LOCUS       NZ_MH785240             1442 bp    DNA     circular CON 21-JUL-2023
DEFINITION  Staphylococcus aureus strain ch8 plasmid pAvY, complete sequence.
ACCESSION   NZ_MH785240
VERSION     NZ_MH785240.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN09846907
KEYWORDS    RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
            Staphylococcus.
REFERENCE   1  (bases 1 to 1442)
  AUTHORS   Bukowski,M., Piwowarczyk,R., Madry,A., Zagorski-Przybylo,R.,
            Hydzik,M. and Wladyka,B.
  TITLE     Prevalence of Antibiotic and Heavy Metal Resistance Determinants and
            Virulence-Related Genetic Elements in Plasmids of Staphylococcus
            aureus
  JOURNAL   Front Microbiol 10, 805 (2019)
  REMARK    DOI: 10.3389/fmicb.2019.00805
REFERENCE   2  (bases 1 to 1442)
  AUTHORS   Bukowski,M., Hydzik,M., Sabat,A.J. and Wladyka,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2018) Faculty of Biochemistry, Biophysics and
            Biotechnology, Department of Analytical Biochemistry, Jagiellonian
            University, Gronostajowa 7, Krakow, malopolskie 30-387, Poland
COMMENT     ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI RefSeq
            Annotation Date              :: 07/21/2023 01:07:19
            Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline
            (PGAP)
            Annotation Method :: Best-placed reference protein set; GeneMarkS-2+
            Annotation Software revision :: 6.5
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                :: 1
            CDSs (total)                 :: 1
            Genes (coding)               :: 1
            CDSs (with protein)          :: 1
            Genes (RNA)                  :: 0
            tRNAs                        :: 0
            ncRNAs                       :: 0
            Pseudo Genes (total)         :: 0
            CDSs (without protein)       :: 0
            ##Genome-Annotation-Data-END##
            REFSEQ INFORMATION: The reference sequence is identical to
            MH785240.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1442
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="ch8"
                     /isolation_source="synovial fluid"
                     /host="Broiler chicken"
                     /db_xref="taxon:1280"
                     /plasmid="pAvY"
                     /geo_loc_name="USA: Georgia"
                     /collection_date="1999"
     gene            288..1184
                     /locus_tag="D0Y74_RS00005"
                     /old_locus_tag="D0Y74_b00000"
     CDS             288..1184
                     /locus_tag="D0Y74_RS00005"
                     /old_locus_tag="D0Y74_b00000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000532202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_192960172.1"
                     /translation="MGRDKMIYLEDEKTVLDFHKNLTGGTLVVYLTYDQLNAQNLPLSD
                     SYDLKVKSYDNGVYKVCWYKNSRKKSNTSIHQKFNLEKRLKMSKEELEKLEEEQRKSHI
                     FEVKNLIKDYVLCNHFDMFWTLTFDPKKYGGEVSDELAYDLMRKWLHKMRNTHKRKSDE
                     PFNYIAIPERHKSGQIHWHMLTGYIEPNLIDSGKTFRNQKVYNCIDWQYGFTNVQKVRS
                     KSKVSSYMTKYITKDLLYSPVRKHKRKYWCSKGLALPEVYAGNYSEVADVLPLYDENGQ
                     LNPTHSNDVCDIWLFKV"
                     /name="hypothetical protein"
ORIGIN
        1 agcaagcacc aacagcaata catatagccc aaaggttcca tgttcaaaag gaaattggaa
       61 taaataaaaa agggcgtgcg cagtctgtat tagaccgtac acgctcttaa tgctattata
      121 tagctaaaat aaataaaaaa gagttacagc accctccgac caaagattgt gttgtaacga
      181 gtacttttgt taacttgtat gttactgtat tcggtttgta aaatcaagtt gataaatttg
      241 gaagtgttgt gactcttttt cagtgattgg aaaggagatt ttttattatg ggtcgagata
      301 aaatgattta tttggaagac gaaaaaactg ttttggattt ccacaaaaat ttgacgggag
      361 ggacgttggt cgtctacttg acatacgacc aacttaacgc acaaaattta cccctttctg
      421 actcttatga tttgaaggtt aaatcctatg ataacggcgt ttataaggtc tgttggtaca
      481 aaaattcacg aaaaaaatct aacacttcta tccaccaaaa attcaatcta gaaaagcgct
      541 tgaaaatgtc aaaagaagag ttagaaaaat tggaagagga acaacgaaaa agtcatattt
      601 ttgaggttaa aaatttaatt aaagattatg tattgtgtaa tcactttgat atgttttgga
      661 cattaacatt tgatccgaaa aaatatggcg gtgaggttag tgatgaatta gcttatgatt
      721 tgatgcgtaa gtggcttcat aaaatgagaa atactcataa gcgtaaaagt gatgagccgt
      781 ttaattatat agcgatacca gagcgtcata aaagtggcca aattcactgg catatgttga
      841 ctggttacat tgagccgaat ttgattgata gtggcaagac gtttagaaat cagaaagtat
      901 ataattgcat agactggcaa tatggattta cgaatgttca aaaagtgcgt tcaaaatcaa
      961 aagtgagtag ttacatgact aaatatatta ctaaagattt gttatatagt cctgttagaa
     1021 agcataagcg taagtattgg tgtagcaagg gcttagcatt gcccgaggtg tatgcaggca
     1081 attattctga agtagctgat gttttgccgc tatacgatga aaatgggcag ttaaacccga
     1141 cgcatagcaa tgatgtttgt gatatttggt tattcaaagt gtaaacgtat atgtgcttgc
     1201 gaggcgctga cggagtccat gcgctagtgg aacgtttagc aagcacatat acgcgcgata
     1261 gcgtttatat ttatatataa atatatattt atatgcctga ctgtttatat ttgcttccta
     1321 agcgttgtat aagctctttg tgttgattgt ttatgccgag aaaacttttg atatggaaaa
     1381 tggctatatg ttattacagc tagctgtaaa tgttggtgag tgattgaatg gggattagac
     1441 ca
//
