtgga atacgggttt gctaaaagat
      421 tattaaatac aaaacgctca ttggcattat ttttaatggc agaagttgat atttctatat
      481 taagtatggt tccaagagaa tattttcatc ctaaacctaa agtgaatagc tcacttatca
      541 gattaaatag aaaaaaatca agaatatcac acaaagataa acagaagtat aattatttcg
      601 ttatgaaatg ggttaacaaa gaatacaaga aaatatttac aaaaaatcaa tttaacaatt
      661 ccttaaaaca tgcaggaatt gacgatttaa acaatattag ctttgaacaa ttcttatctc
      721 ttttcaatag ctataaatta tttaataagt aagttaaggg atgcagttta tgcatccctt
      781 aacttgtttt tcgtgtacct attttttgtg aatcgattat gtcttttgcg cattcacttc
      841 ttttctatat aaatatgagc gaagcgaata agcgtcggaa aagcagcaaa aagtttcctt
      901 tttgctgttg gagcatgggg gttcaggggg tgcagtatct gacgtcaatg ccgagcgaaa
      961 gcgagccgaa gggtagcatt tacgttagat aaccccctga tatgctccga cgctttatat
     1021 agaaaagaag attcaactag gtaaaatctt aatataggtt gagatgataa ggtttataag
     1081 gaatttgttt gttctaattt ttcactcatt ttgttctaat ttcttttaac aaatgttctt
     1141 ttttttttag aacagttatg atatagttag aatagtttaa aataaggagt gagaaaaaga
     1201 tgaaagaaag atatggaaca gtctataaag gctctcagag gctcatagac gaagaaagtg
     1261 gagaagtcat agaggtagac aagttatacc gtaaacaaac gtctggtaac ttcgtaaagg
     1321 catatatagt gcaattaata agtatgttag atatgattgg cggaaaaaaa cttaaaatcg
     1381 ttaactatat cctagataat gtccacttaa gtaacaatac aatgatagct acaacaagag
     1441 aaatagcaaa agctacagga acaagtctac aaacagtaat aacaacactt aaaatcttag
     1501 aagaaggaaa tattataaaa agaaaaactg gagtattaat gttaaaccct gaactactaa
     1561 tgagaggcga cgaccaaaaa caaaaatacc tcttactcga atttgggaac tttgagcaag
     1621 aggcaaatga aaaacaagaa aatgcattat ctgattatta ttctttcaag gactagtata
     1681 acataaaatc gtctacaaat agacaaaaaa cctgcacgct taatgtagat caaaagctta
     1741 acgcaaatga aatagattga cctcccaata acaccacgta gttattggga ggtcaatcta
     1801 tgaaatgcga ttaagctttt tctaattcac ataagcgtgc aggtttaaag tacataaaaa
     1861 atataatgaa aaaaagcatc attatactaa cgttatacca acattatact ctcattatac
     1921 taattgctta ttccaatttc ctattggttg gaaccaacag gcgttagtgt gttgttgagt
     1981 tggtactttc atgggattaa tcccatgaaa cccccaacca actcgccaaa gctttggcta
     2041 acacacacgc cattccaacc aatagttttc tcggcataaa gccatgctct gacgcttaaa
     2101 tgcactaatg ccttaaaaaa acattaaagt ctaacacact agacttattt acttcgtaat
     2161 taagtcgtta aaccgtgtgc tctacgacca aaagtataaa acctttaaga actttctttt
     2221 ttcttgtaaa aaaagaaact agataaatct ctcatatctt ttattcaata atcgcatcag
     2281 attgcagtat aaatttaacg atcactcatc atgttcatat ttatcagagc tcgtgctata
     2341 attatactaa ttttattaag tggttataat gaatcgttaa taagcaaaat tcattataac
     2401 ca
//
