LOCUS       NZ_MK388403             1435 bp    DNA     circular CON 21-JUL-2023
DEFINITION  Staphylococcus aureus strain pa2 plasmid pAvY-B1, complete sequence.
ACCESSION   NZ_MK388403
VERSION     NZ_MK388403.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09846912
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 1435)
  AUTHORS   Bukowski,M., Piwowarczyk,R., Madry,A., Zagorski-Przybylo,R.,
            Hydzik,M. and Wladyka,B.
  TITLE     Prevalence of Antibiotic and Heavy Metal Resistance Determinants and
            Virulence-Related Genetic Elements in Plasmids of Staphylococcus
            aureus
  JOURNAL   Front Microbiol 10 (2019) In press
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 1435)
  AUTHORS   Bukowski,M., Hydzik,M., Sabat,A.J. and Wladyka,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JAN-2019) Faculty of Biochemistry, Biophysics and
            Biotechnology, Department of Analytical Biochemistry, Jagiellonian
            University, Gronostajowa 7, Krakow, Malopolskie 30-387, Poland
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/21/2023 01:21:30
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 1
            CDSs (total)                 :: 1
            Genes (coding)               :: 1
            CDSs (with protein)          :: 1
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            MK388403.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1435
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="pa2"
                     /isolation_source="clinical"
                     /host="Farmed red-legged partridge"
                     /db_xref="taxon:1280"
                     /plasmid="pAvY-B1"
                     /geo_loc_name="United Kingdom: Scotland"
                     /collection_date="1997"
     gene            297..1178
                     /locus_tag="D0Y79_RS00005"
                     /old_locus_tag="D0Y79_c00000"
     CDS             297..1178
                     /locus_tag="D0Y79_RS00005"
                     /old_locus_tag="D0Y79_c00000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000532202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_254303966.1"
                     /translation="MIYLEDEKTILDFHKNLTGGRLVVYLTYDQSNDRFGPLKNTYDLK
                     VKSYDNGVYKVCWYKNSRKKSNTSIHQKFNLEKRLKMSKEELEKLEEEQRKSHIFEVKN
                     LIKDYVLCNHFDMFWTLTFDPKKYGGEISDDLAYELMSKFLHNMRRRHKRKSDKPFNYI
                     AVPERHKSGQIHWHMITGNVEPNLVDSGKTYKKQKIYNCTDWQYGFTNVQKVRSKSKVS
                     SYMTKYITKDLLYSPVRKHKAKYWSSKGLKLPKVYAGNYSDLSSILPLYNENGELKPTH
                     SNDVCDIWLFKV"
                     /name="hypothetical protein"
ORIGIN
        1 agcaagcacc aatagaaagg catatagccc aaaggttcca tgttcaaaag gaaattggaa
       61 taaataaaaa agcgctacag gaatagacct gtaacgctct cagtgctata ttatagctaa
      121 aacaaataaa aagagttaca cactccccga ccaaagtttg ttgtgtaaca atgagcttta
      181 tcaacttgta tattactgta tcaggtaaat aaaatcaagt tgataaaatt ggatgtgttg
      241 taactctttt tcaaaataat ttgagaagga gtttttttat tatgagtaga ccgaaaatga
      301 tttatttgga agacgaaaaa acaatcttgg atttccacaa aaatttgacg ggaggacgtt
      361 tggtcgtcta cttgacatac gaccaaagta acgaccgttt tggaccactt aaaaacacat
      421 atgatttgaa ggttaaatcc tatgataacg gcgtttataa ggtctgttgg tacaaaaatt
      481 cacgaaaaaa atctaacact tctatccacc aaaaattcaa tctagaaaag cgcttgaaaa
      541 tgtcaaaaga agagttagaa aaattggaag aggaacaacg aaaaagtcat atttttgagg
      601 ttaaaaattt aattaaagat tatgtattgt gtaatcactt tgatatgttt tggacattaa
      661 catttgatcc gaaaaaatat ggcggagaga ttagtgatga tttagcttat gagcttatga
      721 gtaaattttt gcataatatg agacggagac ataaacgtaa aagtgataag ccgtttaact
      781 atatagcagt gccagaacgt cataagagtg gtcaaataca ttggcatatg ataactggta
      841 atgtagaacc taatttggtt gatagtggta aaacatataa aaagcagaaa atttataatt
      901 gcacagattg gcaatatgga tttacgaatg ttcaaaaagt gcgttcaaaa tcaaaagtga
      961 gtagttacat gactaaatat attactaaag atttgttata tagtcctgta agaaagcata
     1021 aagctaaata ttggagcagt aagggattga agttgcctaa ggtgtatgca ggtaattatt
     1081 ctgatttgag tagtatttta cctctgtata acgagaatgg ggaattaaag ccaacacata
     1141 gcaatgatgt gtgtgatatt tggctattta aagtttaatt ggctgtgagg ctctgaaaac
     1201 gcaaggatgg aatccgtaaa gcgtttgggc agcgctcaga gcctcgcagc cacgcgtgag
     1261 cgttaaacag gtataaaatc attagaatta tgcctaagtg tctcaaatgg cttcctatgc
     1321 gttgtgagaa tgaaattagg atgacattta tgccgagaaa acttttgata tggaaaaggg
     1381 ctatatgcta ttgcgtaagc aaatattggt gagtgattga attgggatta gacca
//
